RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PLA2G1BP04054 148 aaKnown RBP4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 TYMSOSQ8TAI1 123 aa4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 Q96NJ1 140 aa4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 WWC2-AS2Q96NR7 200 aa4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 LYSTQ99698 3801 aa4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 CSMD3Q7Z407 3707 aa4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 A0A087X002 238 aa4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 C8orf87E5RJ46 101 aa4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
SYNPO2-206ENST00000610556 PRKDCP78527 4128 aaKnown RBP4.12□□□□□ -1.75
SYNPO2-206ENST00000610556 SRRM2Q9UQ35 2752 aaKnown RBP4.12□□□□□ -1.75
SYNPO2-206ENST00000610556 LCE6AA0A183 80 aa4.12□□□□□ -1.75
SYNPO2-206ENST00000610556 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
SYNPO2-206ENST00000610556 HRES1P13985 223 aa4.11□□□□□ -1.75
SYNPO2-206ENST00000610556 A8MU10 97 aa4.11□□□□□ -1.75
SYNPO2-206ENST00000610556 TGP01266 2768 aa4.1□□□□□ -1.75
SYNPO2-206ENST00000610556 PLAC8Q9NZF1 115 aa4.1□□□□□ -1.75
SYNPO2-206ENST00000610556 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
SYNPO2-206ENST00000610556 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.76
SYNPO2-206ENST00000610556 DNAH9Q9NYC9 4486 aa4.08□□□□□ -1.76
SYNPO2-206ENST00000610556 HUWE1Q7Z6Z7 4374 aaKnown RBP4.08□□□□□ -1.76
SYNPO2-206ENST00000610556 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
SYNPO2-206ENST00000610556 SPINK7P58062 85 aa4.08□□□□□ -1.76
SYNPO2-206ENST00000610556 Q75L30 129 aa4.08□□□□□ -1.76
SYNPO2-206ENST00000610556 Q6ZRN7 208 aaPredicted RBP4.07□□□□□ -1.76
SYNPO2-206ENST00000610556 Q8N1X5 172 aa4.07□□□□□ -1.76
SYNPO2-206ENST00000610556 COL7A1Q02388 2944 aa4.06□□□□□ -1.76
SYNPO2-206ENST00000610556 Q5W150 140 aa4.06□□□□□ -1.76
SYNPO2-206ENST00000610556 C9orf92A6NGG3 77 aa4.06□□□□□ -1.76
SYNPO2-206ENST00000610556 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
SYNPO2-206ENST00000610556 LINC00483Q53H64 154 aa4.06□□□□□ -1.76
SYNPO2-206ENST00000610556 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
SYNPO2-206ENST00000610556 RBM12B-AS1Q9P1G2 102 aa4.05□□□□□ -1.76
SYNPO2-206ENST00000610556 UQCR11O14957 56 aa4.05□□□□□ -1.76
SYNPO2-206ENST00000610556 KRTAP10-2P60368 255 aa4.05□□□□□ -1.76
SYNPO2-206ENST00000610556 DMBT1Q9UGM3 2413 aaPredicted RBP4.04□□□□□ -1.76
SYNPO2-206ENST00000610556 Q6ZR54 194 aa4.04□□□□□ -1.76
SYNPO2-206ENST00000610556 LCA10Q71F78 164 aa4.04□□□□□ -1.76
SYNPO2-206ENST00000610556 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
SYNPO2-206ENST00000610556 FRAS1Q86XX4 4008 aa4.03□□□□□ -1.76
SYNPO2-206ENST00000610556 LINC00304Q8N9R0 145 aa4.03□□□□□ -1.76
SYNPO2-206ENST00000610556 K7ERS5 55 aa4.02□□□□□ -1.77
SYNPO2-206ENST00000610556 H3BS24 57 aa4.01□□□□□ -1.77
SYNPO2-206ENST00000610556 KRTAP10-1P60331 282 aa4.01□□□□□ -1.77
SYNPO2-206ENST00000610556 PRAC1Q96KF2 57 aa4□□□□□ -1.77
SYNPO2-206ENST00000610556 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
SYNPO2-206ENST00000610556 FBN3Q75N90 2809 aa3.97□□□□□ -1.77
SYNPO2-206ENST00000610556 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.77
SYNPO2-206ENST00000610556 DMAC1Q96GE9 116 aa3.96□□□□□ -1.78
SYNPO2-206ENST00000610556 KRTAP13-2Q52LG2 175 aa3.94□□□□□ -1.78
SYNPO2-206ENST00000610556 FLG2Q5D862 2391 aaPredicted RBP3.94□□□□□ -1.78
SYNPO2-206ENST00000610556 PLECQ15149 4684 aaKnown RBP3.94□□□□□ -1.78
SYNPO2-206ENST00000610556 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
SYNPO2-206ENST00000610556 DNAH2Q9P225 4427 aa3.93□□□□□ -1.78
SYNPO2-206ENST00000610556 A6NN06 94 aa3.92□□□□□ -1.78
SYNPO2-206ENST00000610556 VPS13DQ5THJ4 4388 aa3.92□□□□□ -1.78
SYNPO2-206ENST00000610556 HECTD4Q9Y4D8 3996 aa3.92□□□□□ -1.78
SYNPO2-206ENST00000610556 MEGF8Q7Z7M0 2845 aa3.92□□□□□ -1.78
SYNPO2-206ENST00000610556 J3QL48 77 aa3.91□□□□□ -1.78
SYNPO2-206ENST00000610556 DNAH10Q8IVF4 4471 aa3.91□□□□□ -1.78
SYNPO2-206ENST00000610556 ASB16-AS1Q495Z4 193 aa3.91□□□□□ -1.78
SYNPO2-206ENST00000610556 KMT2AQ03164 3969 aa3.9□□□□□ -1.78
SYNPO2-206ENST00000610556 PKD1P98161 4303 aa3.89□□□□□ -1.79
SYNPO2-206ENST00000610556 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
SYNPO2-206ENST00000610556 HYDINQ4G0P3 5121 aa3.88□□□□□ -1.79
SYNPO2-206ENST00000610556 A0A0D9SG42 100 aa3.88□□□□□ -1.79
SYNPO2-206ENST00000610556 A0A1B0GU33 70 aa3.88□□□□□ -1.79
SYNPO2-206ENST00000610556 FAT2Q9NYQ8 4349 aa3.87□□□□□ -1.79
SYNPO2-206ENST00000610556 CSAG1Q6PB30 78 aa3.86□□□□□ -1.79
SYNPO2-206ENST00000610556 DNAH11Q96DT5 4516 aa3.85□□□□□ -1.79
SYNPO2-206ENST00000610556 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
SYNPO2-206ENST00000610556 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
SYNPO2-206ENST00000610556 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.8
SYNPO2-206ENST00000610556 KRTAP1-4P0C5Y4 121 aa3.82□□□□□ -1.8
SYNPO2-206ENST00000610556 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
SYNPO2-206ENST00000610556 DNAH17Q9UFH2 4485 aa3.8□□□□□ -1.8
SYNPO2-206ENST00000610556 ALMS1Q8TCU4 4167 aa3.8□□□□□ -1.8
SYNPO2-206ENST00000610556 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
SYNPO2-206ENST00000610556 Q6ZSA8 131 aa3.79□□□□□ -1.8
SYNPO2-206ENST00000610556 KRTAP16-1A8MUX0 517 aa3.78□□□□□ -1.8
SYNPO2-206ENST00000610556 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
SYNPO2-206ENST00000610556 DNAH8Q96JB1 4490 aa3.77□□□□□ -1.81
SYNPO2-206ENST00000610556 DNAH5Q8TE73 4624 aa3.77□□□□□ -1.81
SYNPO2-206ENST00000610556 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
SYNPO2-206ENST00000610556 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
SYNPO2-206ENST00000610556 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
SYNPO2-206ENST00000610556 RYR2Q92736 4967 aa3.71□□□□□ -1.81
SYNPO2-206ENST00000610556 Q5VSD8 79 aa3.71□□□□□ -1.82
SYNPO2-206ENST00000610556 S4R3F8 94 aa3.71□□□□□ -1.82
SYNPO2-206ENST00000610556 RYR3Q15413 4870 aa3.71□□□□□ -1.82
SYNPO2-206ENST00000610556 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
SYNPO2-206ENST00000610556 PKHD1L1Q86WI1 4243 aa3.71□□□□□ -1.82
SYNPO2-206ENST00000610556 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
SYNPO2-206ENST00000610556 A8MUU9 505 aa3.7□□□□□ -1.82
SYNPO2-206ENST00000610556 KRTAP21-3Q3LHN1 58 aa3.7□□□□□ -1.82
SYNPO2-206ENST00000610556 RPL37P61927 97 aaKnown RBP3.69□□□□□ -1.82
SYNPO2-206ENST00000610556 C20orf166-AS1Q96NR2 134 aa3.69□□□□□ -1.82
SYNPO2-206ENST00000610556 H0YAA0 97 aa3.68□□□□□ -1.82
SYNPO2-206ENST00000610556 VPS13BQ7Z7G8 4022 aa3.67□□□□□ -1.82
SYNPO2-206ENST00000610556 ROMO1P60602 79 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms