RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 ASB16-AS1Q495Z4 193 aa8.82□□□□□ -1
LRP1-211ENST00000556356 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
LRP1-211ENST00000556356 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
LRP1-211ENST00000556356 FBN2P35556 2912 aa8.79□□□□□ -1
LRP1-211ENST00000556356 MXRA5Q9NR99 2828 aa8.78□□□□□ -1
LRP1-211ENST00000556356 PDZD2O15018 2839 aa8.74□□□□□ -1.01
LRP1-211ENST00000556356 Q5XG85 94 aa8.73□□□□□ -1.01
LRP1-211ENST00000556356 CRIPTQ9P021 101 aa8.71□□□□□ -1.01
LRP1-211ENST00000556356 A0A1B0GU33 70 aa8.71□□□□□ -1.02
LRP1-211ENST00000556356 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
LRP1-211ENST00000556356 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
LRP1-211ENST00000556356 Q75L30 129 aa8.67□□□□□ -1.02
LRP1-211ENST00000556356 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
LRP1-211ENST00000556356 FLG2Q5D862 2391 aaPredicted RBP8.65□□□□□ -1.02
LRP1-211ENST00000556356 RELNP78509 3460 aa8.63□□□□□ -1.03
LRP1-211ENST00000556356 R4GN34 69 aa8.61□□□□□ -1.03
LRP1-211ENST00000556356 DMAC1Q96GE9 116 aa8.59□□□□□ -1.03
LRP1-211ENST00000556356 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
LRP1-211ENST00000556356 TENM2Q9NT68 2774 aa8.57□□□□□ -1.04
LRP1-211ENST00000556356 LINC01558Q9Y6Z2 57 aa8.57□□□□□ -1.04
LRP1-211ENST00000556356 DCHS1Q96JQ0 3298 aa8.56□□□□□ -1.04
LRP1-211ENST00000556356 OTOGQ6ZRI0 2925 aa8.54□□□□□ -1.04
LRP1-211ENST00000556356 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
LRP1-211ENST00000556356 TENM1Q9UKZ4 2725 aa8.52□□□□□ -1.05
LRP1-211ENST00000556356 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
LRP1-211ENST00000556356 TENM3Q9P273 2699 aa8.49□□□□□ -1.05
LRP1-211ENST00000556356 MUC3AQ02505 3323 aa8.49□□□□□ -1.05
LRP1-211ENST00000556356 LAMA5O15230 3695 aa8.48□□□□□ -1.05
LRP1-211ENST00000556356 CELSR1Q9NYQ6 3014 aa8.47□□□□□ -1.05
LRP1-211ENST00000556356 A0A1B0GVY2 172 aa8.46□□□□□ -1.06
LRP1-211ENST00000556356 M0QZ58 72 aa8.46□□□□□ -1.06
LRP1-211ENST00000556356 Q5VV11 94 aa8.45□□□□□ -1.06
LRP1-211ENST00000556356 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
LRP1-211ENST00000556356 A8MUU9 505 aa8.41□□□□□ -1.06
LRP1-211ENST00000556356 DMDP11532 3685 aa8.41□□□□□ -1.06
LRP1-211ENST00000556356 NBPF19A0A087WUL8 3843 aa8.4□□□□□ -1.06
LRP1-211ENST00000556356 H3BS24 57 aa8.4□□□□□ -1.07
LRP1-211ENST00000556356 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
LRP1-211ENST00000556356 WDFY3Q8IZQ1 3526 aa8.37□□□□□ -1.07
LRP1-211ENST00000556356 LUZP6Q538Z0 58 aa8.36□□□□□ -1.07
LRP1-211ENST00000556356 ASPMQ8IZT6 3477 aa8.35□□□□□ -1.07
LRP1-211ENST00000556356 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
LRP1-211ENST00000556356 XP32Q5T750 250 aa8.32□□□□□ -1.08
LRP1-211ENST00000556356 PRAC1Q96KF2 57 aa8.31□□□□□ -1.08
LRP1-211ENST00000556356 PKD1L1Q8TDX9 2849 aa8.31□□□□□ -1.08
LRP1-211ENST00000556356 TPRXLQ17RH7 258 aa8.3□□□□□ -1.08
LRP1-211ENST00000556356 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
LRP1-211ENST00000556356 ZFHX4Q86UP3 3567 aa8.22□□□□□ -1.09
LRP1-211ENST00000556356 VWFP04275 2813 aa8.22□□□□□ -1.09
LRP1-211ENST00000556356 FBN1P35555 2871 aaKnown RBP8.22□□□□□ -1.09
LRP1-211ENST00000556356 ZFHX3Q15911 3703 aa8.2□□□□□ -1.1
LRP1-211ENST00000556356 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
LRP1-211ENST00000556356 KRTAP10-8P60410 259 aa8.19□□□□□ -1.1
LRP1-211ENST00000556356 TGP01266 2768 aa8.17□□□□□ -1.1
LRP1-211ENST00000556356 A0A0A0MQY5 61 aa8.15□□□□□ -1.1
LRP1-211ENST00000556356 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.11
LRP1-211ENST00000556356 SMG1Q96Q15 3661 aaKnown RBP8.13□□□□□ -1.11
LRP1-211ENST00000556356 ROMO1P60602 79 aa8.09□□□□□ -1.11
LRP1-211ENST00000556356 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
LRP1-211ENST00000556356 A6NN06 94 aa8.04□□□□□ -1.12
LRP1-211ENST00000556356 CSMD1Q96PZ7 3565 aa8□□□□□ -1.13
LRP1-211ENST00000556356 A8MU10 97 aa7.95□□□□□ -1.14
LRP1-211ENST00000556356 SPENQ96T58 3664 aaKnown RBP7.93□□□□□ -1.14
LRP1-211ENST00000556356 CSMD2Q7Z408 3487 aa7.91□□□□□ -1.14
LRP1-211ENST00000556356 BSNQ9UPA5 3926 aa7.9□□□□□ -1.14
LRP1-211ENST00000556356 FBN3Q75N90 2809 aa7.87□□□□□ -1.15
LRP1-211ENST00000556356 KRTAP25-1Q3LHN0 102 aa7.87□□□□□ -1.15
LRP1-211ENST00000556356 KRTAP10-10P60014 251 aa7.85□□□□□ -1.15
LRP1-211ENST00000556356 TRRAPQ9Y4A5 3859 aa7.82□□□□□ -1.16
LRP1-211ENST00000556356 SVEP1Q4LDE5 3571 aa7.77□□□□□ -1.16
LRP1-211ENST00000556356 TNP1P09430 55 aa7.76□□□□□ -1.17
LRP1-211ENST00000556356 MT1HL1P0DM35 61 aa7.65□□□□□ -1.18
LRP1-211ENST00000556356 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.18
LRP1-211ENST00000556356 MEGF8Q7Z7M0 2845 aa7.64□□□□□ -1.19
LRP1-211ENST00000556356 SRRM2Q9UQ35 2752 aaKnown RBP7.63□□□□□ -1.19
LRP1-211ENST00000556356 PRO2289Q9P1D8 64 aa7.59□□□□□ -1.19
LRP1-211ENST00000556356 P0C880 135 aa7.58□□□□□ -1.2
LRP1-211ENST00000556356 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
LRP1-211ENST00000556356 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
LRP1-211ENST00000556356 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
LRP1-211ENST00000556356 CUBNO60494 3623 aa7.53□□□□□ -1.2
LRP1-211ENST00000556356 ALMS1Q8TCU4 4167 aa7.53□□□□□ -1.2
LRP1-211ENST00000556356 COL7A1Q02388 2944 aa7.52□□□□□ -1.21
LRP1-211ENST00000556356 H0YAA0 97 aa7.5□□□□□ -1.21
LRP1-211ENST00000556356 AKAP9Q99996 3911 aa7.45□□□□□ -1.22
LRP1-211ENST00000556356 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
LRP1-211ENST00000556356 DNAH9Q9NYC9 4486 aa7.42□□□□□ -1.22
LRP1-211ENST00000556356 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
LRP1-211ENST00000556356 ZNF469Q96JG9 3925 aaPredicted RBP7.33□□□□□ -1.24
LRP1-211ENST00000556356 VPS13CQ709C8 3753 aa7.33□□□□□ -1.24
LRP1-211ENST00000556356 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
LRP1-211ENST00000556356 DNHD1Q96M86 4753 aa7.26□□□□□ -1.25
LRP1-211ENST00000556356 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
LRP1-211ENST00000556356 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
LRP1-211ENST00000556356 DNAH11Q96DT5 4516 aa7.1□□□□□ -1.27
LRP1-211ENST00000556356 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
LRP1-211ENST00000556356 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
LRP1-211ENST00000556356 DNAH1Q9P2D7 4330 aa7.07□□□□□ -1.28
LRP1-211ENST00000556356 KRTAP13-4Q3LI77 160 aa7.05□□□□□ -1.28
LRP1-211ENST00000556356 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms