RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 LAMA2P24043 3122 aaKnown RBP3.58□□□□□ -1.84
CHD2-208ENST00000626874 MKI67P46013 3256 aaKnown RBP3.57□□□□□ -1.84
CHD2-208ENST00000626874 CHD7Q9P2D1 2997 aa3.55□□□□□ -1.84
CHD2-208ENST00000626874 KALRNO60229 2985 aa3.55□□□□□ -1.84
CHD2-208ENST00000626874 LAMA3Q16787 3333 aa3.54□□□□□ -1.84
CHD2-208ENST00000626874 NF1P21359 2839 aa3.54□□□□□ -1.84
CHD2-208ENST00000626874 LRBAP50851 2863 aa3.53□□□□□ -1.84
CHD2-208ENST00000626874 WDFY4Q6ZS81 3184 aa3.51□□□□□ -1.85
CHD2-208ENST00000626874 H0YAA0 97 aa3.5□□□□□ -1.85
CHD2-208ENST00000626874 LAMA1P25391 3075 aa3.49□□□□□ -1.85
CHD2-208ENST00000626874 PRUNE2Q8WUY3 3088 aa3.49□□□□□ -1.85
CHD2-208ENST00000626874 BRCA2P51587 3418 aa3.49□□□□□ -1.85
CHD2-208ENST00000626874 FRYLO94915 3013 aa3.49□□□□□ -1.85
CHD2-208ENST00000626874 REV3LO60673 3130 aa3.46□□□□□ -1.86
CHD2-208ENST00000626874 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
CHD2-208ENST00000626874 TNRC18O15417 2968 aaPredicted RBP3.45□□□□□ -1.86
CHD2-208ENST00000626874 CELSR2Q9HCU4 2923 aa3.45□□□□□ -1.86
CHD2-208ENST00000626874 PDZD2O15018 2839 aa3.44□□□□□ -1.86
CHD2-208ENST00000626874 TGP01266 2768 aa3.43□□□□□ -1.86
CHD2-208ENST00000626874 ASH1LQ9NR48 2969 aaKnown RBP3.41□□□□□ -1.86
CHD2-208ENST00000626874 DCHS2Q6V1P9 2916 aa3.39□□□□□ -1.87
CHD2-208ENST00000626874 VPS13AQ96RL7 3174 aa3.39□□□□□ -1.87
CHD2-208ENST00000626874 SZT2Q5T011 3432 aa3.39□□□□□ -1.87
CHD2-208ENST00000626874 TRIOO75962 3097 aa3.39□□□□□ -1.87
CHD2-208ENST00000626874 DMXL2Q8TDJ6 3036 aa3.38□□□□□ -1.87
CHD2-208ENST00000626874 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
CHD2-208ENST00000626874 COL6A3P12111 3177 aa3.38□□□□□ -1.87
CHD2-208ENST00000626874 TENM2Q9NT68 2774 aa3.38□□□□□ -1.87
CHD2-208ENST00000626874 TACC2O95359 2948 aa3.38□□□□□ -1.87
CHD2-208ENST00000626874 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
CHD2-208ENST00000626874 ZZEF1O43149 2961 aa3.35□□□□□ -1.87
CHD2-208ENST00000626874 COL12A1Q99715 3063 aa3.34□□□□□ -1.88
CHD2-208ENST00000626874 CDH23Q9H251 3354 aa3.33□□□□□ -1.88
CHD2-208ENST00000626874 USP34Q70CQ2 3546 aa3.33□□□□□ -1.88
CHD2-208ENST00000626874 UNC80Q8N2C7 3258 aa3.33□□□□□ -1.88
CHD2-208ENST00000626874 PKD1L1Q8TDX9 2849 aa3.32□□□□□ -1.88
CHD2-208ENST00000626874 CELSR1Q9NYQ6 3014 aa3.31□□□□□ -1.88
CHD2-208ENST00000626874 NBEAQ8NFP9 2946 aa3.31□□□□□ -1.88
CHD2-208ENST00000626874 XIRP2A4UGR9 3374 aa3.28□□□□□ -1.88
CHD2-208ENST00000626874 INE1O15225 51 aa3.28□□□□□ -1.88
CHD2-208ENST00000626874 VCANP13611 3396 aa3.27□□□□□ -1.89
CHD2-208ENST00000626874 VWFP04275 2813 aa3.27□□□□□ -1.89
CHD2-208ENST00000626874 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
CHD2-208ENST00000626874 ATMQ13315 3056 aa3.26□□□□□ -1.89
CHD2-208ENST00000626874 MXRA5Q9NR99 2828 aa3.26□□□□□ -1.89
CHD2-208ENST00000626874 ZANQ9Y493 2812 aa3.24□□□□□ -1.89
CHD2-208ENST00000626874 BOD1L1Q8NFC6 3051 aa3.23□□□□□ -1.89
CHD2-208ENST00000626874 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
CHD2-208ENST00000626874 FBN3Q75N90 2809 aa3.2□□□□□ -1.9
CHD2-208ENST00000626874 FREM2Q5SZK8 3169 aa3.2□□□□□ -1.9
CHD2-208ENST00000626874 ADGRG4Q8IZF6 3080 aa3.2□□□□□ -1.9
CHD2-208ENST00000626874 EYSQ5T1H1 3165 aa3.19□□□□□ -1.9
CHD2-208ENST00000626874 DMXL1Q9Y485 3027 aa3.18□□□□□ -1.9
CHD2-208ENST00000626874 KRTAP23-1A1A580 65 aa3.17□□□□□ -1.9
CHD2-208ENST00000626874 FBN2P35556 2912 aa3.16□□□□□ -1.9
CHD2-208ENST00000626874 CELSR3Q9NYQ7 3312 aa3.16□□□□□ -1.9
CHD2-208ENST00000626874 SRRM2Q9UQ35 2752 aaKnown RBP3.13□□□□□ -1.91
CHD2-208ENST00000626874 COL7A1Q02388 2944 aa3.12□□□□□ -1.91
CHD2-208ENST00000626874 HRNRQ86YZ3 2850 aaPredicted RBP3.11□□□□□ -1.91
CHD2-208ENST00000626874 SPTBN5Q9NRC6 3674 aaKnown RBP3.11□□□□□ -1.91
CHD2-208ENST00000626874 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
CHD2-208ENST00000626874 CFAP47Q6ZTR5 3102 aa3.08□□□□□ -1.92
CHD2-208ENST00000626874 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
CHD2-208ENST00000626874 KRTAP3-1Q9BYR8 98 aa3.07□□□□□ -1.92
CHD2-208ENST00000626874 NBPF19A0A087WUL8 3843 aa3.06□□□□□ -1.92
CHD2-208ENST00000626874 MEGF8Q7Z7M0 2845 aa3.06□□□□□ -1.92
CHD2-208ENST00000626874 MUC3AQ02505 3323 aa3.06□□□□□ -1.92
CHD2-208ENST00000626874 KRTAP10-6P60371 365 aaPredicted RBP3.05□□□□□ -1.92
CHD2-208ENST00000626874 MT1HL1P0DM35 61 aa3.04□□□□□ -1.92
CHD2-208ENST00000626874 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
CHD2-208ENST00000626874 SPEGQ15772 3267 aa3.02□□□□□ -1.93
CHD2-208ENST00000626874 DCHS1Q96JQ0 3298 aa3□□□□□ -1.93
CHD2-208ENST00000626874 DNAH14Q0VDD8 3507 aa2.99□□□□□ -1.93
CHD2-208ENST00000626874 MYO15AQ9UKN7 3530 aa2.98□□□□□ -1.93
CHD2-208ENST00000626874 LOC400499M0QZD8 3231 aa2.97□□□□□ -1.93
CHD2-208ENST00000626874 ZFHX4Q86UP3 3567 aa2.96□□□□□ -1.94
CHD2-208ENST00000626874 ZFHX3Q15911 3703 aa2.95□□□□□ -1.94
CHD2-208ENST00000626874 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
CHD2-208ENST00000626874 ALMS1Q8TCU4 4167 aa2.91□□□□□ -1.94
CHD2-208ENST00000626874 KRTAP10-5P60370 271 aa2.9□□□□□ -1.94
CHD2-208ENST00000626874 WDFY3Q8IZQ1 3526 aa2.9□□□□□ -1.95
CHD2-208ENST00000626874 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
CHD2-208ENST00000626874 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
CHD2-208ENST00000626874 KRTAP3-2Q9BYR7 98 aa2.89□□□□□ -1.95
CHD2-208ENST00000626874 KRTAP3-3Q9BYR6 98 aa2.88□□□□□ -1.95
CHD2-208ENST00000626874 FBN1P35555 2871 aaKnown RBP2.88□□□□□ -1.95
CHD2-208ENST00000626874 LORP23490 312 aaPredicted RBP2.86□□□□□ -1.95
CHD2-208ENST00000626874 DMDP11532 3685 aa2.85□□□□□ -1.95
CHD2-208ENST00000626874 LAMA5O15230 3695 aa2.85□□□□□ -1.95
CHD2-208ENST00000626874 RELNP78509 3460 aa2.84□□□□□ -1.95
CHD2-208ENST00000626874 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.96
CHD2-208ENST00000626874 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.96
CHD2-208ENST00000626874 ASPMQ8IZT6 3477 aa2.82□□□□□ -1.96
CHD2-208ENST00000626874 HUWE1Q7Z6Z7 4374 aaKnown RBP2.82□□□□□ -1.96
CHD2-208ENST00000626874 KRTAP4-5Q9BYR2 181 aa2.8□□□□□ -1.96
CHD2-208ENST00000626874 DNAH1Q9P2D7 4330 aa2.8□□□□□ -1.96
CHD2-208ENST00000626874 SMG1Q96Q15 3661 aaKnown RBP2.8□□□□□ -1.96
CHD2-208ENST00000626874 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
CHD2-208ENST00000626874 TRRAPQ9Y4A5 3859 aa2.74□□□□□ -1.97
CHD2-208ENST00000626874 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms