RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869	SRRM2	Q9UQ35	2752 aa	Known RBP	11.59	□□□□□ -0.55
STRN4-222	ENST00000601869	APLN	Q9ULZ1	77 aa		11.59	□□□□□ -0.55
STRN4-222	ENST00000601869	ALMS1	Q8TCU4	4167 aa		11.58	□□□□□ -0.56
STRN4-222	ENST00000601869	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.58	□□□□□ -0.56
STRN4-222	ENST00000601869	NOTCH2NL	Q7Z3S9	236 aa		11.57	□□□□□ -0.56
STRN4-222	ENST00000601869	SPACA4	Q8TDM5	124 aa		11.57	□□□□□ -0.56
STRN4-222	ENST00000601869	DNAH10	Q8IVF4	4471 aa		11.56	□□□□□ -0.56
STRN4-222	ENST00000601869		Q5W150	140 aa		11.55	□□□□□ -0.56
STRN4-222	ENST00000601869	C8orf87	E5RJ46	101 aa		11.55	□□□□□ -0.56
STRN4-222	ENST00000601869	PANO1	I0J062	215 aa		11.55	□□□□□ -0.56
STRN4-222	ENST00000601869	CSMD3	Q7Z407	3707 aa		11.53	□□□□□ -0.56
STRN4-222	ENST00000601869	SPATA8	Q6RVD6	105 aa		11.52	□□□□□ -0.56
STRN4-222	ENST00000601869		A0A1B0GU69	56 aa		11.51	□□□□□ -0.57
STRN4-222	ENST00000601869	DNAH7	Q8WXX0	4024 aa		11.48	□□□□□ -0.57
STRN4-222	ENST00000601869	PLEC	Q15149	4684 aa	Known RBP	11.48	□□□□□ -0.57
STRN4-222	ENST00000601869	IGLV5-52	A0A0A0MRZ9	124 aa		11.46	□□□□□ -0.57
STRN4-222	ENST00000601869	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.46	□□□□□ -0.57
STRN4-222	ENST00000601869	RTL8C	O15255	209 aa		11.45	□□□□□ -0.58
STRN4-222	ENST00000601869	ZNF861P	O60384	105 aa		11.45	□□□□□ -0.58
STRN4-222	ENST00000601869	NBDY	A0A0U1RRE5	68 aa		11.44	□□□□□ -0.58
STRN4-222	ENST00000601869	NUPR2	A6NF83	97 aa		11.44	□□□□□ -0.58
STRN4-222	ENST00000601869	FAM229A	H3BQW9	127 aa		11.44	□□□□□ -0.58
STRN4-222	ENST00000601869		Q6ZRN7	208 aa	Predicted RBP	11.44	□□□□□ -0.58
STRN4-222	ENST00000601869	PRAC1	Q96KF2	57 aa		11.43	□□□□□ -0.58
STRN4-222	ENST00000601869	LINC01554	Q52M75	96 aa		11.42	□□□□□ -0.58
STRN4-222	ENST00000601869	UQCR11	O14957	56 aa		11.41	□□□□□ -0.58
STRN4-222	ENST00000601869	PSORS1C2	Q9UIG4	136 aa		11.41	□□□□□ -0.58
STRN4-222	ENST00000601869	SPINK6	Q6UWN8	80 aa		11.4	□□□□□ -0.58
STRN4-222	ENST00000601869	PRKDC	P78527	4128 aa	Known RBP	11.4	□□□□□ -0.58
STRN4-222	ENST00000601869	MIR22HG	Q0VDD5	57 aa		11.39	□□□□□ -0.59
STRN4-222	ENST00000601869	IGKV2-30	P06310	120 aa		11.37	□□□□□ -0.59
STRN4-222	ENST00000601869	STARD9	Q9P2P6	4700 aa		11.35	□□□□□ -0.59
STRN4-222	ENST00000601869	ADM2	Q7Z4H4	148 aa		11.33	□□□□□ -0.59
STRN4-222	ENST00000601869	ANAPC11	Q9NYG5	84 aa		11.33	□□□□□ -0.59
STRN4-222	ENST00000601869	SSBP3-AS1	Q7Z2R9	100 aa		11.32	□□□□□ -0.6
STRN4-222	ENST00000601869	MEGF8	Q7Z7M0	2845 aa		11.31	□□□□□ -0.6
STRN4-222	ENST00000601869	VPS13D	Q5THJ4	4388 aa		11.31	□□□□□ -0.6
STRN4-222	ENST00000601869	DNHD1	Q96M86	4753 aa		11.28	□□□□□ -0.6
STRN4-222	ENST00000601869	C4orf48	Q5BLP8	95 aa		11.28	□□□□□ -0.6
STRN4-222	ENST00000601869	CIRBP-AS1	Q8TBR5	109 aa		11.27	□□□□□ -0.61
STRN4-222	ENST00000601869		A0A087WTM6	91 aa		11.27	□□□□□ -0.61
STRN4-222	ENST00000601869	RETNLB	Q9BQ08	111 aa		11.26	□□□□□ -0.61
STRN4-222	ENST00000601869	IGLV7-43	P04211	117 aa		11.23	□□□□□ -0.61
STRN4-222	ENST00000601869	DNAH8	Q96JB1	4490 aa		11.19	□□□□□ -0.62
STRN4-222	ENST00000601869	KMT2A	Q03164	3969 aa		11.15	□□□□□ -0.62
STRN4-222	ENST00000601869	IGKV2D-30	A0A075B6S6	120 aa		11.15	□□□□□ -0.63
STRN4-222	ENST00000601869	KRTAP16-1	A8MUX0	517 aa		11.15	□□□□□ -0.63
STRN4-222	ENST00000601869	DNAH2	Q9P225	4427 aa		11.13	□□□□□ -0.63
STRN4-222	ENST00000601869	HECTD4	Q9Y4D8	3996 aa		11.12	□□□□□ -0.63
STRN4-222	ENST00000601869	CSAG1	Q6PB30	78 aa		11.11	□□□□□ -0.63
STRN4-222	ENST00000601869	DNAH17	Q9UFH2	4485 aa		11.05	□□□□□ -0.64
STRN4-222	ENST00000601869	FBN3	Q75N90	2809 aa		11.05	□□□□□ -0.64
STRN4-222	ENST00000601869	TG	P01266	2768 aa		11.03	□□□□□ -0.64
STRN4-222	ENST00000601869	C1orf134	Q5TEV5	83 aa		11.02	□□□□□ -0.65
STRN4-222	ENST00000601869	FRAS1	Q86XX4	4008 aa		11.01	□□□□□ -0.65
STRN4-222	ENST00000601869	LY6G6C	O95867	125 aa		11	□□□□□ -0.65
STRN4-222	ENST00000601869		H3BS24	57 aa		10.97	□□□□□ -0.65
STRN4-222	ENST00000601869	KRTAP13-2	Q52LG2	175 aa		10.95	□□□□□ -0.66
STRN4-222	ENST00000601869	DNAH6	Q9C0G6	4158 aa		10.93	□□□□□ -0.66
STRN4-222	ENST00000601869		A8MUU9	505 aa		10.9	□□□□□ -0.66
STRN4-222	ENST00000601869	KRTAP21-3	Q3LHN1	58 aa		10.87	□□□□□ -0.67
STRN4-222	ENST00000601869	SPINK1	P00995	79 aa		10.85	□□□□□ -0.67
STRN4-222	ENST00000601869	KRTAP25-1	Q3LHN0	102 aa		10.84	□□□□□ -0.67
STRN4-222	ENST00000601869		H0YAA0	97 aa		10.83	□□□□□ -0.68
STRN4-222	ENST00000601869		Q6ZSA8	131 aa		10.83	□□□□□ -0.68
STRN4-222	ENST00000601869	DNAH5	Q8TE73	4624 aa		10.82	□□□□□ -0.68
STRN4-222	ENST00000601869	DNAH11	Q96DT5	4516 aa		10.82	□□□□□ -0.68
STRN4-222	ENST00000601869	KRTAP10-2	P60368	255 aa		10.81	□□□□□ -0.68
STRN4-222	ENST00000601869		Q8N1X5	172 aa		10.8	□□□□□ -0.68
STRN4-222	ENST00000601869	LINC00304	Q8N9R0	145 aa		10.77	□□□□□ -0.69
STRN4-222	ENST00000601869	KRTAP1-4	P0C5Y4	121 aa		10.74	□□□□□ -0.69
STRN4-222	ENST00000601869		A0A1B0GU33	70 aa		10.74	□□□□□ -0.69
STRN4-222	ENST00000601869	HYDIN	Q4G0P3	5121 aa		10.73	□□□□□ -0.69
STRN4-222	ENST00000601869	FAT2	Q9NYQ8	4349 aa		10.72	□□□□□ -0.69
STRN4-222	ENST00000601869	PKD1	P98161	4303 aa		10.72	□□□□□ -0.69
STRN4-222	ENST00000601869	H1FX-AS1	Q4G0G2	97 aa		10.7	□□□□□ -0.7
STRN4-222	ENST00000601869	ROMO1	P60602	79 aa		10.69	□□□□□ -0.7
STRN4-222	ENST00000601869	RPS29	P62273	56 aa	Known RBP	10.68	□□□□□ -0.7
STRN4-222	ENST00000601869	TYMSOS	Q8TAI1	123 aa		10.68	□□□□□ -0.7
STRN4-222	ENST00000601869	KRTAP10-1	P60331	282 aa		10.67	□□□□□ -0.7
STRN4-222	ENST00000601869		K7ERS5	55 aa		10.64	□□□□□ -0.71
STRN4-222	ENST00000601869	LRP1B	Q9NZR2	4599 aa		10.61	□□□□□ -0.71
STRN4-222	ENST00000601869	C20orf166-AS1	Q96NR2	134 aa		10.54	□□□□□ -0.72
STRN4-222	ENST00000601869	SACS	Q9NZJ4	4579 aa		10.54	□□□□□ -0.72
STRN4-222	ENST00000601869	KRTAP3-1	Q9BYR8	98 aa		10.52	□□□□□ -0.73
STRN4-222	ENST00000601869	VPS13B	Q7Z7G8	4022 aa		10.48	□□□□□ -0.73
STRN4-222	ENST00000601869	PKHD1	P08F94	4074 aa		10.45	□□□□□ -0.74
STRN4-222	ENST00000601869	COX6B2	Q6YFQ2	88 aa		10.43	□□□□□ -0.74
STRN4-222	ENST00000601869	DYNC1H1	Q14204	4646 aa	Known RBP	10.33	□□□□□ -0.76
STRN4-222	ENST00000601869	C9orf92	A6NGG3	77 aa		10.31	□□□□□ -0.76
STRN4-222	ENST00000601869	RPL37	P61927	97 aa	Known RBP	10.31	□□□□□ -0.76
STRN4-222	ENST00000601869		P0C880	135 aa		10.29	□□□□□ -0.76
STRN4-222	ENST00000601869		A0A1B0GVY2	172 aa		10.29	□□□□□ -0.76
STRN4-222	ENST00000601869	CRIPT	Q9P021	101 aa		10.27	□□□□□ -0.77
STRN4-222	ENST00000601869	SMR3B	P02814	79 aa	Predicted RBP	10.24	□□□□□ -0.77
STRN4-222	ENST00000601869	APOB	P04114	4563 aa	Known RBP	10.21	□□□□□ -0.78
STRN4-222	ENST00000601869	RYR2	Q92736	4967 aa		10.21	□□□□□ -0.78
STRN4-222	ENST00000601869	FAT1	Q14517	4588 aa		10.17	□□□□□ -0.78
STRN4-222	ENST00000601869	KRTAP10-6	P60371	365 aa	Predicted RBP	10.17	□□□□□ -0.78
STRN4-222	ENST00000601869	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms