RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SPINK6Q6UWN8 80 aa6.78□□□□□ -1.32
SRP54-213ENST00000556994 Q75L30 129 aa6.78□□□□□ -1.32
SRP54-213ENST00000556994 LOC101927531A0A1B0GV80 90 aa6.78□□□□□ -1.32
SRP54-213ENST00000556994 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
SRP54-213ENST00000556994 HRES1P13985 223 aa6.77□□□□□ -1.33
SRP54-213ENST00000556994 A0A087WTM6 91 aa6.76□□□□□ -1.33
SRP54-213ENST00000556994 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
SRP54-213ENST00000556994 ZNF706Q9Y5V0 76 aaPredicted RBP6.76□□□□□ -1.33
SRP54-213ENST00000556994 RTL8CO15255 209 aa6.75□□□□□ -1.33
SRP54-213ENST00000556994 DNAH17Q9UFH2 4485 aa6.74□□□□□ -1.33
SRP54-213ENST00000556994 Q5W150 140 aa6.74□□□□□ -1.33
SRP54-213ENST00000556994 VPS13DQ5THJ4 4388 aa6.74□□□□□ -1.33
SRP54-213ENST00000556994 DNAH2Q9P225 4427 aa6.73□□□□□ -1.33
SRP54-213ENST00000556994 ZNF861PO60384 105 aa6.73□□□□□ -1.33
SRP54-213ENST00000556994 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
SRP54-213ENST00000556994 NUPR2A6NF83 97 aa6.72□□□□□ -1.33
SRP54-213ENST00000556994 TGP01266 2768 aa6.72□□□□□ -1.33
SRP54-213ENST00000556994 FBN3Q75N90 2809 aa6.71□□□□□ -1.33
SRP54-213ENST00000556994 CIRBP-AS1Q8TBR5 109 aa6.71□□□□□ -1.33
SRP54-213ENST00000556994 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.34
SRP54-213ENST00000556994 PLAC8Q9NZF1 115 aa6.71□□□□□ -1.34
SRP54-213ENST00000556994 SPINK7P58062 85 aa6.7□□□□□ -1.34
SRP54-213ENST00000556994 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
SRP54-213ENST00000556994 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
SRP54-213ENST00000556994 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
SRP54-213ENST00000556994 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
SRP54-213ENST00000556994 PRKDCP78527 4128 aaKnown RBP6.68□□□□□ -1.34
SRP54-213ENST00000556994 RETNLBQ9BQ08 111 aa6.66□□□□□ -1.34
SRP54-213ENST00000556994 KRTAP13-3Q3SY46 172 aa6.66□□□□□ -1.34
SRP54-213ENST00000556994 KTN1-AS1Q86SY8 53 aa6.66□□□□□ -1.34
SRP54-213ENST00000556994 ALMS1Q8TCU4 4167 aa6.66□□□□□ -1.34
SRP54-213ENST00000556994 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.35
SRP54-213ENST00000556994 A6NN06 94 aa6.65□□□□□ -1.35
SRP54-213ENST00000556994 IGLV7-43P04211 117 aa6.64□□□□□ -1.35
SRP54-213ENST00000556994 KRTAP21-3Q3LHN1 58 aa6.64□□□□□ -1.35
SRP54-213ENST00000556994 LCE2DQ5TA82 110 aaPredicted RBP6.61□□□□□ -1.35
SRP54-213ENST00000556994 ACYP2P14621 99 aa6.6□□□□□ -1.35
SRP54-213ENST00000556994 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
SRP54-213ENST00000556994 LINC00313P59037 77 aa6.58□□□□□ -1.36
SRP54-213ENST00000556994 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
SRP54-213ENST00000556994 C1orf134Q5TEV5 83 aa6.56□□□□□ -1.36
SRP54-213ENST00000556994 C8orf87E5RJ46 101 aa6.56□□□□□ -1.36
SRP54-213ENST00000556994 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
SRP54-213ENST00000556994 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
SRP54-213ENST00000556994 DNAH5Q8TE73 4624 aa6.54□□□□□ -1.36
SRP54-213ENST00000556994 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
SRP54-213ENST00000556994 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
SRP54-213ENST00000556994 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
SRP54-213ENST00000556994 KRTAP13-2Q52LG2 175 aa6.53□□□□□ -1.36
SRP54-213ENST00000556994 C7orf65Q6ZTY9 151 aa6.53□□□□□ -1.36
SRP54-213ENST00000556994 LY6G6CO95867 125 aa6.52□□□□□ -1.37
SRP54-213ENST00000556994 KRTAP10-2P60368 255 aa6.52□□□□□ -1.37
SRP54-213ENST00000556994 IGKV2-30P06310 120 aa6.51□□□□□ -1.37
SRP54-213ENST00000556994 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
SRP54-213ENST00000556994 A0A1B0GU69 56 aa6.49□□□□□ -1.37
SRP54-213ENST00000556994 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
SRP54-213ENST00000556994 KRTAP16-1A8MUX0 517 aa6.47□□□□□ -1.37
SRP54-213ENST00000556994 PRAC1Q96KF2 57 aa6.44□□□□□ -1.38
SRP54-213ENST00000556994 VPS13BQ7Z7G8 4022 aa6.44□□□□□ -1.38
SRP54-213ENST00000556994 KRTAP10-1P60331 282 aa6.43□□□□□ -1.38
SRP54-213ENST00000556994 ADM2Q7Z4H4 148 aa6.43□□□□□ -1.38
SRP54-213ENST00000556994 PKD1P98161 4303 aa6.42□□□□□ -1.38
SRP54-213ENST00000556994 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
SRP54-213ENST00000556994 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
SRP54-213ENST00000556994 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
SRP54-213ENST00000556994 HYDINQ4G0P3 5121 aa6.38□□□□□ -1.39
SRP54-213ENST00000556994 SPINK1P00995 79 aa6.38□□□□□ -1.39
SRP54-213ENST00000556994 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
SRP54-213ENST00000556994 UQCR11O14957 56 aa6.37□□□□□ -1.39
SRP54-213ENST00000556994 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
SRP54-213ENST00000556994 Q6ZSA8 131 aa6.36□□□□□ -1.39
SRP54-213ENST00000556994 Q8N1X5 172 aa6.36□□□□□ -1.39
SRP54-213ENST00000556994 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
SRP54-213ENST00000556994 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
SRP54-213ENST00000556994 J3QL48 77 aa6.25□□□□□ -1.41
SRP54-213ENST00000556994 C9orf92A6NGG3 77 aa6.24□□□□□ -1.41
SRP54-213ENST00000556994 LINC00304Q8N9R0 145 aa6.23□□□□□ -1.41
SRP54-213ENST00000556994 CSAG1Q6PB30 78 aa6.21□□□□□ -1.42
SRP54-213ENST00000556994 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
SRP54-213ENST00000556994 SMR3BP02814 79 aaPredicted RBP6.2□□□□□ -1.42
SRP54-213ENST00000556994 H0YAA0 97 aa6.17□□□□□ -1.42
SRP54-213ENST00000556994 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
SRP54-213ENST00000556994 SACSQ9NZJ4 4579 aa6.15□□□□□ -1.42
SRP54-213ENST00000556994 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
SRP54-213ENST00000556994 FAT1Q14517 4588 aa6.14□□□□□ -1.43
SRP54-213ENST00000556994 A8MUU9 505 aa6.12□□□□□ -1.43
SRP54-213ENST00000556994 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
SRP54-213ENST00000556994 C20orf166-AS1Q96NR2 134 aa6.11□□□□□ -1.43
SRP54-213ENST00000556994 A0A1B0GU33 70 aa6.1□□□□□ -1.43
SRP54-213ENST00000556994 DYNC1H1Q14204 4646 aaKnown RBP6.1□□□□□ -1.43
SRP54-213ENST00000556994 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
SRP54-213ENST00000556994 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
SRP54-213ENST00000556994 FLG2Q5D862 2391 aaPredicted RBP6.06□□□□□ -1.44
SRP54-213ENST00000556994 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
SRP54-213ENST00000556994 RYR3Q15413 4870 aa6.02□□□□□ -1.45
SRP54-213ENST00000556994 RYR2Q92736 4967 aa6.01□□□□□ -1.45
SRP54-213ENST00000556994 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
SRP54-213ENST00000556994 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
SRP54-213ENST00000556994 COX6B2Q6YFQ2 88 aa5.99□□□□□ -1.45
SRP54-213ENST00000556994 KRTAP25-1Q3LHN0 102 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms