RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 TENM3Q9P273 2699 aa11.04□□□□□ -0.64
IFT140-206ENST00000565298 NF1P21359 2839 aa11.02□□□□□ -0.64
IFT140-206ENST00000565298 KRTAP7-1Q8IUC3 87 aa11.02□□□□□ -0.64
IFT140-206ENST00000565298 KRTAP29-1A8MX34 341 aaPredicted RBP10.99□□□□□ -0.65
IFT140-206ENST00000565298 Q75L30 129 aa10.99□□□□□ -0.65
IFT140-206ENST00000565298 LOC400499M0QZD8 3231 aa10.98□□□□□ -0.65
IFT140-206ENST00000565298 KRTAP13-1Q8IUC0 172 aa10.98□□□□□ -0.65
IFT140-206ENST00000565298 Q5XG85 94 aa10.96□□□□□ -0.66
IFT140-206ENST00000565298 KTN1-AS1Q86SY8 53 aa10.94□□□□□ -0.66
IFT140-206ENST00000565298 KRTAP13-2Q52LG2 175 aa10.93□□□□□ -0.66
IFT140-206ENST00000565298 USP34Q70CQ2 3546 aa10.91□□□□□ -0.66
IFT140-206ENST00000565298 TENM1Q9UKZ4 2725 aa10.89□□□□□ -0.67
IFT140-206ENST00000565298 LCA10Q71F78 164 aa10.88□□□□□ -0.67
IFT140-206ENST00000565298 HRNRQ86YZ3 2850 aaPredicted RBP10.88□□□□□ -0.67
IFT140-206ENST00000565298 NOTCH2NLQ7Z3S9 236 aa10.86□□□□□ -0.67
IFT140-206ENST00000565298 MXRA5Q9NR99 2828 aa10.85□□□□□ -0.67
IFT140-206ENST00000565298 M0QZ58 72 aa10.83□□□□□ -0.68
IFT140-206ENST00000565298 FBN2P35556 2912 aa10.83□□□□□ -0.68
IFT140-206ENST00000565298 CYSTM1Q9H1C7 97 aa10.83□□□□□ -0.68
IFT140-206ENST00000565298 H1FX-AS1Q4G0G2 97 aa10.78□□□□□ -0.68
IFT140-206ENST00000565298 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.69
IFT140-206ENST00000565298 LUZP6Q538Z0 58 aa10.76□□□□□ -0.69
IFT140-206ENST00000565298 TENM2Q9NT68 2774 aa10.71□□□□□ -0.69
IFT140-206ENST00000565298 Q5VV11 94 aa10.71□□□□□ -0.69
IFT140-206ENST00000565298 ADM2Q7Z4H4 148 aa10.7□□□□□ -0.7
IFT140-206ENST00000565298 PLAC4Q8WY50 150 aa10.69□□□□□ -0.7
IFT140-206ENST00000565298 WDFY3Q8IZQ1 3526 aa10.68□□□□□ -0.7
IFT140-206ENST00000565298 PKD1L1Q8TDX9 2849 aa10.62□□□□□ -0.71
IFT140-206ENST00000565298 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
IFT140-206ENST00000565298 A8MUU9 505 aa10.55□□□□□ -0.72
IFT140-206ENST00000565298 KRTAP1-4P0C5Y4 121 aa10.54□□□□□ -0.72
IFT140-206ENST00000565298 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
IFT140-206ENST00000565298 MUC3AQ02505 3323 aa10.5□□□□□ -0.73
IFT140-206ENST00000565298 ROMO1P60602 79 aa10.5□□□□□ -0.73
IFT140-206ENST00000565298 DCHS1Q96JQ0 3298 aa10.48□□□□□ -0.73
IFT140-206ENST00000565298 SPATA8Q6RVD6 105 aa10.48□□□□□ -0.73
IFT140-206ENST00000565298 ASPMQ8IZT6 3477 aa10.47□□□□□ -0.73
IFT140-206ENST00000565298 RELNP78509 3460 aa10.41□□□□□ -0.74
IFT140-206ENST00000565298 LAMA5O15230 3695 aa10.37□□□□□ -0.75
IFT140-206ENST00000565298 PRAC1Q96KF2 57 aa10.37□□□□□ -0.75
IFT140-206ENST00000565298 PDZD2O15018 2839 aa10.36□□□□□ -0.75
IFT140-206ENST00000565298 XP32Q5T750 250 aa10.36□□□□□ -0.75
IFT140-206ENST00000565298 TGP01266 2768 aa10.34□□□□□ -0.75
IFT140-206ENST00000565298 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
IFT140-206ENST00000565298 ZFHX4Q86UP3 3567 aa10.34□□□□□ -0.75
IFT140-206ENST00000565298 DMDP11532 3685 aa10.33□□□□□ -0.76
IFT140-206ENST00000565298 VWFP04275 2813 aa10.31□□□□□ -0.76
IFT140-206ENST00000565298 OTOGQ6ZRI0 2925 aa10.22□□□□□ -0.77
IFT140-206ENST00000565298 A0A1B0GVY2 172 aa10.21□□□□□ -0.77
IFT140-206ENST00000565298 FBN1P35555 2871 aaKnown RBP10.18□□□□□ -0.78
IFT140-206ENST00000565298 A8MU10 97 aa10.16□□□□□ -0.78
IFT140-206ENST00000565298 KRTAP13-3Q3SY46 172 aa10.11□□□□□ -0.79
IFT140-206ENST00000565298 KRTAP10-8P60410 259 aa10.09□□□□□ -0.79
IFT140-206ENST00000565298 SRRM2Q9UQ35 2752 aaKnown RBP10.06□□□□□ -0.8
IFT140-206ENST00000565298 SMG1Q96Q15 3661 aaKnown RBP10.04□□□□□ -0.8
IFT140-206ENST00000565298 TNP1P09430 55 aa10.03□□□□□ -0.8
IFT140-206ENST00000565298 KRTAP16-1A8MUX0 517 aa10.01□□□□□ -0.81
IFT140-206ENST00000565298 CSMD1Q96PZ7 3565 aa10.01□□□□□ -0.81
IFT140-206ENST00000565298 A0A0A0MQY5 61 aa9.98□□□□□ -0.81
IFT140-206ENST00000565298 KRTAP10-10P60014 251 aa9.88□□□□□ -0.83
IFT140-206ENST00000565298 H3BS24 57 aa9.85□□□□□ -0.83
IFT140-206ENST00000565298 SVEP1Q4LDE5 3571 aa9.84□□□□□ -0.83
IFT140-206ENST00000565298 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
IFT140-206ENST00000565298 ZFHX3Q15911 3703 aa9.83□□□□□ -0.84
IFT140-206ENST00000565298 A6NN06 94 aa9.83□□□□□ -0.84
IFT140-206ENST00000565298 CUBNO60494 3623 aa9.76□□□□□ -0.85
IFT140-206ENST00000565298 NBPF19A0A087WUL8 3843 aa9.74□□□□□ -0.85
IFT140-206ENST00000565298 PRO2289Q9P1D8 64 aa9.7□□□□□ -0.86
IFT140-206ENST00000565298 PP632Q6XCG6 107 aa9.7□□□□□ -0.86
IFT140-206ENST00000565298 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
IFT140-206ENST00000565298 P0C880 135 aa9.58□□□□□ -0.88
IFT140-206ENST00000565298 H0YAA0 97 aa9.56□□□□□ -0.88
IFT140-206ENST00000565298 SPENQ96T58 3664 aaKnown RBP9.54□□□□□ -0.88
IFT140-206ENST00000565298 COL7A1Q02388 2944 aa9.49□□□□□ -0.89
IFT140-206ENST00000565298 MEGF8Q7Z7M0 2845 aa9.48□□□□□ -0.89
IFT140-206ENST00000565298 CSMD2Q7Z408 3487 aa9.44□□□□□ -0.9
IFT140-206ENST00000565298 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
IFT140-206ENST00000565298 ANK3Q12955 4377 aaKnown RBP9.39□□□□□ -0.91
IFT140-206ENST00000565298 MT1HL1P0DM35 61 aa9.31□□□□□ -0.92
IFT140-206ENST00000565298 BSNQ9UPA5 3926 aa9.29□□□□□ -0.92
IFT140-206ENST00000565298 NDUFAF8A1L188 74 aa9.25□□□□□ -0.93
IFT140-206ENST00000565298 TRRAPQ9Y4A5 3859 aa9.19□□□□□ -0.94
IFT140-206ENST00000565298 KRTAP3-1Q9BYR8 98 aa9.16□□□□□ -0.94
IFT140-206ENST00000565298 KRTAP10-4P60372 401 aaPredicted RBP9.09□□□□□ -0.95
IFT140-206ENST00000565298 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
IFT140-206ENST00000565298 KRTAP4-5Q9BYR2 181 aa9.03□□□□□ -0.96
IFT140-206ENST00000565298 KRTAP13-4Q3LI77 160 aa9□□□□□ -0.97
IFT140-206ENST00000565298 KRTAP12-1P59990 96 aa9□□□□□ -0.97
IFT140-206ENST00000565298 VPS13CQ709C8 3753 aa8.92□□□□□ -0.98
IFT140-206ENST00000565298 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
IFT140-206ENST00000565298 HUWE1Q7Z6Z7 4374 aaKnown RBP8.75□□□□□ -1.01
IFT140-206ENST00000565298 ZNF469Q96JG9 3925 aaPredicted RBP8.66□□□□□ -1.02
IFT140-206ENST00000565298 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
IFT140-206ENST00000565298 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
IFT140-206ENST00000565298 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
IFT140-206ENST00000565298 DNHD1Q96M86 4753 aa8.54□□□□□ -1.04
IFT140-206ENST00000565298 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
IFT140-206ENST00000565298 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
IFT140-206ENST00000565298 DNAH9Q9NYC9 4486 aa8.47□□□□□ -1.05
IFT140-206ENST00000565298 KRTAP10-12P60413 245 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms