RNA–Protein interactions for RNA: ENST00000564061.5

POLR3E-208, Transcript of RNA polymerase III subunit E, humanhuman

TSL 1 (best)

Gene POLR3E, Length 4,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-208ENST00000564061 KTN1-AS1Q86SY8 53 aa7.56□□□□□ -1.2
POLR3E-208ENST00000564061 CDC42SE1Q9NRR8 79 aa7.56□□□□□ -1.2
POLR3E-208ENST00000564061 DMBT1Q9UGM3 2413 aaPredicted RBP7.55□□□□□ -1.2
POLR3E-208ENST00000564061 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
POLR3E-208ENST00000564061 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
POLR3E-208ENST00000564061 PKD1L1Q8TDX9 2849 aa7.53□□□□□ -1.2
POLR3E-208ENST00000564061 ZCCHC13Q8WW36 166 aaKnown RBP7.53□□□□□ -1.2
POLR3E-208ENST00000564061 A0A087X002 238 aa7.52□□□□□ -1.21
POLR3E-208ENST00000564061 NOTCH2NLQ7Z3S9 236 aa7.52□□□□□ -1.21
POLR3E-208ENST00000564061 SPINK7P58062 85 aa7.5□□□□□ -1.21
POLR3E-208ENST00000564061 Q75L30 129 aa7.5□□□□□ -1.21
POLR3E-208ENST00000564061 J3QL48 77 aa7.47□□□□□ -1.21
POLR3E-208ENST00000564061 LINC01558Q9Y6Z2 57 aa7.47□□□□□ -1.21
POLR3E-208ENST00000564061 KRTAP10-2P60368 255 aa7.47□□□□□ -1.21
POLR3E-208ENST00000564061 Q5W150 140 aa7.47□□□□□ -1.21
POLR3E-208ENST00000564061 A8MU10 97 aa7.43□□□□□ -1.22
POLR3E-208ENST00000564061 PRAC1Q96KF2 57 aa7.43□□□□□ -1.22
POLR3E-208ENST00000564061 TENM2Q9NT68 2774 aa7.41□□□□□ -1.22
POLR3E-208ENST00000564061 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
POLR3E-208ENST00000564061 KRTAP10-1P60331 282 aa7.4□□□□□ -1.23
POLR3E-208ENST00000564061 LCA10Q71F78 164 aa7.4□□□□□ -1.23
POLR3E-208ENST00000564061 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
POLR3E-208ENST00000564061 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
POLR3E-208ENST00000564061 LCE6AA0A183 80 aa7.38□□□□□ -1.23
POLR3E-208ENST00000564061 ANK3Q12955 4377 aaKnown RBP7.38□□□□□ -1.23
POLR3E-208ENST00000564061 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
POLR3E-208ENST00000564061 A0A0D9SG42 100 aa7.38□□□□□ -1.23
POLR3E-208ENST00000564061 Q6ZR54 194 aa7.36□□□□□ -1.23
POLR3E-208ENST00000564061 TGP01266 2768 aa7.35□□□□□ -1.23
POLR3E-208ENST00000564061 TRRAPQ9Y4A5 3859 aa7.34□□□□□ -1.23
POLR3E-208ENST00000564061 ZNF469Q96JG9 3925 aaPredicted RBP7.33□□□□□ -1.24
POLR3E-208ENST00000564061 KRTAP13-1Q8IUC0 172 aa7.31□□□□□ -1.24
POLR3E-208ENST00000564061 KRTAP21-3Q3LHN1 58 aa7.3□□□□□ -1.24
POLR3E-208ENST00000564061 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
POLR3E-208ENST00000564061 A0A1B0GU33 70 aa7.27□□□□□ -1.25
POLR3E-208ENST00000564061 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
POLR3E-208ENST00000564061 AKAP9Q99996 3911 aa7.26□□□□□ -1.25
POLR3E-208ENST00000564061 CRIPTQ9P021 101 aa7.24□□□□□ -1.25
POLR3E-208ENST00000564061 SRRM2Q9UQ35 2752 aaKnown RBP7.22□□□□□ -1.25
POLR3E-208ENST00000564061 LINC01554Q52M75 96 aa7.22□□□□□ -1.25
POLR3E-208ENST00000564061 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
POLR3E-208ENST00000564061 KRTAP13-2Q52LG2 175 aa7.2□□□□□ -1.26
POLR3E-208ENST00000564061 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
POLR3E-208ENST00000564061 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
POLR3E-208ENST00000564061 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
POLR3E-208ENST00000564061 A6NN06 94 aa7.1□□□□□ -1.27
POLR3E-208ENST00000564061 FBN3Q75N90 2809 aa7.07□□□□□ -1.28
POLR3E-208ENST00000564061 ASB16-AS1Q495Z4 193 aa7.06□□□□□ -1.28
POLR3E-208ENST00000564061 Q6ZSA8 131 aa7.04□□□□□ -1.28
POLR3E-208ENST00000564061 H1FX-AS1Q4G0G2 97 aa7□□□□□ -1.29
POLR3E-208ENST00000564061 S4R3F8 94 aa7□□□□□ -1.29
POLR3E-208ENST00000564061 Q5VSD8 79 aa6.99□□□□□ -1.29
POLR3E-208ENST00000564061 CSMD3Q7Z407 3707 aa6.98□□□□□ -1.29
POLR3E-208ENST00000564061 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
POLR3E-208ENST00000564061 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
POLR3E-208ENST00000564061 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
POLR3E-208ENST00000564061 H3BS24 57 aa6.9□□□□□ -1.3
POLR3E-208ENST00000564061 MEGF8Q7Z7M0 2845 aa6.88□□□□□ -1.31
POLR3E-208ENST00000564061 ROMO1P60602 79 aa6.85□□□□□ -1.31
POLR3E-208ENST00000564061 R4GN34 69 aa6.82□□□□□ -1.32
POLR3E-208ENST00000564061 CAMK2N1Q7Z7J9 78 aa6.82□□□□□ -1.32
POLR3E-208ENST00000564061 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
POLR3E-208ENST00000564061 RPS29P62273 56 aaKnown RBP6.8□□□□□ -1.32
POLR3E-208ENST00000564061 M0R2T5 61 aa6.8□□□□□ -1.32
POLR3E-208ENST00000564061 M0QZ58 72 aa6.77□□□□□ -1.33
POLR3E-208ENST00000564061 A8MUU9 505 aa6.77□□□□□ -1.33
POLR3E-208ENST00000564061 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
POLR3E-208ENST00000564061 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
POLR3E-208ENST00000564061 KRTAP25-1Q3LHN0 102 aa6.75□□□□□ -1.33
POLR3E-208ENST00000564061 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
POLR3E-208ENST00000564061 H0YAA0 97 aa6.71□□□□□ -1.34
POLR3E-208ENST00000564061 SEC61BP60468 96 aaKnown RBP6.65□□□□□ -1.35
POLR3E-208ENST00000564061 DNHD1Q96M86 4753 aa6.63□□□□□ -1.35
POLR3E-208ENST00000564061 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
POLR3E-208ENST00000564061 ANK2Q01484 3957 aa6.61□□□□□ -1.35
POLR3E-208ENST00000564061 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
POLR3E-208ENST00000564061 XP32Q5T750 250 aa6.58□□□□□ -1.36
POLR3E-208ENST00000564061 DNAH9Q9NYC9 4486 aa6.56□□□□□ -1.36
POLR3E-208ENST00000564061 CMYA5Q8N3K9 4069 aa6.53□□□□□ -1.36
POLR3E-208ENST00000564061 DNAH10Q8IVF4 4471 aa6.52□□□□□ -1.36
POLR3E-208ENST00000564061 DNAH3Q8TD57 4116 aa6.52□□□□□ -1.37
POLR3E-208ENST00000564061 P0C880 135 aa6.51□□□□□ -1.37
POLR3E-208ENST00000564061 NDUFAF8A1L188 74 aa6.49□□□□□ -1.37
POLR3E-208ENST00000564061 PLECQ15149 4684 aaKnown RBP6.47□□□□□ -1.37
POLR3E-208ENST00000564061 KRTAP3-1Q9BYR8 98 aa6.45□□□□□ -1.38
POLR3E-208ENST00000564061 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.39
POLR3E-208ENST00000564061 PRKDCP78527 4128 aaKnown RBP6.39□□□□□ -1.39
POLR3E-208ENST00000564061 A0A1B0GVY2 172 aa6.38□□□□□ -1.39
POLR3E-208ENST00000564061 VPS13DQ5THJ4 4388 aa6.35□□□□□ -1.39
POLR3E-208ENST00000564061 KRTAP10-8P60410 259 aa6.34□□□□□ -1.39
POLR3E-208ENST00000564061 LYSTQ99698 3801 aa6.33□□□□□ -1.4
POLR3E-208ENST00000564061 STARD9Q9P2P6 4700 aa6.33□□□□□ -1.4
POLR3E-208ENST00000564061 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
POLR3E-208ENST00000564061 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
POLR3E-208ENST00000564061 A0A0A0MQY5 61 aa6.27□□□□□ -1.41
POLR3E-208ENST00000564061 DNAH17Q9UFH2 4485 aa6.26□□□□□ -1.41
POLR3E-208ENST00000564061 DYNC2H1Q8NCM8 4307 aaKnown RBP6.26□□□□□ -1.41
POLR3E-208ENST00000564061 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
POLR3E-208ENST00000564061 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
POLR3E-208ENST00000564061 DNAH11Q96DT5 4516 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms