RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	ATM	Q13315	3056 aa		5	□□□□□ -1.61
SPTAN1-223	ENST00000630866	SPATA8	Q6RVD6	105 aa		4.98	□□□□□ -1.61
SPTAN1-223	ENST00000630866	SPEG	Q15772	3267 aa		4.98	□□□□□ -1.61
SPTAN1-223	ENST00000630866	RPS29	P62273	56 aa	Known RBP	4.98	□□□□□ -1.61
SPTAN1-223	ENST00000630866	CYSTM1	Q9H1C7	97 aa		4.97	□□□□□ -1.61
SPTAN1-223	ENST00000630866	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.97	□□□□□ -1.61
SPTAN1-223	ENST00000630866	KALRN	O60229	2985 aa		4.97	□□□□□ -1.61
SPTAN1-223	ENST00000630866	LRBA	P50851	2863 aa		4.95	□□□□□ -1.62
SPTAN1-223	ENST00000630866	MYO15A	Q9UKN7	3530 aa		4.95	□□□□□ -1.62
SPTAN1-223	ENST00000630866	BOD1L1	Q8NFC6	3051 aa		4.94	□□□□□ -1.62
SPTAN1-223	ENST00000630866	NDUFAF8	A1L188	74 aa		4.94	□□□□□ -1.62
SPTAN1-223	ENST00000630866	APC	P25054	2843 aa		4.93	□□□□□ -1.62
SPTAN1-223	ENST00000630866	MUC3A	Q02505	3323 aa		4.93	□□□□□ -1.62
SPTAN1-223	ENST00000630866	KRTAP25-1	Q3LHN0	102 aa		4.91	□□□□□ -1.62
SPTAN1-223	ENST00000630866	NBEA	Q8NFP9	2946 aa		4.91	□□□□□ -1.62
SPTAN1-223	ENST00000630866	KRTAP11-1	Q8IUC1	163 aa		4.9	□□□□□ -1.62
SPTAN1-223	ENST00000630866	ADGRG4	Q8IZF6	3080 aa		4.9	□□□□□ -1.63
SPTAN1-223	ENST00000630866	ZZEF1	O43149	2961 aa		4.89	□□□□□ -1.63
SPTAN1-223	ENST00000630866	C10orf95	Q9H7T3	257 aa		4.88	□□□□□ -1.63
SPTAN1-223	ENST00000630866		A0A1B0GVY2	172 aa		4.87	□□□□□ -1.63
SPTAN1-223	ENST00000630866	KRTAP13-2	Q52LG2	175 aa		4.87	□□□□□ -1.63
SPTAN1-223	ENST00000630866	ASH1L	Q9NR48	2969 aa	Known RBP	4.86	□□□□□ -1.63
SPTAN1-223	ENST00000630866		A8MUU9	505 aa		4.86	□□□□□ -1.63
SPTAN1-223	ENST00000630866	CELSR2	Q9HCU4	2923 aa		4.86	□□□□□ -1.63
SPTAN1-223	ENST00000630866	TNP1	P09430	55 aa		4.85	□□□□□ -1.63
SPTAN1-223	ENST00000630866	KRTAP10-8	P60410	259 aa		4.84	□□□□□ -1.63
SPTAN1-223	ENST00000630866	NOTCH2NL	Q7Z3S9	236 aa		4.84	□□□□□ -1.63
SPTAN1-223	ENST00000630866	ASPM	Q8IZT6	3477 aa		4.83	□□□□□ -1.64
SPTAN1-223	ENST00000630866	NBPF19	A0A087WUL8	3843 aa		4.81	□□□□□ -1.64
SPTAN1-223	ENST00000630866	NIPBL	Q6KC79	2804 aa	eCLIP	4.81	□□□□□ -1.64
SPTAN1-223	ENST00000630866	DCHS1	Q96JQ0	3298 aa		4.81	□□□□□ -1.64
SPTAN1-223	ENST00000630866	KRTAP7-1	Q8IUC3	87 aa		4.81	□□□□□ -1.64
SPTAN1-223	ENST00000630866	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.8	□□□□□ -1.64
SPTAN1-223	ENST00000630866	KRTAP13-1	Q8IUC0	172 aa		4.8	□□□□□ -1.64
SPTAN1-223	ENST00000630866		A8MU10	97 aa		4.79	□□□□□ -1.64
SPTAN1-223	ENST00000630866	DCHS2	Q6V1P9	2916 aa		4.79	□□□□□ -1.64
SPTAN1-223	ENST00000630866	TENM1	Q9UKZ4	2725 aa		4.78	□□□□□ -1.64
SPTAN1-223	ENST00000630866	LOC400499	M0QZD8	3231 aa		4.78	□□□□□ -1.64
SPTAN1-223	ENST00000630866	KRTAP10-10	P60014	251 aa		4.75	□□□□□ -1.65
SPTAN1-223	ENST00000630866		A6NN06	94 aa		4.74	□□□□□ -1.65
SPTAN1-223	ENST00000630866	DMD	P11532	3685 aa		4.74	□□□□□ -1.65
SPTAN1-223	ENST00000630866	LAMA5	O15230	3695 aa		4.74	□□□□□ -1.65
SPTAN1-223	ENST00000630866	NF1	P21359	2839 aa		4.73	□□□□□ -1.65
SPTAN1-223	ENST00000630866	ZAN	Q9Y493	2812 aa		4.72	□□□□□ -1.65
SPTAN1-223	ENST00000630866	ZFHX3	Q15911	3703 aa		4.72	□□□□□ -1.65
SPTAN1-223	ENST00000630866	WDFY3	Q8IZQ1	3526 aa		4.69	□□□□□ -1.66
SPTAN1-223	ENST00000630866	PP632	Q6XCG6	107 aa		4.69	□□□□□ -1.66
SPTAN1-223	ENST00000630866	TENM3	Q9P273	2699 aa		4.68	□□□□□ -1.66
SPTAN1-223	ENST00000630866	XP32	Q5T750	250 aa		4.68	□□□□□ -1.66
SPTAN1-223	ENST00000630866	TPRXL	Q17RH7	258 aa		4.67	□□□□□ -1.66
SPTAN1-223	ENST00000630866	PRO2289	Q9P1D8	64 aa		4.67	□□□□□ -1.66
SPTAN1-223	ENST00000630866	TENM2	Q9NT68	2774 aa		4.66	□□□□□ -1.66
SPTAN1-223	ENST00000630866	KRTAP1-4	P0C5Y4	121 aa		4.64	□□□□□ -1.67
SPTAN1-223	ENST00000630866	CELSR1	Q9NYQ6	3014 aa		4.64	□□□□□ -1.67
SPTAN1-223	ENST00000630866	FBN2	P35556	2912 aa		4.62	□□□□□ -1.67
SPTAN1-223	ENST00000630866	PKD1L1	Q8TDX9	2849 aa		4.61	□□□□□ -1.67
SPTAN1-223	ENST00000630866	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.59	□□□□□ -1.67
SPTAN1-223	ENST00000630866	SMG1	Q96Q15	3661 aa	Known RBP	4.59	□□□□□ -1.67
SPTAN1-223	ENST00000630866	RELN	P78509	3460 aa		4.58	□□□□□ -1.68
SPTAN1-223	ENST00000630866	MXRA5	Q9NR99	2828 aa		4.57	□□□□□ -1.68
SPTAN1-223	ENST00000630866	KRTAP13-3	Q3SY46	172 aa		4.52	□□□□□ -1.69
SPTAN1-223	ENST00000630866	ZFHX4	Q86UP3	3567 aa		4.51	□□□□□ -1.69
SPTAN1-223	ENST00000630866	VWF	P04275	2813 aa		4.51	□□□□□ -1.69
SPTAN1-223	ENST00000630866	PDZD2	O15018	2839 aa		4.44	□□□□□ -1.7
SPTAN1-223	ENST00000630866	CRCT1	Q9UGL9	99 aa		4.43	□□□□□ -1.7
SPTAN1-223	ENST00000630866	TG	P01266	2768 aa		4.41	□□□□□ -1.7
SPTAN1-223	ENST00000630866	SPEN	Q96T58	3664 aa	Known RBP	4.41	□□□□□ -1.7
SPTAN1-223	ENST00000630866		H0YAA0	97 aa		4.34	□□□□□ -1.71
SPTAN1-223	ENST00000630866	FBN1	P35555	2871 aa	Known RBP	4.3	□□□□□ -1.72
SPTAN1-223	ENST00000630866	BSN	Q9UPA5	3926 aa		4.3	□□□□□ -1.72
SPTAN1-223	ENST00000630866	CSMD1	Q96PZ7	3565 aa		4.3	□□□□□ -1.72
SPTAN1-223	ENST00000630866	SRRM2	Q9UQ35	2752 aa	Known RBP	4.29	□□□□□ -1.72
SPTAN1-223	ENST00000630866	OTOG	Q6ZRI0	2925 aa		4.28	□□□□□ -1.72
SPTAN1-223	ENST00000630866	CSMD2	Q7Z408	3487 aa		4.28	□□□□□ -1.72
SPTAN1-223	ENST00000630866	KRTAP12-2	P59991	146 aa		4.24	□□□□□ -1.73
SPTAN1-223	ENST00000630866	COL7A1	Q02388	2944 aa		4.21	□□□□□ -1.74
SPTAN1-223	ENST00000630866	CUBN	O60494	3623 aa		4.18	□□□□□ -1.74
SPTAN1-223	ENST00000630866	FBN3	Q75N90	2809 aa		4.17	□□□□□ -1.74
SPTAN1-223	ENST00000630866	SVEP1	Q4LDE5	3571 aa		4.14	□□□□□ -1.75
SPTAN1-223	ENST00000630866	KRTAP15-1	Q3LI76	137 aa		4.14	□□□□□ -1.75
SPTAN1-223	ENST00000630866	ANK3	Q12955	4377 aa	Known RBP	4.13	□□□□□ -1.75
SPTAN1-223	ENST00000630866	LOR	P23490	312 aa	Predicted RBP	4.13	□□□□□ -1.75
SPTAN1-223	ENST00000630866	KRTAP13-4	Q3LI77	160 aa		4.13	□□□□□ -1.75
SPTAN1-223	ENST00000630866	TRRAP	Q9Y4A5	3859 aa		4.1	□□□□□ -1.75
SPTAN1-223	ENST00000630866	KRTAP10-6	P60371	365 aa	Predicted RBP	4.1	□□□□□ -1.75
SPTAN1-223	ENST00000630866	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.09	□□□□□ -1.76
SPTAN1-223	ENST00000630866	MT1HL1	P0DM35	61 aa		4.09	□□□□□ -1.76
SPTAN1-223	ENST00000630866	MEGF8	Q7Z7M0	2845 aa		4.09	□□□□□ -1.76
SPTAN1-223	ENST00000630866	VPS13C	Q709C8	3753 aa		4.08	□□□□□ -1.76
SPTAN1-223	ENST00000630866	INE1	O15225	51 aa		4.08	□□□□□ -1.76
SPTAN1-223	ENST00000630866	KRTAP4-5	Q9BYR2	181 aa		4.06	□□□□□ -1.76
SPTAN1-223	ENST00000630866	KRTAP12-1	P59990	96 aa		4	□□□□□ -1.77
SPTAN1-223	ENST00000630866	AKAP9	Q99996	3911 aa		3.99	□□□□□ -1.77
SPTAN1-223	ENST00000630866	KRTAP3-1	Q9BYR8	98 aa		3.99	□□□□□ -1.77
SPTAN1-223	ENST00000630866	ALMS1	Q8TCU4	4167 aa		3.96	□□□□□ -1.78
SPTAN1-223	ENST00000630866	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.92	□□□□□ -1.78
SPTAN1-223	ENST00000630866	KRTAP10-4	P60372	401 aa	Predicted RBP	3.9	□□□□□ -1.79
SPTAN1-223	ENST00000630866	KRTAP10-12	P60413	245 aa		3.87	□□□□□ -1.79
SPTAN1-223	ENST00000630866	DNAH1	Q9P2D7	4330 aa		3.82	□□□□□ -1.8
SPTAN1-223	ENST00000630866	KRTAP8-1	Q8IUC2	63 aa		3.79	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms