RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 SMG1Q96Q15 3661 aaKnown RBP6.34□□□□□ -1.39
LARP4B-210ENST00000609318 S4R3F8 94 aa6.34□□□□□ -1.4
LARP4B-210ENST00000609318 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
LARP4B-210ENST00000609318 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
LARP4B-210ENST00000609318 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
LARP4B-210ENST00000609318 SEC61BP60468 96 aaKnown RBP6.32□□□□□ -1.4
LARP4B-210ENST00000609318 FAM229BQ4G0N7 80 aa6.31□□□□□ -1.4
LARP4B-210ENST00000609318 SPRR1BP22528 89 aa6.3□□□□□ -1.4
LARP4B-210ENST00000609318 KRTAP4-16G5E9R7 235 aaPredicted RBP6.29□□□□□ -1.4
LARP4B-210ENST00000609318 CELSR1Q9NYQ6 3014 aa6.28□□□□□ -1.4
LARP4B-210ENST00000609318 Q6ZR54 194 aa6.27□□□□□ -1.41
LARP4B-210ENST00000609318 ROMO1P60602 79 aa6.26□□□□□ -1.41
LARP4B-210ENST00000609318 M0QZ58 72 aa6.25□□□□□ -1.41
LARP4B-210ENST00000609318 PANO1I0J062 215 aa6.24□□□□□ -1.41
LARP4B-210ENST00000609318 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
LARP4B-210ENST00000609318 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
LARP4B-210ENST00000609318 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
LARP4B-210ENST00000609318 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
LARP4B-210ENST00000609318 CSMD1Q96PZ7 3565 aa6.21□□□□□ -1.41
LARP4B-210ENST00000609318 OTOGQ6ZRI0 2925 aa6.21□□□□□ -1.42
LARP4B-210ENST00000609318 KRTAP10-2P60368 255 aa6.21□□□□□ -1.42
LARP4B-210ENST00000609318 BSNQ9UPA5 3926 aa6.2□□□□□ -1.42
LARP4B-210ENST00000609318 Q5W150 140 aa6.2□□□□□ -1.42
LARP4B-210ENST00000609318 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
LARP4B-210ENST00000609318 KRTAP7-1Q8IUC3 87 aa6.19□□□□□ -1.42
LARP4B-210ENST00000609318 LINC00472Q9H8W2 130 aa6.19□□□□□ -1.42
LARP4B-210ENST00000609318 TENM3Q9P273 2699 aa6.18□□□□□ -1.42
LARP4B-210ENST00000609318 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
LARP4B-210ENST00000609318 Q5VV11 94 aa6.18□□□□□ -1.42
LARP4B-210ENST00000609318 LCE6AA0A183 80 aa6.16□□□□□ -1.42
LARP4B-210ENST00000609318 FP248Q71RG6 208 aaPredicted RBP6.15□□□□□ -1.43
LARP4B-210ENST00000609318 VWFP04275 2813 aa6.15□□□□□ -1.43
LARP4B-210ENST00000609318 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
LARP4B-210ENST00000609318 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
LARP4B-210ENST00000609318 NBPF19A0A087WUL8 3843 aa6.14□□□□□ -1.43
LARP4B-210ENST00000609318 KRTAP21-3Q3LHN1 58 aa6.13□□□□□ -1.43
LARP4B-210ENST00000609318 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
LARP4B-210ENST00000609318 Q5XG85 94 aa6.08□□□□□ -1.44
LARP4B-210ENST00000609318 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
LARP4B-210ENST00000609318 ASB16-AS1Q495Z4 193 aa6.07□□□□□ -1.44
LARP4B-210ENST00000609318 FBN1P35555 2871 aaKnown RBP6.05□□□□□ -1.44
LARP4B-210ENST00000609318 KRTAP13-1Q8IUC0 172 aa6.05□□□□□ -1.44
LARP4B-210ENST00000609318 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
LARP4B-210ENST00000609318 Q5VSD8 79 aa6.04□□□□□ -1.44
LARP4B-210ENST00000609318 CSMD2Q7Z408 3487 aa6.03□□□□□ -1.44
LARP4B-210ENST00000609318 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
LARP4B-210ENST00000609318 A0A087X002 238 aa6.01□□□□□ -1.45
LARP4B-210ENST00000609318 KRTAP29-1A8MX34 341 aaPredicted RBP6□□□□□ -1.45
LARP4B-210ENST00000609318 ANK3Q12955 4377 aaKnown RBP6□□□□□ -1.45
LARP4B-210ENST00000609318 ZFHX3Q15911 3703 aa5.99□□□□□ -1.45
LARP4B-210ENST00000609318 OXTP01178 125 aa5.96□□□□□ -1.45
LARP4B-210ENST00000609318 NDUFAF8A1L188 74 aa5.96□□□□□ -1.46
LARP4B-210ENST00000609318 NOTCH2NLQ7Z3S9 236 aa5.91□□□□□ -1.46
LARP4B-210ENST00000609318 KRTAP13-2Q52LG2 175 aa5.9□□□□□ -1.46
LARP4B-210ENST00000609318 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
LARP4B-210ENST00000609318 A8MUU9 505 aa5.89□□□□□ -1.47
LARP4B-210ENST00000609318 TNP1P09430 55 aa5.89□□□□□ -1.47
LARP4B-210ENST00000609318 CUBNO60494 3623 aa5.89□□□□□ -1.47
LARP4B-210ENST00000609318 TENM2Q9NT68 2774 aa5.88□□□□□ -1.47
LARP4B-210ENST00000609318 PKD1L1Q8TDX9 2849 aa5.88□□□□□ -1.47
LARP4B-210ENST00000609318 TGP01266 2768 aa5.87□□□□□ -1.47
LARP4B-210ENST00000609318 RPS29P62273 56 aaKnown RBP5.85□□□□□ -1.47
LARP4B-210ENST00000609318 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
LARP4B-210ENST00000609318 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
LARP4B-210ENST00000609318 A8MU10 97 aa5.82□□□□□ -1.48
LARP4B-210ENST00000609318 VPS13CQ709C8 3753 aa5.77□□□□□ -1.49
LARP4B-210ENST00000609318 KRTAP1-4P0C5Y4 121 aa5.76□□□□□ -1.49
LARP4B-210ENST00000609318 A6NN06 94 aa5.74□□□□□ -1.49
LARP4B-210ENST00000609318 ZNF469Q96JG9 3925 aaPredicted RBP5.72□□□□□ -1.49
LARP4B-210ENST00000609318 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
LARP4B-210ENST00000609318 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
LARP4B-210ENST00000609318 AKAP9Q99996 3911 aa5.59□□□□□ -1.51
LARP4B-210ENST00000609318 FBN3Q75N90 2809 aa5.59□□□□□ -1.52
LARP4B-210ENST00000609318 A0A1B0GVY2 172 aa5.59□□□□□ -1.52
LARP4B-210ENST00000609318 MEGF8Q7Z7M0 2845 aa5.56□□□□□ -1.52
LARP4B-210ENST00000609318 P0C880 135 aa5.55□□□□□ -1.52
LARP4B-210ENST00000609318 HUWE1Q7Z6Z7 4374 aaKnown RBP5.51□□□□□ -1.53
LARP4B-210ENST00000609318 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
LARP4B-210ENST00000609318 XP32Q5T750 250 aa5.47□□□□□ -1.53
LARP4B-210ENST00000609318 SRRM2Q9UQ35 2752 aaKnown RBP5.46□□□□□ -1.54
LARP4B-210ENST00000609318 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
LARP4B-210ENST00000609318 COL7A1Q02388 2944 aa5.43□□□□□ -1.54
LARP4B-210ENST00000609318 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
LARP4B-210ENST00000609318 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
LARP4B-210ENST00000609318 DNAH9Q9NYC9 4486 aa5.36□□□□□ -1.55
LARP4B-210ENST00000609318 H0YAA0 97 aa5.27□□□□□ -1.57
LARP4B-210ENST00000609318 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
LARP4B-210ENST00000609318 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
LARP4B-210ENST00000609318 CSMD3Q7Z407 3707 aa5.2□□□□□ -1.58
LARP4B-210ENST00000609318 DNHD1Q96M86 4753 aa5.18□□□□□ -1.58
LARP4B-210ENST00000609318 DNAH1Q9P2D7 4330 aa5.15□□□□□ -1.58
LARP4B-210ENST00000609318 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
LARP4B-210ENST00000609318 VPS13DQ5THJ4 4388 aa5.14□□□□□ -1.59
LARP4B-210ENST00000609318 MT1HL1P0DM35 61 aa5.13□□□□□ -1.59
LARP4B-210ENST00000609318 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
LARP4B-210ENST00000609318 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
LARP4B-210ENST00000609318 DNAH10Q8IVF4 4471 aa5.09□□□□□ -1.59
LARP4B-210ENST00000609318 STARD9Q9P2P6 4700 aa5.09□□□□□ -1.59
LARP4B-210ENST00000609318 ANK2Q01484 3957 aa5.09□□□□□ -1.6
LARP4B-210ENST00000609318 DNAH5Q8TE73 4624 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms