RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 TENM4Q6N022 2769 aa5.31□□□□□ -1.56
SPTBN1-207ENST00000615901 R4GN34 69 aa5.31□□□□□ -1.56
SPTBN1-207ENST00000615901 KRTAP21-3Q3LHN1 58 aa5.3□□□□□ -1.56
SPTBN1-207ENST00000615901 PKD1L1Q8TDX9 2849 aa5.29□□□□□ -1.56
SPTBN1-207ENST00000615901 KRTAP13-1Q8IUC0 172 aa5.29□□□□□ -1.56
SPTBN1-207ENST00000615901 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
SPTBN1-207ENST00000615901 COL12A1Q99715 3063 aa5.28□□□□□ -1.56
SPTBN1-207ENST00000615901 ROMO1P60602 79 aa5.27□□□□□ -1.57
SPTBN1-207ENST00000615901 ATMQ13315 3056 aa5.27□□□□□ -1.57
SPTBN1-207ENST00000615901 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
SPTBN1-207ENST00000615901 FREM2Q5SZK8 3169 aa5.26□□□□□ -1.57
SPTBN1-207ENST00000615901 KRTAP7-1Q8IUC3 87 aa5.26□□□□□ -1.57
SPTBN1-207ENST00000615901 KRTAP11-1Q8IUC1 163 aa5.25□□□□□ -1.57
SPTBN1-207ENST00000615901 RPL37P61927 97 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-207ENST00000615901 KRTAP13-2Q52LG2 175 aa5.2□□□□□ -1.58
SPTBN1-207ENST00000615901 TENM2Q9NT68 2774 aa5.2□□□□□ -1.58
SPTBN1-207ENST00000615901 M0QZ58 72 aa5.19□□□□□ -1.58
SPTBN1-207ENST00000615901 NOTCH2NLQ7Z3S9 236 aa5.19□□□□□ -1.58
SPTBN1-207ENST00000615901 CDH23Q9H251 3354 aa5.18□□□□□ -1.58
SPTBN1-207ENST00000615901 A6NN06 94 aa5.17□□□□□ -1.58
SPTBN1-207ENST00000615901 KRTAP16-1A8MUX0 517 aa5.17□□□□□ -1.58
SPTBN1-207ENST00000615901 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
SPTBN1-207ENST00000615901 UNC80Q8N2C7 3258 aa5.16□□□□□ -1.58
SPTBN1-207ENST00000615901 DMXL1Q9Y485 3027 aa5.16□□□□□ -1.58
SPTBN1-207ENST00000615901 ADGRG4Q8IZF6 3080 aa5.16□□□□□ -1.58
SPTBN1-207ENST00000615901 SPATA8Q6RVD6 105 aa5.15□□□□□ -1.59
SPTBN1-207ENST00000615901 BOD1L1Q8NFC6 3051 aa5.15□□□□□ -1.59
SPTBN1-207ENST00000615901 SPTBN5Q9NRC6 3674 aaKnown RBP5.15□□□□□ -1.59
SPTBN1-207ENST00000615901 USP34Q70CQ2 3546 aa5.14□□□□□ -1.59
SPTBN1-207ENST00000615901 COL6A3P12111 3177 aa5.1□□□□□ -1.59
SPTBN1-207ENST00000615901 A8MUU9 505 aa5.08□□□□□ -1.6
SPTBN1-207ENST00000615901 SZT2Q5T011 3432 aa5.07□□□□□ -1.6
SPTBN1-207ENST00000615901 COL7A1Q02388 2944 aa5.07□□□□□ -1.6
SPTBN1-207ENST00000615901 EYSQ5T1H1 3165 aa5.07□□□□□ -1.6
SPTBN1-207ENST00000615901 VCANP13611 3396 aa5.07□□□□□ -1.6
SPTBN1-207ENST00000615901 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
SPTBN1-207ENST00000615901 KRTAP1-4P0C5Y4 121 aa4.99□□□□□ -1.61
SPTBN1-207ENST00000615901 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
SPTBN1-207ENST00000615901 FBN1P35555 2871 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-207ENST00000615901 CELSR1Q9NYQ6 3014 aa4.97□□□□□ -1.61
SPTBN1-207ENST00000615901 WDFY3Q8IZQ1 3526 aa4.96□□□□□ -1.61
SPTBN1-207ENST00000615901 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.62
SPTBN1-207ENST00000615901 CFAP47Q6ZTR5 3102 aa4.96□□□□□ -1.62
SPTBN1-207ENST00000615901 A8MU10 97 aa4.92□□□□□ -1.62
SPTBN1-207ENST00000615901 SPEGQ15772 3267 aa4.92□□□□□ -1.62
SPTBN1-207ENST00000615901 XP32Q5T750 250 aa4.92□□□□□ -1.62
SPTBN1-207ENST00000615901 TNP1P09430 55 aa4.9□□□□□ -1.62
SPTBN1-207ENST00000615901 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
SPTBN1-207ENST00000615901 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
SPTBN1-207ENST00000615901 MEGF8Q7Z7M0 2845 aa4.84□□□□□ -1.63
SPTBN1-207ENST00000615901 MYO15AQ9UKN7 3530 aa4.79□□□□□ -1.64
SPTBN1-207ENST00000615901 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
SPTBN1-207ENST00000615901 A0A1B0GVY2 172 aa4.78□□□□□ -1.64
SPTBN1-207ENST00000615901 LOC400499M0QZD8 3231 aa4.77□□□□□ -1.65
SPTBN1-207ENST00000615901 OTOGQ6ZRI0 2925 aa4.77□□□□□ -1.65
SPTBN1-207ENST00000615901 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
SPTBN1-207ENST00000615901 LAMA5O15230 3695 aa4.75□□□□□ -1.65
SPTBN1-207ENST00000615901 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
SPTBN1-207ENST00000615901 ASPMQ8IZT6 3477 aa4.74□□□□□ -1.65
SPTBN1-207ENST00000615901 H0YAA0 97 aa4.73□□□□□ -1.65
SPTBN1-207ENST00000615901 FBN3Q75N90 2809 aa4.73□□□□□ -1.65
SPTBN1-207ENST00000615901 P0C880 135 aa4.73□□□□□ -1.65
SPTBN1-207ENST00000615901 ZFHX3Q15911 3703 aa4.67□□□□□ -1.66
SPTBN1-207ENST00000615901 KRTAP10-8P60410 259 aa4.66□□□□□ -1.66
SPTBN1-207ENST00000615901 SPENQ96T58 3664 aaKnown RBP4.63□□□□□ -1.67
SPTBN1-207ENST00000615901 DMDP11532 3685 aa4.62□□□□□ -1.67
SPTBN1-207ENST00000615901 NBPF19A0A087WUL8 3843 aa4.62□□□□□ -1.67
SPTBN1-207ENST00000615901 CSMD1Q96PZ7 3565 aa4.6□□□□□ -1.67
SPTBN1-207ENST00000615901 DCHS1Q96JQ0 3298 aa4.6□□□□□ -1.67
SPTBN1-207ENST00000615901 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
SPTBN1-207ENST00000615901 SMG1Q96Q15 3661 aaKnown RBP4.57□□□□□ -1.68
SPTBN1-207ENST00000615901 RELNP78509 3460 aa4.55□□□□□ -1.68
SPTBN1-207ENST00000615901 ZFHX4Q86UP3 3567 aa4.53□□□□□ -1.68
SPTBN1-207ENST00000615901 VPS13CQ709C8 3753 aa4.45□□□□□ -1.7
SPTBN1-207ENST00000615901 TRRAPQ9Y4A5 3859 aa4.44□□□□□ -1.7
SPTBN1-207ENST00000615901 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
SPTBN1-207ENST00000615901 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
SPTBN1-207ENST00000615901 ALMS1Q8TCU4 4167 aa4.42□□□□□ -1.7
SPTBN1-207ENST00000615901 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.7
SPTBN1-207ENST00000615901 AKAP9Q99996 3911 aa4.39□□□□□ -1.71
SPTBN1-207ENST00000615901 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
SPTBN1-207ENST00000615901 SVEP1Q4LDE5 3571 aa4.36□□□□□ -1.71
SPTBN1-207ENST00000615901 ANK3Q12955 4377 aaKnown RBP4.36□□□□□ -1.71
SPTBN1-207ENST00000615901 BSNQ9UPA5 3926 aa4.31□□□□□ -1.72
SPTBN1-207ENST00000615901 CUBNO60494 3623 aa4.31□□□□□ -1.72
SPTBN1-207ENST00000615901 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
SPTBN1-207ENST00000615901 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
SPTBN1-207ENST00000615901 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
SPTBN1-207ENST00000615901 INE1O15225 51 aa4.27□□□□□ -1.73
SPTBN1-207ENST00000615901 MUC3AQ02505 3323 aa4.26□□□□□ -1.73
SPTBN1-207ENST00000615901 CSMD2Q7Z408 3487 aa4.2□□□□□ -1.74
SPTBN1-207ENST00000615901 KRTAP3-3Q9BYR6 98 aa4.16□□□□□ -1.74
SPTBN1-207ENST00000615901 HUWE1Q7Z6Z7 4374 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-207ENST00000615901 KRTAP3-2Q9BYR7 98 aa4.16□□□□□ -1.74
SPTBN1-207ENST00000615901 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
SPTBN1-207ENST00000615901 CSMD3Q7Z407 3707 aa4.08□□□□□ -1.76
SPTBN1-207ENST00000615901 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
SPTBN1-207ENST00000615901 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
SPTBN1-207ENST00000615901 KRTAP4-5Q9BYR2 181 aa4.06□□□□□ -1.76
SPTBN1-207ENST00000615901 ZNF469Q96JG9 3925 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms