RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 FRYLO94915 3013 aa9.03□□□□□ -0.96
ERBB2-214ENST00000583038 REV3LO60673 3130 aa9.02□□□□□ -0.97
ERBB2-214ENST00000583038 LRBAP50851 2863 aa9.01□□□□□ -0.97
ERBB2-214ENST00000583038 UNC80Q8N2C7 3258 aa9.01□□□□□ -0.97
ERBB2-214ENST00000583038 CELSR2Q9HCU4 2923 aa9□□□□□ -0.97
ERBB2-214ENST00000583038 ADGRG4Q8IZF6 3080 aa8.98□□□□□ -0.97
ERBB2-214ENST00000583038 NBEAQ8NFP9 2946 aa8.97□□□□□ -0.97
ERBB2-214ENST00000583038 FREM2Q5SZK8 3169 aa8.95□□□□□ -0.98
ERBB2-214ENST00000583038 ZZEF1O43149 2961 aa8.94□□□□□ -0.98
ERBB2-214ENST00000583038 LAMA1P25391 3075 aa8.9□□□□□ -0.98
ERBB2-214ENST00000583038 DCHS2Q6V1P9 2916 aa8.89□□□□□ -0.99
ERBB2-214ENST00000583038 TENM3Q9P273 2699 aa8.88□□□□□ -0.99
ERBB2-214ENST00000583038 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
ERBB2-214ENST00000583038 TNP1P09430 55 aa8.85□□□□□ -0.99
ERBB2-214ENST00000583038 ZANQ9Y493 2812 aa8.85□□□□□ -0.99
ERBB2-214ENST00000583038 KRTAP16-1A8MUX0 517 aa8.81□□□□□ -1
ERBB2-214ENST00000583038 BOD1L1Q8NFC6 3051 aa8.81□□□□□ -1
ERBB2-214ENST00000583038 CELSR3Q9NYQ7 3312 aa8.78□□□□□ -1
ERBB2-214ENST00000583038 CRYBG3Q68DQ2 2970 aa8.77□□□□□ -1.01
ERBB2-214ENST00000583038 XP32Q5T750 250 aa8.75□□□□□ -1.01
ERBB2-214ENST00000583038 PP632Q6XCG6 107 aa8.72□□□□□ -1.01
ERBB2-214ENST00000583038 CDH23Q9H251 3354 aa8.72□□□□□ -1.01
ERBB2-214ENST00000583038 TENM1Q9UKZ4 2725 aa8.7□□□□□ -1.02
ERBB2-214ENST00000583038 EYSQ5T1H1 3165 aa8.68□□□□□ -1.02
ERBB2-214ENST00000583038 TPRXLQ17RH7 258 aa8.67□□□□□ -1.02
ERBB2-214ENST00000583038 NDUFAF8A1L188 74 aa8.66□□□□□ -1.02
ERBB2-214ENST00000583038 NF1P21359 2839 aa8.66□□□□□ -1.02
ERBB2-214ENST00000583038 VCANP13611 3396 aa8.61□□□□□ -1.03
ERBB2-214ENST00000583038 HRNRQ86YZ3 2850 aaPredicted RBP8.58□□□□□ -1.04
ERBB2-214ENST00000583038 SZT2Q5T011 3432 aa8.55□□□□□ -1.04
ERBB2-214ENST00000583038 FBN2P35556 2912 aa8.55□□□□□ -1.04
ERBB2-214ENST00000583038 H0YAA0 97 aa8.54□□□□□ -1.04
ERBB2-214ENST00000583038 COL6A3P12111 3177 aa8.53□□□□□ -1.04
ERBB2-214ENST00000583038 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
ERBB2-214ENST00000583038 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
ERBB2-214ENST00000583038 TNRC18O15417 2968 aaPredicted RBP8.49□□□□□ -1.05
ERBB2-214ENST00000583038 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
ERBB2-214ENST00000583038 CFAP47Q6ZTR5 3102 aa8.47□□□□□ -1.05
ERBB2-214ENST00000583038 TENM2Q9NT68 2774 aa8.46□□□□□ -1.06
ERBB2-214ENST00000583038 MXRA5Q9NR99 2828 aa8.45□□□□□ -1.06
ERBB2-214ENST00000583038 TGP01266 2768 aa8.42□□□□□ -1.06
ERBB2-214ENST00000583038 P0C880 135 aa8.42□□□□□ -1.06
ERBB2-214ENST00000583038 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
ERBB2-214ENST00000583038 CELSR1Q9NYQ6 3014 aa8.34□□□□□ -1.07
ERBB2-214ENST00000583038 DMXL1Q9Y485 3027 aa8.34□□□□□ -1.07
ERBB2-214ENST00000583038 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
ERBB2-214ENST00000583038 KRTAP10-10P60014 251 aa8.32□□□□□ -1.08
ERBB2-214ENST00000583038 PKD1L1Q8TDX9 2849 aa8.31□□□□□ -1.08
ERBB2-214ENST00000583038 DNAH14Q0VDD8 3507 aa8.28□□□□□ -1.08
ERBB2-214ENST00000583038 PDZD2O15018 2839 aa8.26□□□□□ -1.09
ERBB2-214ENST00000583038 USP34Q70CQ2 3546 aa8.21□□□□□ -1.1
ERBB2-214ENST00000583038 SPEGQ15772 3267 aa8.16□□□□□ -1.1
ERBB2-214ENST00000583038 VWFP04275 2813 aa8.13□□□□□ -1.11
ERBB2-214ENST00000583038 LOC400499M0QZD8 3231 aa8.1□□□□□ -1.11
ERBB2-214ENST00000583038 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
ERBB2-214ENST00000583038 KRTAP13-4Q3LI77 160 aa7.98□□□□□ -1.13
ERBB2-214ENST00000583038 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
ERBB2-214ENST00000583038 SRRM2Q9UQ35 2752 aaKnown RBP7.92□□□□□ -1.14
ERBB2-214ENST00000583038 MYO15AQ9UKN7 3530 aa7.92□□□□□ -1.14
ERBB2-214ENST00000583038 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
ERBB2-214ENST00000583038 DCHS1Q96JQ0 3298 aa7.9□□□□□ -1.14
ERBB2-214ENST00000583038 FBN1P35555 2871 aaKnown RBP7.88□□□□□ -1.15
ERBB2-214ENST00000583038 SPTBN5Q9NRC6 3674 aaKnown RBP7.86□□□□□ -1.15
ERBB2-214ENST00000583038 OTOGQ6ZRI0 2925 aa7.78□□□□□ -1.16
ERBB2-214ENST00000583038 FBN3Q75N90 2809 aa7.77□□□□□ -1.17
ERBB2-214ENST00000583038 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
ERBB2-214ENST00000583038 RELNP78509 3460 aa7.67□□□□□ -1.18
ERBB2-214ENST00000583038 MEGF8Q7Z7M0 2845 aa7.66□□□□□ -1.18
ERBB2-214ENST00000583038 WDFY3Q8IZQ1 3526 aa7.64□□□□□ -1.19
ERBB2-214ENST00000583038 COL7A1Q02388 2944 aa7.59□□□□□ -1.19
ERBB2-214ENST00000583038 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
ERBB2-214ENST00000583038 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
ERBB2-214ENST00000583038 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
ERBB2-214ENST00000583038 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
ERBB2-214ENST00000583038 KRTAP10-4P60372 401 aaPredicted RBP7.39□□□□□ -1.23
ERBB2-214ENST00000583038 ZFHX3Q15911 3703 aa7.36□□□□□ -1.23
ERBB2-214ENST00000583038 ZFHX4Q86UP3 3567 aa7.35□□□□□ -1.23
ERBB2-214ENST00000583038 NBPF19A0A087WUL8 3843 aa7.35□□□□□ -1.23
ERBB2-214ENST00000583038 ANK3Q12955 4377 aaKnown RBP7.29□□□□□ -1.24
ERBB2-214ENST00000583038 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
ERBB2-214ENST00000583038 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
ERBB2-214ENST00000583038 INE1O15225 51 aa7.23□□□□□ -1.25
ERBB2-214ENST00000583038 LAMA5O15230 3695 aa7.22□□□□□ -1.25
ERBB2-214ENST00000583038 ASPMQ8IZT6 3477 aa7.16□□□□□ -1.26
ERBB2-214ENST00000583038 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
ERBB2-214ENST00000583038 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
ERBB2-214ENST00000583038 TRRAPQ9Y4A5 3859 aa7.08□□□□□ -1.28
ERBB2-214ENST00000583038 CSMD1Q96PZ7 3565 aa7.08□□□□□ -1.28
ERBB2-214ENST00000583038 MUC3AQ02505 3323 aa6.97□□□□□ -1.29
ERBB2-214ENST00000583038 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.29
ERBB2-214ENST00000583038 SMG1Q96Q15 3661 aaKnown RBP6.93□□□□□ -1.3
ERBB2-214ENST00000583038 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
ERBB2-214ENST00000583038 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.3
ERBB2-214ENST00000583038 DMDP11532 3685 aa6.89□□□□□ -1.31
ERBB2-214ENST00000583038 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
ERBB2-214ENST00000583038 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
ERBB2-214ENST00000583038 CUBNO60494 3623 aa6.83□□□□□ -1.32
ERBB2-214ENST00000583038 SVEP1Q4LDE5 3571 aa6.79□□□□□ -1.32
ERBB2-214ENST00000583038 SPENQ96T58 3664 aaKnown RBP6.77□□□□□ -1.33
ERBB2-214ENST00000583038 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms