RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LINC00313P59037 77 aa8.48□□□□□ -1.05
RABGGTA-220ENST00000560998 SPACA4Q8TDM5 124 aa8.46□□□□□ -1.05
RABGGTA-220ENST00000560998 PLA2G1BP04054 148 aaKnown RBP8.46□□□□□ -1.06
RABGGTA-220ENST00000560998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.45□□□□□ -1.06
RABGGTA-220ENST00000560998 DNHD1Q96M86 4753 aa8.44□□□□□ -1.06
RABGGTA-220ENST00000560998 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
RABGGTA-220ENST00000560998 C8orf17Q9NRJ1 99 aa8.43□□□□□ -1.06
RABGGTA-220ENST00000560998 HECTD4Q9Y4D8 3996 aa8.43□□□□□ -1.06
RABGGTA-220ENST00000560998 SRRM2Q9UQ35 2752 aaKnown RBP8.41□□□□□ -1.06
RABGGTA-220ENST00000560998 DNAH17Q9UFH2 4485 aa8.41□□□□□ -1.06
RABGGTA-220ENST00000560998 RTL8CO15255 209 aa8.41□□□□□ -1.06
RABGGTA-220ENST00000560998 LINC01554Q52M75 96 aa8.4□□□□□ -1.06
RABGGTA-220ENST00000560998 Q96NJ1 140 aa8.39□□□□□ -1.07
RABGGTA-220ENST00000560998 DNAH2Q9P225 4427 aa8.38□□□□□ -1.07
RABGGTA-220ENST00000560998 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
RABGGTA-220ENST00000560998 A0A1B0GVX0 72 aa8.36□□□□□ -1.07
RABGGTA-220ENST00000560998 MRPL34Q9BQ48 92 aaKnown RBP8.36□□□□□ -1.07
RABGGTA-220ENST00000560998 C1orf134Q5TEV5 83 aa8.35□□□□□ -1.07
RABGGTA-220ENST00000560998 PRAC1Q96KF2 57 aa8.35□□□□□ -1.07
RABGGTA-220ENST00000560998 DNAH6Q9C0G6 4158 aa8.34□□□□□ -1.07
RABGGTA-220ENST00000560998 ACYP2P14621 99 aa8.34□□□□□ -1.07
RABGGTA-220ENST00000560998 FBN3Q75N90 2809 aa8.32□□□□□ -1.08
RABGGTA-220ENST00000560998 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
RABGGTA-220ENST00000560998 CDK2AP2O75956 126 aa8.31□□□□□ -1.08
RABGGTA-220ENST00000560998 SPATA8Q6RVD6 105 aa8.31□□□□□ -1.08
RABGGTA-220ENST00000560998 PRR26Q8N8Z3 221 aa8.31□□□□□ -1.08
RABGGTA-220ENST00000560998 LY6G6CO95867 125 aa8.31□□□□□ -1.08
RABGGTA-220ENST00000560998 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
RABGGTA-220ENST00000560998 TGP01266 2768 aa8.3□□□□□ -1.08
RABGGTA-220ENST00000560998 LINC00483Q53H64 154 aa8.3□□□□□ -1.08
RABGGTA-220ENST00000560998 IGHV6-1A0A0B4J1U7 121 aa8.29□□□□□ -1.08
RABGGTA-220ENST00000560998 DNAH8Q96JB1 4490 aa8.27□□□□□ -1.09
RABGGTA-220ENST00000560998 A0A1B0GU69 56 aa8.26□□□□□ -1.09
RABGGTA-220ENST00000560998 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
RABGGTA-220ENST00000560998 IGLV9-49A0A0B4J1Y8 123 aa8.26□□□□□ -1.09
RABGGTA-220ENST00000560998 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
RABGGTA-220ENST00000560998 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
RABGGTA-220ENST00000560998 H3BS24 57 aa8.25□□□□□ -1.09
RABGGTA-220ENST00000560998 ZNF861PO60384 105 aa8.24□□□□□ -1.09
RABGGTA-220ENST00000560998 KRTAP13-3Q3SY46 172 aa8.24□□□□□ -1.09
RABGGTA-220ENST00000560998 ALMS1Q8TCU4 4167 aa8.24□□□□□ -1.09
RABGGTA-220ENST00000560998 WWC2-AS2Q96NR7 200 aa8.22□□□□□ -1.09
RABGGTA-220ENST00000560998 UQCR11O14957 56 aa8.21□□□□□ -1.09
RABGGTA-220ENST00000560998 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.09
RABGGTA-220ENST00000560998 RETNLBQ9BQ08 111 aa8.21□□□□□ -1.09
RABGGTA-220ENST00000560998 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.1
RABGGTA-220ENST00000560998 DNAH11Q96DT5 4516 aa8.2□□□□□ -1.1
RABGGTA-220ENST00000560998 KRTAP10-2P60368 255 aa8.19□□□□□ -1.1
RABGGTA-220ENST00000560998 ANAPC11Q9NYG5 84 aa8.19□□□□□ -1.1
RABGGTA-220ENST00000560998 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
RABGGTA-220ENST00000560998 KRTAP21-3Q3LHN1 58 aa8.18□□□□□ -1.1
RABGGTA-220ENST00000560998 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
RABGGTA-220ENST00000560998 Q5W150 140 aa8.15□□□□□ -1.1
RABGGTA-220ENST00000560998 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
RABGGTA-220ENST00000560998 NOTCH2NLQ7Z3S9 236 aa8.13□□□□□ -1.11
RABGGTA-220ENST00000560998 PKD1P98161 4303 aa8.11□□□□□ -1.11
RABGGTA-220ENST00000560998 Q6ZSA8 131 aa8.1□□□□□ -1.11
RABGGTA-220ENST00000560998 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
RABGGTA-220ENST00000560998 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
RABGGTA-220ENST00000560998 HYDINQ4G0P3 5121 aa8.09□□□□□ -1.11
RABGGTA-220ENST00000560998 FAT2Q9NYQ8 4349 aa8.08□□□□□ -1.12
RABGGTA-220ENST00000560998 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
RABGGTA-220ENST00000560998 IGKV2-30P06310 120 aa8.04□□□□□ -1.12
RABGGTA-220ENST00000560998 SSBP3-AS1Q7Z2R9 100 aa8.02□□□□□ -1.12
RABGGTA-220ENST00000560998 LRP1BQ9NZR2 4599 aa8□□□□□ -1.13
RABGGTA-220ENST00000560998 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
RABGGTA-220ENST00000560998 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.14
RABGGTA-220ENST00000560998 SACSQ9NZJ4 4579 aa7.93□□□□□ -1.14
RABGGTA-220ENST00000560998 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
RABGGTA-220ENST00000560998 VPS13BQ7Z7G8 4022 aa7.91□□□□□ -1.14
RABGGTA-220ENST00000560998 IGKV2D-30A0A075B6S6 120 aa7.9□□□□□ -1.15
RABGGTA-220ENST00000560998 KRTAP25-1Q3LHN0 102 aa7.89□□□□□ -1.15
RABGGTA-220ENST00000560998 A8MUU9 505 aa7.86□□□□□ -1.15
RABGGTA-220ENST00000560998 PKHD1P08F94 4074 aa7.85□□□□□ -1.15
RABGGTA-220ENST00000560998 ROMO1P60602 79 aa7.85□□□□□ -1.15
RABGGTA-220ENST00000560998 KRTAP16-1A8MUX0 517 aa7.82□□□□□ -1.16
RABGGTA-220ENST00000560998 DYNC1H1Q14204 4646 aaKnown RBP7.81□□□□□ -1.16
RABGGTA-220ENST00000560998 TYMSOSQ8TAI1 123 aa7.79□□□□□ -1.16
RABGGTA-220ENST00000560998 A0A1B0GVY2 172 aa7.79□□□□□ -1.16
RABGGTA-220ENST00000560998 LINC00304Q8N9R0 145 aa7.77□□□□□ -1.17
RABGGTA-220ENST00000560998 H0YAA0 97 aa7.75□□□□□ -1.17
RABGGTA-220ENST00000560998 SPINK1P00995 79 aa7.75□□□□□ -1.17
RABGGTA-220ENST00000560998 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
RABGGTA-220ENST00000560998 RYR2Q92736 4967 aa7.72□□□□□ -1.17
RABGGTA-220ENST00000560998 APOBP04114 4563 aaKnown RBP7.71□□□□□ -1.18
RABGGTA-220ENST00000560998 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
RABGGTA-220ENST00000560998 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
RABGGTA-220ENST00000560998 A0A1B0GU33 70 aa7.66□□□□□ -1.18
RABGGTA-220ENST00000560998 K7ERS5 55 aa7.64□□□□□ -1.19
RABGGTA-220ENST00000560998 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
RABGGTA-220ENST00000560998 FAT1Q14517 4588 aa7.63□□□□□ -1.19
RABGGTA-220ENST00000560998 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
RABGGTA-220ENST00000560998 Q8N1X5 172 aa7.62□□□□□ -1.19
RABGGTA-220ENST00000560998 KMT2CQ8NEZ4 4911 aaKnown RBP7.59□□□□□ -1.19
RABGGTA-220ENST00000560998 P0C880 135 aa7.57□□□□□ -1.2
RABGGTA-220ENST00000560998 C9orf92A6NGG3 77 aa7.46□□□□□ -1.21
RABGGTA-220ENST00000560998 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
RABGGTA-220ENST00000560998 COX6B2Q6YFQ2 88 aa7.42□□□□□ -1.22
RABGGTA-220ENST00000560998 CRIPTQ9P021 101 aa7.42□□□□□ -1.22
RABGGTA-220ENST00000560998 HSPG2P98160 4391 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms