RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 KRTAP11-1Q8IUC1 163 aa6.41□□□□□ -1.38
USB1-212ENST00000566082 Q96NJ1 140 aa6.39□□□□□ -1.39
USB1-212ENST00000566082 TRRAPQ9Y4A5 3859 aa6.38□□□□□ -1.39
USB1-212ENST00000566082 PANO1I0J062 215 aa6.38□□□□□ -1.39
USB1-212ENST00000566082 SSBP3-AS1Q7Z2R9 100 aa6.38□□□□□ -1.39
USB1-212ENST00000566082 IGLV7-43P04211 117 aa6.37□□□□□ -1.39
USB1-212ENST00000566082 PKD1L1Q8TDX9 2849 aa6.37□□□□□ -1.39
USB1-212ENST00000566082 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
USB1-212ENST00000566082 FBN1P35555 2871 aaKnown RBP6.36□□□□□ -1.39
USB1-212ENST00000566082 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
USB1-212ENST00000566082 WWC2-AS2Q96NR7 200 aa6.33□□□□□ -1.4
USB1-212ENST00000566082 A0A087X002 238 aa6.32□□□□□ -1.4
USB1-212ENST00000566082 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
USB1-212ENST00000566082 PLA2G1BP04054 148 aaKnown RBP6.32□□□□□ -1.4
USB1-212ENST00000566082 Q8N1X5 172 aa6.32□□□□□ -1.4
USB1-212ENST00000566082 Q6ZR54 194 aa6.3□□□□□ -1.4
USB1-212ENST00000566082 Q5W150 140 aa6.28□□□□□ -1.4
USB1-212ENST00000566082 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
USB1-212ENST00000566082 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
USB1-212ENST00000566082 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
USB1-212ENST00000566082 A6NN06 94 aa6.23□□□□□ -1.41
USB1-212ENST00000566082 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
USB1-212ENST00000566082 LINC01554Q52M75 96 aa6.22□□□□□ -1.41
USB1-212ENST00000566082 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
USB1-212ENST00000566082 LINC00304Q8N9R0 145 aa6.18□□□□□ -1.42
USB1-212ENST00000566082 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
USB1-212ENST00000566082 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
USB1-212ENST00000566082 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
USB1-212ENST00000566082 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
USB1-212ENST00000566082 SMR3BP02814 79 aaPredicted RBP6.16□□□□□ -1.42
USB1-212ENST00000566082 ANK3Q12955 4377 aaKnown RBP6.16□□□□□ -1.42
USB1-212ENST00000566082 ADM2Q7Z4H4 148 aa6.15□□□□□ -1.42
USB1-212ENST00000566082 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
USB1-212ENST00000566082 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
USB1-212ENST00000566082 CSMD3Q7Z407 3707 aa6.12□□□□□ -1.43
USB1-212ENST00000566082 A0A1B0GU33 70 aa6.1□□□□□ -1.43
USB1-212ENST00000566082 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
USB1-212ENST00000566082 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
USB1-212ENST00000566082 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
USB1-212ENST00000566082 A0A0D9SG42 100 aa6.07□□□□□ -1.44
USB1-212ENST00000566082 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
USB1-212ENST00000566082 TGP01266 2768 aa6.06□□□□□ -1.44
USB1-212ENST00000566082 H3BS24 57 aa6.06□□□□□ -1.44
USB1-212ENST00000566082 ANK2Q01484 3957 aa6.06□□□□□ -1.44
USB1-212ENST00000566082 ASB16-AS1Q495Z4 193 aa6.04□□□□□ -1.44
USB1-212ENST00000566082 KRTAP10-1P60331 282 aa6.02□□□□□ -1.45
USB1-212ENST00000566082 KRTAP13-2Q52LG2 175 aa5.99□□□□□ -1.45
USB1-212ENST00000566082 COL7A1Q02388 2944 aa5.93□□□□□ -1.46
USB1-212ENST00000566082 H1FX-AS1Q4G0G2 97 aa5.91□□□□□ -1.46
USB1-212ENST00000566082 FBN3Q75N90 2809 aa5.89□□□□□ -1.47
USB1-212ENST00000566082 DNHD1Q96M86 4753 aa5.87□□□□□ -1.47
USB1-212ENST00000566082 J3QL48 77 aa5.86□□□□□ -1.47
USB1-212ENST00000566082 LYSTQ99698 3801 aa5.85□□□□□ -1.47
USB1-212ENST00000566082 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
USB1-212ENST00000566082 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
USB1-212ENST00000566082 RPL37P61927 97 aaKnown RBP5.82□□□□□ -1.48
USB1-212ENST00000566082 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
USB1-212ENST00000566082 ROMO1P60602 79 aa5.8□□□□□ -1.48
USB1-212ENST00000566082 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
USB1-212ENST00000566082 Q6ZSA8 131 aa5.8□□□□□ -1.48
USB1-212ENST00000566082 KRTAP16-1A8MUX0 517 aa5.78□□□□□ -1.48
USB1-212ENST00000566082 KRTAP21-3Q3LHN1 58 aa5.78□□□□□ -1.48
USB1-212ENST00000566082 KRTAP1-4P0C5Y4 121 aa5.77□□□□□ -1.49
USB1-212ENST00000566082 S4R3F8 94 aa5.76□□□□□ -1.49
USB1-212ENST00000566082 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
USB1-212ENST00000566082 CMYA5Q8N3K9 4069 aa5.76□□□□□ -1.49
USB1-212ENST00000566082 H0YAA0 97 aa5.75□□□□□ -1.49
USB1-212ENST00000566082 A8MUU9 505 aa5.71□□□□□ -1.5
USB1-212ENST00000566082 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
USB1-212ENST00000566082 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
USB1-212ENST00000566082 DNAH7Q8WXX0 4024 aa5.64□□□□□ -1.51
USB1-212ENST00000566082 PRKDCP78527 4128 aaKnown RBP5.64□□□□□ -1.51
USB1-212ENST00000566082 R4GN34 69 aa5.58□□□□□ -1.52
USB1-212ENST00000566082 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
USB1-212ENST00000566082 Q5VSD8 79 aa5.58□□□□□ -1.52
USB1-212ENST00000566082 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
USB1-212ENST00000566082 M0QZ58 72 aa5.55□□□□□ -1.52
USB1-212ENST00000566082 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
USB1-212ENST00000566082 HUWE1Q7Z6Z7 4374 aaKnown RBP5.53□□□□□ -1.52
USB1-212ENST00000566082 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
USB1-212ENST00000566082 DNAH10Q8IVF4 4471 aa5.51□□□□□ -1.53
USB1-212ENST00000566082 DNAH3Q8TD57 4116 aa5.5□□□□□ -1.53
USB1-212ENST00000566082 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
USB1-212ENST00000566082 KMT2AQ03164 3969 aa5.48□□□□□ -1.53
USB1-212ENST00000566082 P0C880 135 aa5.46□□□□□ -1.54
USB1-212ENST00000566082 STARD9Q9P2P6 4700 aa5.45□□□□□ -1.54
USB1-212ENST00000566082 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
USB1-212ENST00000566082 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
USB1-212ENST00000566082 PLECQ15149 4684 aaKnown RBP5.42□□□□□ -1.54
USB1-212ENST00000566082 XP32Q5T750 250 aa5.41□□□□□ -1.54
USB1-212ENST00000566082 HYDINQ4G0P3 5121 aa5.37□□□□□ -1.55
USB1-212ENST00000566082 TPRXLQ17RH7 258 aa5.34□□□□□ -1.55
USB1-212ENST00000566082 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.55
USB1-212ENST00000566082 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
USB1-212ENST00000566082 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
USB1-212ENST00000566082 DNAH1Q9P2D7 4330 aa5.31□□□□□ -1.56
USB1-212ENST00000566082 KMT2CQ8NEZ4 4911 aaKnown RBP5.3□□□□□ -1.56
USB1-212ENST00000566082 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
USB1-212ENST00000566082 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
USB1-212ENST00000566082 VPS13DQ5THJ4 4388 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms