RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 ITPR2Q14571 2701 aa9.2□□□□□ -0.94
CACNA1A-238ENST00000637276 IGSF10Q6WRI0 2623 aa9.16□□□□□ -0.94
CACNA1A-238ENST00000637276 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
CACNA1A-238ENST00000637276 LRBAP50851 2863 aa9.13□□□□□ -0.95
CACNA1A-238ENST00000637276 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
CACNA1A-238ENST00000637276 CHD9Q3L8U1 2897 aa9.12□□□□□ -0.95
CACNA1A-238ENST00000637276 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
CACNA1A-238ENST00000637276 HIVEP1P15822 2718 aa9.11□□□□□ -0.95
CACNA1A-238ENST00000637276 UTP20O75691 2785 aaKnown RBP9.08□□□□□ -0.96
CACNA1A-238ENST00000637276 ATMQ13315 3056 aa9.08□□□□□ -0.96
CACNA1A-238ENST00000637276 FRYLO94915 3013 aa9.06□□□□□ -0.96
CACNA1A-238ENST00000637276 A6NN06 94 aa9.05□□□□□ -0.96
CACNA1A-238ENST00000637276 ITPR1Q14643 2758 aa9□□□□□ -0.97
CACNA1A-238ENST00000637276 ADGRG4Q8IZF6 3080 aa8.99□□□□□ -0.97
CACNA1A-238ENST00000637276 KRTAP13-2Q52LG2 175 aa8.97□□□□□ -0.97
CACNA1A-238ENST00000637276 NBEAQ8NFP9 2946 aa8.97□□□□□ -0.97
CACNA1A-238ENST00000637276 ZZEF1O43149 2961 aa8.96□□□□□ -0.97
CACNA1A-238ENST00000637276 KRTAP7-1Q8IUC3 87 aa8.93□□□□□ -0.98
CACNA1A-238ENST00000637276 CELSR2Q9HCU4 2923 aa8.92□□□□□ -0.98
CACNA1A-238ENST00000637276 EYSQ5T1H1 3165 aa8.9□□□□□ -0.98
CACNA1A-238ENST00000637276 USP34Q70CQ2 3546 aa8.9□□□□□ -0.98
CACNA1A-238ENST00000637276 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
CACNA1A-238ENST00000637276 ASPMQ8IZT6 3477 aa8.85□□□□□ -0.99
CACNA1A-238ENST00000637276 MYO15AQ9UKN7 3530 aa8.85□□□□□ -0.99
CACNA1A-238ENST00000637276 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
CACNA1A-238ENST00000637276 TNRC18O15417 2968 aaPredicted RBP8.82□□□□□ -1
CACNA1A-238ENST00000637276 FLNCQ14315 2725 aa8.82□□□□□ -1
CACNA1A-238ENST00000637276 SPTBN5Q9NRC6 3674 aaKnown RBP8.8□□□□□ -1
CACNA1A-238ENST00000637276 PRO2289Q9P1D8 64 aa8.76□□□□□ -1.01
CACNA1A-238ENST00000637276 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
CACNA1A-238ENST00000637276 DCHS1Q96JQ0 3298 aa8.74□□□□□ -1.01
CACNA1A-238ENST00000637276 LOC400499M0QZD8 3231 aa8.73□□□□□ -1.01
CACNA1A-238ENST00000637276 DMXL1Q9Y485 3027 aa8.71□□□□□ -1.02
CACNA1A-238ENST00000637276 WDFY3Q8IZQ1 3526 aa8.7□□□□□ -1.02
CACNA1A-238ENST00000637276 RPS29P62273 56 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-238ENST00000637276 TENM4Q6N022 2769 aa8.68□□□□□ -1.02
CACNA1A-238ENST00000637276 DCHS2Q6V1P9 2916 aa8.68□□□□□ -1.02
CACNA1A-238ENST00000637276 XP32Q5T750 250 aa8.66□□□□□ -1.02
CACNA1A-238ENST00000637276 TENM1Q9UKZ4 2725 aa8.65□□□□□ -1.03
CACNA1A-238ENST00000637276 KRTAP13-1Q8IUC0 172 aa8.63□□□□□ -1.03
CACNA1A-238ENST00000637276 CELSR1Q9NYQ6 3014 aa8.61□□□□□ -1.03
CACNA1A-238ENST00000637276 NF1P21359 2839 aa8.61□□□□□ -1.03
CACNA1A-238ENST00000637276 ZFHX4Q86UP3 3567 aa8.58□□□□□ -1.04
CACNA1A-238ENST00000637276 H0YAA0 97 aa8.56□□□□□ -1.04
CACNA1A-238ENST00000637276 NIPBLQ6KC79 2804 aaeCLIP8.49□□□□□ -1.05
CACNA1A-238ENST00000637276 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
CACNA1A-238ENST00000637276 KRTAP12-2P59991 146 aa8.46□□□□□ -1.05
CACNA1A-238ENST00000637276 TENM3Q9P273 2699 aa8.46□□□□□ -1.05
CACNA1A-238ENST00000637276 PKD1L1Q8TDX9 2849 aa8.45□□□□□ -1.06
CACNA1A-238ENST00000637276 FBN2P35556 2912 aa8.42□□□□□ -1.06
CACNA1A-238ENST00000637276 VWFP04275 2813 aa8.4□□□□□ -1.07
CACNA1A-238ENST00000637276 CSMD1Q96PZ7 3565 aa8.38□□□□□ -1.07
CACNA1A-238ENST00000637276 NBPF19A0A087WUL8 3843 aa8.37□□□□□ -1.07
CACNA1A-238ENST00000637276 LAMA5O15230 3695 aa8.36□□□□□ -1.07
CACNA1A-238ENST00000637276 PDZD2O15018 2839 aa8.35□□□□□ -1.07
CACNA1A-238ENST00000637276 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
CACNA1A-238ENST00000637276 KRTAP1-4P0C5Y4 121 aa8.34□□□□□ -1.08
CACNA1A-238ENST00000637276 TGP01266 2768 aa8.32□□□□□ -1.08
CACNA1A-238ENST00000637276 TENM2Q9NT68 2774 aa8.31□□□□□ -1.08
CACNA1A-238ENST00000637276 RELNP78509 3460 aa8.28□□□□□ -1.08
CACNA1A-238ENST00000637276 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
CACNA1A-238ENST00000637276 TPRXLQ17RH7 258 aa8.19□□□□□ -1.1
CACNA1A-238ENST00000637276 CUBNO60494 3623 aa8.17□□□□□ -1.1
CACNA1A-238ENST00000637276 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.11
CACNA1A-238ENST00000637276 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
CACNA1A-238ENST00000637276 ZFHX3Q15911 3703 aa8.02□□□□□ -1.13
CACNA1A-238ENST00000637276 HRNRQ86YZ3 2850 aaPredicted RBP7.98□□□□□ -1.13
CACNA1A-238ENST00000637276 SMG1Q96Q15 3661 aaKnown RBP7.98□□□□□ -1.13
CACNA1A-238ENST00000637276 MXRA5Q9NR99 2828 aa7.96□□□□□ -1.13
CACNA1A-238ENST00000637276 KRTAP21-3Q3LHN1 58 aa7.96□□□□□ -1.14
CACNA1A-238ENST00000637276 SPENQ96T58 3664 aaKnown RBP7.94□□□□□ -1.14
CACNA1A-238ENST00000637276 DMDP11532 3685 aa7.87□□□□□ -1.15
CACNA1A-238ENST00000637276 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
CACNA1A-238ENST00000637276 SVEP1Q4LDE5 3571 aa7.84□□□□□ -1.15
CACNA1A-238ENST00000637276 KRTAP12-1P59990 96 aa7.81□□□□□ -1.16
CACNA1A-238ENST00000637276 COL7A1Q02388 2944 aa7.74□□□□□ -1.17
CACNA1A-238ENST00000637276 FBN1P35555 2871 aaKnown RBP7.69□□□□□ -1.18
CACNA1A-238ENST00000637276 CSMD2Q7Z408 3487 aa7.68□□□□□ -1.18
CACNA1A-238ENST00000637276 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
CACNA1A-238ENST00000637276 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
CACNA1A-238ENST00000637276 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
CACNA1A-238ENST00000637276 MUC3AQ02505 3323 aa7.61□□□□□ -1.19
CACNA1A-238ENST00000637276 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
CACNA1A-238ENST00000637276 FBN3Q75N90 2809 aa7.59□□□□□ -1.19
CACNA1A-238ENST00000637276 KRTAP3-1Q9BYR8 98 aa7.57□□□□□ -1.2
CACNA1A-238ENST00000637276 KRTAP10-12P60413 245 aa7.52□□□□□ -1.2
CACNA1A-238ENST00000637276 CSMD3Q7Z407 3707 aa7.41□□□□□ -1.22
CACNA1A-238ENST00000637276 TRRAPQ9Y4A5 3859 aa7.4□□□□□ -1.22
CACNA1A-238ENST00000637276 VPS13CQ709C8 3753 aa7.37□□□□□ -1.23
CACNA1A-238ENST00000637276 OTOGQ6ZRI0 2925 aa7.34□□□□□ -1.24
CACNA1A-238ENST00000637276 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
CACNA1A-238ENST00000637276 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
CACNA1A-238ENST00000637276 ANK3Q12955 4377 aaKnown RBP7.24□□□□□ -1.25
CACNA1A-238ENST00000637276 KRTAP8-1Q8IUC2 63 aa7.2□□□□□ -1.26
CACNA1A-238ENST00000637276 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
CACNA1A-238ENST00000637276 BSNQ9UPA5 3926 aa7.19□□□□□ -1.26
CACNA1A-238ENST00000637276 INE1O15225 51 aa7.18□□□□□ -1.26
CACNA1A-238ENST00000637276 HUWE1Q7Z6Z7 4374 aaKnown RBP7.1□□□□□ -1.27
CACNA1A-238ENST00000637276 AKAP9Q99996 3911 aa7.08□□□□□ -1.28
CACNA1A-238ENST00000637276 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms