RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 KMT2AQ03164 3969 aa12.88□□□□□ -0.35
LINC00565-201ENST00000562710 CHKB-CPT1BH3BT56 60 aa12.87□□□□□ -0.35
LINC00565-201ENST00000562710 DNAH17Q9UFH2 4485 aa12.87□□□□□ -0.35
LINC00565-201ENST00000562710 DNAH2Q9P225 4427 aa12.84□□□□□ -0.35
LINC00565-201ENST00000562710 SEC61GP60059 68 aa12.84□□□□□ -0.35
LINC00565-201ENST00000562710 A8MU10 97 aa12.83□□□□□ -0.36
LINC00565-201ENST00000562710 LOC101927531A0A1B0GV80 90 aa12.82□□□□□ -0.36
LINC00565-201ENST00000562710 IGLV7-43P04211 117 aa12.82□□□□□ -0.36
LINC00565-201ENST00000562710 SPINK6Q6UWN8 80 aa12.82□□□□□ -0.36
LINC00565-201ENST00000562710 FBN3Q75N90 2809 aa12.82□□□□□ -0.36
LINC00565-201ENST00000562710 Q75L30 129 aa12.79□□□□□ -0.36
LINC00565-201ENST00000562710 CIRBP-AS1Q8TBR5 109 aa12.78□□□□□ -0.36
LINC00565-201ENST00000562710 HRES1P13985 223 aa12.77□□□□□ -0.37
LINC00565-201ENST00000562710 C1orf134Q5TEV5 83 aa12.76□□□□□ -0.37
LINC00565-201ENST00000562710 TGP01266 2768 aa12.75□□□□□ -0.37
LINC00565-201ENST00000562710 MEGF8Q7Z7M0 2845 aa12.75□□□□□ -0.37
LINC00565-201ENST00000562710 Q5W150 140 aa12.75□□□□□ -0.37
LINC00565-201ENST00000562710 SPAG11AQ6PDA7 123 aa12.74□□□□□ -0.37
LINC00565-201ENST00000562710 KRTAP13-3Q3SY46 172 aa12.73□□□□□ -0.37
LINC00565-201ENST00000562710 LINC01558Q9Y6Z2 57 aa12.73□□□□□ -0.37
LINC00565-201ENST00000562710 PMAIP1Q13794 54 aa12.72□□□□□ -0.37
LINC00565-201ENST00000562710 SSBP3-AS1Q7Z2R9 100 aa12.71□□□□□ -0.38
LINC00565-201ENST00000562710 A6NED7 52 aa12.7□□□□□ -0.38
LINC00565-201ENST00000562710 LCA10Q71F78 164 aa12.68□□□□□ -0.38
LINC00565-201ENST00000562710 ALMS1Q8TCU4 4167 aa12.66□□□□□ -0.38
LINC00565-201ENST00000562710 C8orf87E5RJ46 101 aa12.66□□□□□ -0.38
LINC00565-201ENST00000562710 DNAH6Q9C0G6 4158 aa12.61□□□□□ -0.39
LINC00565-201ENST00000562710 LY6G6CO95867 125 aa12.6□□□□□ -0.39
LINC00565-201ENST00000562710 ATP11AUNQ6ZP68 121 aa12.59□□□□□ -0.39
LINC00565-201ENST00000562710 SPTSSBQ8NFR3 76 aa12.58□□□□□ -0.4
LINC00565-201ENST00000562710 CDC42SE1Q9NRR8 79 aa12.58□□□□□ -0.4
LINC00565-201ENST00000562710 DNAH11Q96DT5 4516 aa12.58□□□□□ -0.4
LINC00565-201ENST00000562710 LINC00313P59037 77 aa12.57□□□□□ -0.4
LINC00565-201ENST00000562710 KRTAP10-2P60368 255 aa12.56□□□□□ -0.4
LINC00565-201ENST00000562710 PRR26Q8N8Z3 221 aa12.56□□□□□ -0.4
LINC00565-201ENST00000562710 DNAH5Q8TE73 4624 aa12.54□□□□□ -0.4
LINC00565-201ENST00000562710 ACYP2P14621 99 aa12.54□□□□□ -0.4
LINC00565-201ENST00000562710 KRTAP13-2Q52LG2 175 aa12.53□□□□□ -0.4
LINC00565-201ENST00000562710 FAM229AH3BQW9 127 aa12.51□□□□□ -0.41
LINC00565-201ENST00000562710 SPINK7P58062 85 aa12.5□□□□□ -0.41
LINC00565-201ENST00000562710 DMAC1Q96GE9 116 aa12.48□□□□□ -0.41
LINC00565-201ENST00000562710 RETNLBQ9BQ08 111 aa12.46□□□□□ -0.41
LINC00565-201ENST00000562710 Q6ZSA8 131 aa12.44□□□□□ -0.42
LINC00565-201ENST00000562710 IGKV2-30P06310 120 aa12.43□□□□□ -0.42
LINC00565-201ENST00000562710 A6NN06 94 aa12.42□□□□□ -0.42
LINC00565-201ENST00000562710 KRTAP16-1A8MUX0 517 aa12.41□□□□□ -0.42
LINC00565-201ENST00000562710 KRTAP10-1P60331 282 aa12.41□□□□□ -0.42
LINC00565-201ENST00000562710 KTN1-AS1Q86SY8 53 aa12.4□□□□□ -0.42
LINC00565-201ENST00000562710 LRP1BQ9NZR2 4599 aa12.37□□□□□ -0.43
LINC00565-201ENST00000562710 KRTAP1-4P0C5Y4 121 aa12.37□□□□□ -0.43
LINC00565-201ENST00000562710 PKD1P98161 4303 aa12.35□□□□□ -0.43
LINC00565-201ENST00000562710 DNHD1Q96M86 4753 aa12.3□□□□□ -0.44
LINC00565-201ENST00000562710 VPS13BQ7Z7G8 4022 aa12.26□□□□□ -0.45
LINC00565-201ENST00000562710 IGKV2D-30A0A075B6S6 120 aa12.26□□□□□ -0.45
LINC00565-201ENST00000562710 FAT2Q9NYQ8 4349 aa12.24□□□□□ -0.45
LINC00565-201ENST00000562710 A0A1B0GU69 56 aa12.23□□□□□ -0.45
LINC00565-201ENST00000562710 C4orf48Q5BLP8 95 aa12.23□□□□□ -0.45
LINC00565-201ENST00000562710 PLA2G1BP04054 148 aaKnown RBP12.23□□□□□ -0.45
LINC00565-201ENST00000562710 HYDINQ4G0P3 5121 aa12.21□□□□□ -0.45
LINC00565-201ENST00000562710 TYMSOSQ8TAI1 123 aa12.21□□□□□ -0.46
LINC00565-201ENST00000562710 SPINK1P00995 79 aa12.19□□□□□ -0.46
LINC00565-201ENST00000562710 C7orf65Q6ZTY9 151 aa12.19□□□□□ -0.46
LINC00565-201ENST00000562710 RBM12B-AS1Q9P1G2 102 aa12.12□□□□□ -0.47
LINC00565-201ENST00000562710 SPATA8Q6RVD6 105 aa12.09□□□□□ -0.47
LINC00565-201ENST00000562710 UQCR11O14957 56 aa12.04□□□□□ -0.48
LINC00565-201ENST00000562710 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
LINC00565-201ENST00000562710 RPS29P62273 56 aaKnown RBP12.02□□□□□ -0.49
LINC00565-201ENST00000562710 MIR22HGQ0VDD5 57 aa12.02□□□□□ -0.49
LINC00565-201ENST00000562710 Q8N1X5 172 aa11.97□□□□□ -0.49
LINC00565-201ENST00000562710 PKHD1P08F94 4074 aa11.94□□□□□ -0.5
LINC00565-201ENST00000562710 SACSQ9NZJ4 4579 aa11.89□□□□□ -0.51
LINC00565-201ENST00000562710 SMR3BP02814 79 aaPredicted RBP11.84□□□□□ -0.51
LINC00565-201ENST00000562710 PRAC1Q96KF2 57 aa11.83□□□□□ -0.51
LINC00565-201ENST00000562710 C9orf92A6NGG3 77 aa11.82□□□□□ -0.52
LINC00565-201ENST00000562710 C20orf166-AS1Q96NR2 134 aa11.82□□□□□ -0.52
LINC00565-201ENST00000562710 A8MUU9 505 aa11.82□□□□□ -0.52
LINC00565-201ENST00000562710 ADM2Q7Z4H4 148 aa11.81□□□□□ -0.52
LINC00565-201ENST00000562710 DYNC1H1Q14204 4646 aaKnown RBP11.75□□□□□ -0.53
LINC00565-201ENST00000562710 PKHD1L1Q86WI1 4243 aa11.73□□□□□ -0.53
LINC00565-201ENST00000562710 KRTAP3-1Q9BYR8 98 aa11.71□□□□□ -0.54
LINC00565-201ENST00000562710 KRTAP10-4P60372 401 aaPredicted RBP11.7□□□□□ -0.54
LINC00565-201ENST00000562710 APOBP04114 4563 aaKnown RBP11.67□□□□□ -0.54
LINC00565-201ENST00000562710 FAT1Q14517 4588 aa11.66□□□□□ -0.54
LINC00565-201ENST00000562710 KRTAP21-3Q3LHN1 58 aa11.65□□□□□ -0.54
LINC00565-201ENST00000562710 A0A1B0GVY2 172 aa11.64□□□□□ -0.55
LINC00565-201ENST00000562710 H0YAA0 97 aa11.61□□□□□ -0.55
LINC00565-201ENST00000562710 A0A1B0GU33 70 aa11.54□□□□□ -0.56
LINC00565-201ENST00000562710 LINC01554Q52M75 96 aa11.51□□□□□ -0.57
LINC00565-201ENST00000562710 H1FX-AS1Q4G0G2 97 aa11.49□□□□□ -0.57
LINC00565-201ENST00000562710 CSAG1Q6PB30 78 aa11.49□□□□□ -0.57
LINC00565-201ENST00000562710 FLG2Q5D862 2391 aaPredicted RBP11.49□□□□□ -0.57
LINC00565-201ENST00000562710 COX6B2Q6YFQ2 88 aa11.49□□□□□ -0.57
LINC00565-201ENST00000562710 H3BS24 57 aa11.36□□□□□ -0.59
LINC00565-201ENST00000562710 RYR2Q92736 4967 aa11.32□□□□□ -0.6
LINC00565-201ENST00000562710 FAT3Q8TDW7 4589 aa11.32□□□□□ -0.6
LINC00565-201ENST00000562710 TNXBP22105 4242 aa11.28□□□□□ -0.6
LINC00565-201ENST00000562710 KRTAP10-8P60410 259 aa11.26□□□□□ -0.61
LINC00565-201ENST00000562710 LRP1Q07954 4544 aaKnown RBP11.25□□□□□ -0.61
LINC00565-201ENST00000562710 RPL37P61927 97 aaKnown RBP11.22□□□□□ -0.61
LINC00565-201ENST00000562710 KRTAP3-3Q9BYR6 98 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms