RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 PRUNE2Q8WUY3 3088 aa10.91□□□□□ -0.66
SH3D19-211ENST00000604030 VPS13AQ96RL7 3174 aa10.89□□□□□ -0.67
SH3D19-211ENST00000604030 HIVEP1P15822 2718 aa10.89□□□□□ -0.67
SH3D19-211ENST00000604030 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
SH3D19-211ENST00000604030 TACC2O95359 2948 aa10.77□□□□□ -0.68
SH3D19-211ENST00000604030 UNC80Q8N2C7 3258 aa10.77□□□□□ -0.69
SH3D19-211ENST00000604030 LRBAP50851 2863 aa10.75□□□□□ -0.69
SH3D19-211ENST00000604030 ATMQ13315 3056 aa10.75□□□□□ -0.69
SH3D19-211ENST00000604030 ASH1LQ9NR48 2969 aaKnown RBP10.68□□□□□ -0.7
SH3D19-211ENST00000604030 TENM4Q6N022 2769 aa10.68□□□□□ -0.7
SH3D19-211ENST00000604030 NBEAQ8NFP9 2946 aa10.67□□□□□ -0.7
SH3D19-211ENST00000604030 PRO2289Q9P1D8 64 aa10.64□□□□□ -0.71
SH3D19-211ENST00000604030 COL12A1Q99715 3063 aa10.64□□□□□ -0.71
SH3D19-211ENST00000604030 ADGRG4Q8IZF6 3080 aa10.62□□□□□ -0.71
SH3D19-211ENST00000604030 DMXL2Q8TDJ6 3036 aa10.59□□□□□ -0.71
SH3D19-211ENST00000604030 CELSR2Q9HCU4 2923 aa10.58□□□□□ -0.72
SH3D19-211ENST00000604030 A0A1B0GVY2 172 aa10.58□□□□□ -0.72
SH3D19-211ENST00000604030 XIRP2A4UGR9 3374 aa10.58□□□□□ -0.72
SH3D19-211ENST00000604030 LAMA1P25391 3075 aa10.58□□□□□ -0.72
SH3D19-211ENST00000604030 FREM2Q5SZK8 3169 aa10.54□□□□□ -0.72
SH3D19-211ENST00000604030 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
SH3D19-211ENST00000604030 CDH23Q9H251 3354 aa10.5□□□□□ -0.73
SH3D19-211ENST00000604030 DCHS2Q6V1P9 2916 aa10.48□□□□□ -0.73
SH3D19-211ENST00000604030 ZZEF1O43149 2961 aa10.47□□□□□ -0.73
SH3D19-211ENST00000604030 FRYLO94915 3013 aa10.45□□□□□ -0.74
SH3D19-211ENST00000604030 KRTAP12-2P59991 146 aa10.42□□□□□ -0.74
SH3D19-211ENST00000604030 KRTAP13-4Q3LI77 160 aa10.42□□□□□ -0.74
SH3D19-211ENST00000604030 ZANQ9Y493 2812 aa10.41□□□□□ -0.74
SH3D19-211ENST00000604030 HRNRQ86YZ3 2850 aaPredicted RBP10.38□□□□□ -0.75
SH3D19-211ENST00000604030 TGP01266 2768 aa10.36□□□□□ -0.75
SH3D19-211ENST00000604030 CELSR3Q9NYQ7 3312 aa10.35□□□□□ -0.75
SH3D19-211ENST00000604030 KRTAP12-1P59990 96 aa10.34□□□□□ -0.75
SH3D19-211ENST00000604030 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
SH3D19-211ENST00000604030 EYSQ5T1H1 3165 aa10.29□□□□□ -0.76
SH3D19-211ENST00000604030 BOD1L1Q8NFC6 3051 aa10.29□□□□□ -0.76
SH3D19-211ENST00000604030 SZT2Q5T011 3432 aa10.28□□□□□ -0.76
SH3D19-211ENST00000604030 VCANP13611 3396 aa10.25□□□□□ -0.77
SH3D19-211ENST00000604030 KRTAP3-1Q9BYR8 98 aa10.23□□□□□ -0.77
SH3D19-211ENST00000604030 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.77
SH3D19-211ENST00000604030 CRYBG3Q68DQ2 2970 aa10.2□□□□□ -0.78
SH3D19-211ENST00000604030 REV3LO60673 3130 aa10.19□□□□□ -0.78
SH3D19-211ENST00000604030 TNRC18O15417 2968 aaPredicted RBP10.18□□□□□ -0.78
SH3D19-211ENST00000604030 NF1P21359 2839 aa10.15□□□□□ -0.78
SH3D19-211ENST00000604030 COL6A3P12111 3177 aa10.12□□□□□ -0.79
SH3D19-211ENST00000604030 FBN2P35556 2912 aa10.12□□□□□ -0.79
SH3D19-211ENST00000604030 TENM2Q9NT68 2774 aa10.04□□□□□ -0.8
SH3D19-211ENST00000604030 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-211ENST00000604030 DNAH14Q0VDD8 3507 aa9.99□□□□□ -0.81
SH3D19-211ENST00000604030 SPEGQ15772 3267 aa9.99□□□□□ -0.81
SH3D19-211ENST00000604030 CELSR1Q9NYQ6 3014 aa9.95□□□□□ -0.82
SH3D19-211ENST00000604030 CFAP47Q6ZTR5 3102 aa9.94□□□□□ -0.82
SH3D19-211ENST00000604030 MXRA5Q9NR99 2828 aa9.9□□□□□ -0.82
SH3D19-211ENST00000604030 KRTAP15-1Q3LI76 137 aa9.78□□□□□ -0.84
SH3D19-211ENST00000604030 USP34Q70CQ2 3546 aa9.73□□□□□ -0.85
SH3D19-211ENST00000604030 INE1O15225 51 aa9.73□□□□□ -0.85
SH3D19-211ENST00000604030 PDZD2O15018 2839 aa9.73□□□□□ -0.85
SH3D19-211ENST00000604030 DMXL1Q9Y485 3027 aa9.71□□□□□ -0.86
SH3D19-211ENST00000604030 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
SH3D19-211ENST00000604030 MYO15AQ9UKN7 3530 aa9.6□□□□□ -0.87
SH3D19-211ENST00000604030 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
SH3D19-211ENST00000604030 SPTBN5Q9NRC6 3674 aaKnown RBP9.56□□□□□ -0.88
SH3D19-211ENST00000604030 KRTAP23-1A1A580 65 aa9.54□□□□□ -0.88
SH3D19-211ENST00000604030 PKD1L1Q8TDX9 2849 aa9.53□□□□□ -0.88
SH3D19-211ENST00000604030 LOC400499M0QZD8 3231 aa9.5□□□□□ -0.89
SH3D19-211ENST00000604030 MT1HL1P0DM35 61 aa9.49□□□□□ -0.89
SH3D19-211ENST00000604030 MUC3AQ02505 3323 aa9.45□□□□□ -0.9
SH3D19-211ENST00000604030 VWFP04275 2813 aa9.41□□□□□ -0.9
SH3D19-211ENST00000604030 KRTAP10-12P60413 245 aa9.35□□□□□ -0.91
SH3D19-211ENST00000604030 KRTAP10-4P60372 401 aaPredicted RBP9.31□□□□□ -0.92
SH3D19-211ENST00000604030 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
SH3D19-211ENST00000604030 MEGF8Q7Z7M0 2845 aa9.24□□□□□ -0.93
SH3D19-211ENST00000604030 OTOGQ6ZRI0 2925 aa9.18□□□□□ -0.94
SH3D19-211ENST00000604030 DCHS1Q96JQ0 3298 aa9.18□□□□□ -0.94
SH3D19-211ENST00000604030 KRTAP12-3P60328 96 aa9.15□□□□□ -0.94
SH3D19-211ENST00000604030 WDFY3Q8IZQ1 3526 aa9.15□□□□□ -0.94
SH3D19-211ENST00000604030 ASPMQ8IZT6 3477 aa9.1□□□□□ -0.95
SH3D19-211ENST00000604030 FBN1P35555 2871 aaKnown RBP9.09□□□□□ -0.95
SH3D19-211ENST00000604030 ANK3Q12955 4377 aaKnown RBP9.07□□□□□ -0.96
SH3D19-211ENST00000604030 LAMA5O15230 3695 aa9.04□□□□□ -0.96
SH3D19-211ENST00000604030 RELNP78509 3460 aa9.03□□□□□ -0.96
SH3D19-211ENST00000604030 DMDP11532 3685 aa8.97□□□□□ -0.97
SH3D19-211ENST00000604030 LCE3AQ5TA76 89 aa8.97□□□□□ -0.97
SH3D19-211ENST00000604030 SRRM2Q9UQ35 2752 aaKnown RBP8.94□□□□□ -0.98
SH3D19-211ENST00000604030 COL7A1Q02388 2944 aa8.89□□□□□ -0.99
SH3D19-211ENST00000604030 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
SH3D19-211ENST00000604030 ZFHX4Q86UP3 3567 aa8.78□□□□□ -1
SH3D19-211ENST00000604030 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
SH3D19-211ENST00000604030 CRCT1Q9UGL9 99 aa8.73□□□□□ -1.01
SH3D19-211ENST00000604030 NBPF19A0A087WUL8 3843 aa8.71□□□□□ -1.01
SH3D19-211ENST00000604030 HUWE1Q7Z6Z7 4374 aaKnown RBP8.69□□□□□ -1.02
SH3D19-211ENST00000604030 ALMS1Q8TCU4 4167 aa8.65□□□□□ -1.02
SH3D19-211ENST00000604030 SMG1Q96Q15 3661 aaKnown RBP8.6□□□□□ -1.03
SH3D19-211ENST00000604030 CSMD1Q96PZ7 3565 aa8.59□□□□□ -1.03
SH3D19-211ENST00000604030 CUBNO60494 3623 aa8.48□□□□□ -1.05
SH3D19-211ENST00000604030 TRRAPQ9Y4A5 3859 aa8.47□□□□□ -1.05
SH3D19-211ENST00000604030 ZFHX3Q15911 3703 aa8.42□□□□□ -1.06
SH3D19-211ENST00000604030 KRTAP8-1Q8IUC2 63 aa8.42□□□□□ -1.06
SH3D19-211ENST00000604030 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
SH3D19-211ENST00000604030 DNAH2Q9P225 4427 aa8.4□□□□□ -1.07
SH3D19-211ENST00000604030 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms