RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 LINC01558Q9Y6Z2 57 aa6.07□□□□□ -1.44
SEH1L-208ENST00000590843 MXRA5Q9NR99 2828 aa6.07□□□□□ -1.44
SEH1L-208ENST00000590843 DMXL2Q8TDJ6 3036 aa6.05□□□□□ -1.44
SEH1L-208ENST00000590843 LAMA1P25391 3075 aa6.03□□□□□ -1.44
SEH1L-208ENST00000590843 NF1P21359 2839 aa6.01□□□□□ -1.45
SEH1L-208ENST00000590843 PRO0628Q9UI54 55 aa6□□□□□ -1.45
SEH1L-208ENST00000590843 KALRNO60229 2985 aa6□□□□□ -1.45
SEH1L-208ENST00000590843 FBN3Q75N90 2809 aa5.98□□□□□ -1.45
SEH1L-208ENST00000590843 Q5VV11 94 aa5.96□□□□□ -1.46
SEH1L-208ENST00000590843 ROMO1P60602 79 aa5.95□□□□□ -1.46
SEH1L-208ENST00000590843 ZZEF1O43149 2961 aa5.95□□□□□ -1.46
SEH1L-208ENST00000590843 UNC80Q8N2C7 3258 aa5.94□□□□□ -1.46
SEH1L-208ENST00000590843 DCHS2Q6V1P9 2916 aa5.91□□□□□ -1.46
SEH1L-208ENST00000590843 PDZD2O15018 2839 aa5.91□□□□□ -1.46
SEH1L-208ENST00000590843 CELSR2Q9HCU4 2923 aa5.87□□□□□ -1.47
SEH1L-208ENST00000590843 BRCA2P51587 3418 aa5.87□□□□□ -1.47
SEH1L-208ENST00000590843 COL6A3P12111 3177 aa5.86□□□□□ -1.47
SEH1L-208ENST00000590843 LAMA2P24043 3122 aaKnown RBP5.86□□□□□ -1.47
SEH1L-208ENST00000590843 FBN2P35556 2912 aa5.86□□□□□ -1.47
SEH1L-208ENST00000590843 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
SEH1L-208ENST00000590843 ZANQ9Y493 2812 aa5.8□□□□□ -1.48
SEH1L-208ENST00000590843 OTOGQ6ZRI0 2925 aa5.79□□□□□ -1.48
SEH1L-208ENST00000590843 PKD1L1Q8TDX9 2849 aa5.78□□□□□ -1.48
SEH1L-208ENST00000590843 VPS13AQ96RL7 3174 aa5.78□□□□□ -1.48
SEH1L-208ENST00000590843 DMXL1Q9Y485 3027 aa5.78□□□□□ -1.48
SEH1L-208ENST00000590843 SZT2Q5T011 3432 aa5.78□□□□□ -1.48
SEH1L-208ENST00000590843 MT1HL1P0DM35 61 aa5.77□□□□□ -1.49
SEH1L-208ENST00000590843 A6NN06 94 aa5.77□□□□□ -1.49
SEH1L-208ENST00000590843 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
SEH1L-208ENST00000590843 KRTAP16-1A8MUX0 517 aa5.71□□□□□ -1.49
SEH1L-208ENST00000590843 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
SEH1L-208ENST00000590843 XIRP2A4UGR9 3374 aa5.7□□□□□ -1.5
SEH1L-208ENST00000590843 KRTAP4-5Q9BYR2 181 aa5.68□□□□□ -1.5
SEH1L-208ENST00000590843 CDH23Q9H251 3354 aa5.67□□□□□ -1.5
SEH1L-208ENST00000590843 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
SEH1L-208ENST00000590843 HRNRQ86YZ3 2850 aaPredicted RBP5.66□□□□□ -1.5
SEH1L-208ENST00000590843 ADGRG4Q8IZF6 3080 aa5.65□□□□□ -1.51
SEH1L-208ENST00000590843 BOD1L1Q8NFC6 3051 aa5.64□□□□□ -1.51
SEH1L-208ENST00000590843 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
SEH1L-208ENST00000590843 H0YAA0 97 aa5.61□□□□□ -1.51
SEH1L-208ENST00000590843 TGP01266 2768 aa5.57□□□□□ -1.52
SEH1L-208ENST00000590843 CELSR1Q9NYQ6 3014 aa5.55□□□□□ -1.52
SEH1L-208ENST00000590843 A8MU10 97 aa5.55□□□□□ -1.52
SEH1L-208ENST00000590843 VWFP04275 2813 aa5.53□□□□□ -1.52
SEH1L-208ENST00000590843 USP34Q70CQ2 3546 aa5.53□□□□□ -1.52
SEH1L-208ENST00000590843 VCANP13611 3396 aa5.49□□□□□ -1.53
SEH1L-208ENST00000590843 KRTAP10-4P60372 401 aaPredicted RBP5.49□□□□□ -1.53
SEH1L-208ENST00000590843 FBN1P35555 2871 aaKnown RBP5.48□□□□□ -1.53
SEH1L-208ENST00000590843 CFAP47Q6ZTR5 3102 aa5.47□□□□□ -1.53
SEH1L-208ENST00000590843 ALMS1Q8TCU4 4167 aa5.46□□□□□ -1.54
SEH1L-208ENST00000590843 FREM2Q5SZK8 3169 aa5.45□□□□□ -1.54
SEH1L-208ENST00000590843 SPTBN5Q9NRC6 3674 aaKnown RBP5.43□□□□□ -1.54
SEH1L-208ENST00000590843 P0C880 135 aa5.39□□□□□ -1.55
SEH1L-208ENST00000590843 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
SEH1L-208ENST00000590843 ANK3Q12955 4377 aaKnown RBP5.35□□□□□ -1.55
SEH1L-208ENST00000590843 SRRM2Q9UQ35 2752 aaKnown RBP5.31□□□□□ -1.56
SEH1L-208ENST00000590843 NBPF19A0A087WUL8 3843 aa5.29□□□□□ -1.56
SEH1L-208ENST00000590843 HUWE1Q7Z6Z7 4374 aaKnown RBP5.29□□□□□ -1.56
SEH1L-208ENST00000590843 ZFHX3Q15911 3703 aa5.27□□□□□ -1.57
SEH1L-208ENST00000590843 DCHS1Q96JQ0 3298 aa5.27□□□□□ -1.57
SEH1L-208ENST00000590843 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
SEH1L-208ENST00000590843 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
SEH1L-208ENST00000590843 CELSR3Q9NYQ7 3312 aa5.25□□□□□ -1.57
SEH1L-208ENST00000590843 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
SEH1L-208ENST00000590843 DNAH14Q0VDD8 3507 aa5.2□□□□□ -1.58
SEH1L-208ENST00000590843 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
SEH1L-208ENST00000590843 SPEGQ15772 3267 aa5.15□□□□□ -1.59
SEH1L-208ENST00000590843 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
SEH1L-208ENST00000590843 DNAH1Q9P2D7 4330 aa5.14□□□□□ -1.59
SEH1L-208ENST00000590843 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
SEH1L-208ENST00000590843 MYO15AQ9UKN7 3530 aa5.11□□□□□ -1.59
SEH1L-208ENST00000590843 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
SEH1L-208ENST00000590843 KRTAP15-1Q3LI76 137 aa5.1□□□□□ -1.59
SEH1L-208ENST00000590843 DNAH11Q96DT5 4516 aa5.1□□□□□ -1.59
SEH1L-208ENST00000590843 COL7A1Q02388 2944 aa5.09□□□□□ -1.59
SEH1L-208ENST00000590843 MEGF8Q7Z7M0 2845 aa5.09□□□□□ -1.59
SEH1L-208ENST00000590843 MUC3AQ02505 3323 aa5.08□□□□□ -1.6
SEH1L-208ENST00000590843 LOC400499M0QZD8 3231 aa5.08□□□□□ -1.6
SEH1L-208ENST00000590843 MT1HP80294 61 aa5.07□□□□□ -1.6
SEH1L-208ENST00000590843 KRTAP3-1Q9BYR8 98 aa5.03□□□□□ -1.6
SEH1L-208ENST00000590843 KRTAP12-1P59990 96 aa5□□□□□ -1.61
SEH1L-208ENST00000590843 DNAH10Q8IVF4 4471 aa4.99□□□□□ -1.61
SEH1L-208ENST00000590843 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
SEH1L-208ENST00000590843 DNHD1Q96M86 4753 aa4.97□□□□□ -1.61
SEH1L-208ENST00000590843 DMDP11532 3685 aa4.96□□□□□ -1.62
SEH1L-208ENST00000590843 KRTAP17-1Q9BYP8 105 aa4.93□□□□□ -1.62
SEH1L-208ENST00000590843 RELNP78509 3460 aa4.9□□□□□ -1.62
SEH1L-208ENST00000590843 PLECQ15149 4684 aaKnown RBP4.9□□□□□ -1.63
SEH1L-208ENST00000590843 MT2AP02795 61 aa4.88□□□□□ -1.63
SEH1L-208ENST00000590843 DNAH9Q9NYC9 4486 aa4.88□□□□□ -1.63
SEH1L-208ENST00000590843 BIRC6Q9NR09 4857 aa4.87□□□□□ -1.63
SEH1L-208ENST00000590843 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
SEH1L-208ENST00000590843 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
SEH1L-208ENST00000590843 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
SEH1L-208ENST00000590843 LAMA5O15230 3695 aa4.84□□□□□ -1.63
SEH1L-208ENST00000590843 ZFHX4Q86UP3 3567 aa4.83□□□□□ -1.64
SEH1L-208ENST00000590843 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
SEH1L-208ENST00000590843 ASPMQ8IZT6 3477 aa4.81□□□□□ -1.64
SEH1L-208ENST00000590843 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
SEH1L-208ENST00000590843 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms