RNA–Protein interactions for RNA: ENST00000586869.5

NLE1-203, Transcript of notchless homolog 1, humanhuman

TSL 1 (best) BASIC

Gene NLE1, Length 5,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-203ENST00000586869 CELSR2Q9HCU4 2923 aa10.37□□□□□ -0.75
NLE1-203ENST00000586869 A6NN06 94 aa10.31□□□□□ -0.76
NLE1-203ENST00000586869 FBN2P35556 2912 aa10.31□□□□□ -0.76
NLE1-203ENST00000586869 SPATA8Q6RVD6 105 aa10.3□□□□□ -0.76
NLE1-203ENST00000586869 NF1P21359 2839 aa10.27□□□□□ -0.77
NLE1-203ENST00000586869 Q5VSD8 79 aa10.25□□□□□ -0.77
NLE1-203ENST00000586869 WDFY3Q8IZQ1 3526 aa10.24□□□□□ -0.77
NLE1-203ENST00000586869 A8MU10 97 aa10.24□□□□□ -0.77
NLE1-203ENST00000586869 DCHS2Q6V1P9 2916 aa10.24□□□□□ -0.77
NLE1-203ENST00000586869 H1FX-AS1Q4G0G2 97 aa10.21□□□□□ -0.77
NLE1-203ENST00000586869 Q6ZSA8 131 aa10.21□□□□□ -0.77
NLE1-203ENST00000586869 S4R3F8 94 aa10.21□□□□□ -0.77
NLE1-203ENST00000586869 KRTAP21-3Q3LHN1 58 aa10.19□□□□□ -0.78
NLE1-203ENST00000586869 MXRA5Q9NR99 2828 aa10.17□□□□□ -0.78
NLE1-203ENST00000586869 RPL37P61927 97 aaKnown RBP10.14□□□□□ -0.79
NLE1-203ENST00000586869 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
NLE1-203ENST00000586869 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
NLE1-203ENST00000586869 RELNP78509 3460 aa10.1□□□□□ -0.79
NLE1-203ENST00000586869 RPS29P62273 56 aaKnown RBP10.09□□□□□ -0.79
NLE1-203ENST00000586869 ROMO1P60602 79 aa10.09□□□□□ -0.79
NLE1-203ENST00000586869 H3BS24 57 aa10.09□□□□□ -0.79
NLE1-203ENST00000586869 DCHS1Q96JQ0 3298 aa10.09□□□□□ -0.79
NLE1-203ENST00000586869 ZFHX4Q86UP3 3567 aa10.08□□□□□ -0.8
NLE1-203ENST00000586869 MUC3AQ02505 3323 aa10.01□□□□□ -0.81
NLE1-203ENST00000586869 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
NLE1-203ENST00000586869 ASPMQ8IZT6 3477 aa9.97□□□□□ -0.81
NLE1-203ENST00000586869 LUZP6Q538Z0 58 aa9.95□□□□□ -0.82
NLE1-203ENST00000586869 CAMK2N1Q7Z7J9 78 aa9.95□□□□□ -0.82
NLE1-203ENST00000586869 LAMA5O15230 3695 aa9.95□□□□□ -0.82
NLE1-203ENST00000586869 M0R2T5 61 aa9.91□□□□□ -0.82
NLE1-203ENST00000586869 R4GN34 69 aa9.91□□□□□ -0.82
NLE1-203ENST00000586869 DMDP11532 3685 aa9.9□□□□□ -0.82
NLE1-203ENST00000586869 KRTAP25-1Q3LHN0 102 aa9.89□□□□□ -0.83
NLE1-203ENST00000586869 CSMD1Q96PZ7 3565 aa9.87□□□□□ -0.83
NLE1-203ENST00000586869 SMG1Q96Q15 3661 aaKnown RBP9.86□□□□□ -0.83
NLE1-203ENST00000586869 SEC61BP60468 96 aaKnown RBP9.83□□□□□ -0.84
NLE1-203ENST00000586869 TENM3Q9P273 2699 aa9.82□□□□□ -0.84
NLE1-203ENST00000586869 CELSR1Q9NYQ6 3014 aa9.81□□□□□ -0.84
NLE1-203ENST00000586869 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
NLE1-203ENST00000586869 A8MUU9 505 aa9.78□□□□□ -0.84
NLE1-203ENST00000586869 M0QZ58 72 aa9.78□□□□□ -0.84
NLE1-203ENST00000586869 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
NLE1-203ENST00000586869 KRTAP1-4P0C5Y4 121 aa9.74□□□□□ -0.85
NLE1-203ENST00000586869 PDZD2O15018 2839 aa9.71□□□□□ -0.86
NLE1-203ENST00000586869 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
NLE1-203ENST00000586869 TENM1Q9UKZ4 2725 aa9.67□□□□□ -0.86
NLE1-203ENST00000586869 TENM2Q9NT68 2774 aa9.65□□□□□ -0.87
NLE1-203ENST00000586869 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
NLE1-203ENST00000586869 NBPF19A0A087WUL8 3843 aa9.6□□□□□ -0.87
NLE1-203ENST00000586869 PKD1L1Q8TDX9 2849 aa9.58□□□□□ -0.88
NLE1-203ENST00000586869 OTOGQ6ZRI0 2925 aa9.58□□□□□ -0.88
NLE1-203ENST00000586869 SVEP1Q4LDE5 3571 aa9.56□□□□□ -0.88
NLE1-203ENST00000586869 H0YAA0 97 aa9.54□□□□□ -0.88
NLE1-203ENST00000586869 A0A0A0MQY5 61 aa9.54□□□□□ -0.88
NLE1-203ENST00000586869 VWFP04275 2813 aa9.53□□□□□ -0.88
NLE1-203ENST00000586869 ZFHX3Q15911 3703 aa9.48□□□□□ -0.89
NLE1-203ENST00000586869 FBN1P35555 2871 aaKnown RBP9.46□□□□□ -0.9
NLE1-203ENST00000586869 TGP01266 2768 aa9.46□□□□□ -0.9
NLE1-203ENST00000586869 NDUFAF8A1L188 74 aa9.36□□□□□ -0.91
NLE1-203ENST00000586869 SPENQ96T58 3664 aaKnown RBP9.35□□□□□ -0.91
NLE1-203ENST00000586869 XP32Q5T750 250 aa9.35□□□□□ -0.91
NLE1-203ENST00000586869 BSNQ9UPA5 3926 aa9.29□□□□□ -0.92
NLE1-203ENST00000586869 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
NLE1-203ENST00000586869 C10orf95Q9H7T3 257 aa9.25□□□□□ -0.93
NLE1-203ENST00000586869 ANK3Q12955 4377 aaKnown RBP9.24□□□□□ -0.93
NLE1-203ENST00000586869 CSMD2Q7Z408 3487 aa9.24□□□□□ -0.93
NLE1-203ENST00000586869 CUBNO60494 3623 aa9.22□□□□□ -0.93
NLE1-203ENST00000586869 P0C880 135 aa9.13□□□□□ -0.95
NLE1-203ENST00000586869 A0A1B0GVY2 172 aa9.12□□□□□ -0.95
NLE1-203ENST00000586869 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
NLE1-203ENST00000586869 TNP1P09430 55 aa9.07□□□□□ -0.96
NLE1-203ENST00000586869 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
NLE1-203ENST00000586869 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
NLE1-203ENST00000586869 KRTAP10-8P60410 259 aa9□□□□□ -0.97
NLE1-203ENST00000586869 TRRAPQ9Y4A5 3859 aa8.99□□□□□ -0.97
NLE1-203ENST00000586869 SRRM2Q9UQ35 2752 aaKnown RBP8.96□□□□□ -0.98
NLE1-203ENST00000586869 FBN3Q75N90 2809 aa8.96□□□□□ -0.98
NLE1-203ENST00000586869 KRTAP12-2P59991 146 aa8.86□□□□□ -0.99
NLE1-203ENST00000586869 VPS13CQ709C8 3753 aa8.84□□□□□ -0.99
NLE1-203ENST00000586869 MEGF8Q7Z7M0 2845 aa8.83□□□□□ -1
NLE1-203ENST00000586869 KRTAP12-1P59990 96 aa8.76□□□□□ -1.01
NLE1-203ENST00000586869 KRTAP10-6P60371 365 aaPredicted RBP8.74□□□□□ -1.01
NLE1-203ENST00000586869 KRTAP13-4Q3LI77 160 aa8.69□□□□□ -1.02
NLE1-203ENST00000586869 HUWE1Q7Z6Z7 4374 aaKnown RBP8.65□□□□□ -1.02
NLE1-203ENST00000586869 COL7A1Q02388 2944 aa8.62□□□□□ -1.03
NLE1-203ENST00000586869 KRTAP10-10P60014 251 aa8.57□□□□□ -1.04
NLE1-203ENST00000586869 ZNF469Q96JG9 3925 aaPredicted RBP8.51□□□□□ -1.05
NLE1-203ENST00000586869 AKAP9Q99996 3911 aa8.5□□□□□ -1.05
NLE1-203ENST00000586869 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
NLE1-203ENST00000586869 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
NLE1-203ENST00000586869 KRTAP10-4P60372 401 aaPredicted RBP8.41□□□□□ -1.06
NLE1-203ENST00000586869 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
NLE1-203ENST00000586869 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
NLE1-203ENST00000586869 KRTAP15-1Q3LI76 137 aa8.29□□□□□ -1.08
NLE1-203ENST00000586869 CSMD3Q7Z407 3707 aa8.27□□□□□ -1.09
NLE1-203ENST00000586869 DNAH9Q9NYC9 4486 aa8.25□□□□□ -1.09
NLE1-203ENST00000586869 PRO2289Q9P1D8 64 aa8.24□□□□□ -1.09
NLE1-203ENST00000586869 DNHD1Q96M86 4753 aa8.16□□□□□ -1.1
NLE1-203ENST00000586869 DNAH1Q9P2D7 4330 aa8.13□□□□□ -1.11
NLE1-203ENST00000586869 PLECQ15149 4684 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms