RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 LOC101927531A0A1B0GV80 90 aa9.87□□□□□ -0.83
XRCC3-209ENST00000554913 TGP01266 2768 aa9.87□□□□□ -0.83
XRCC3-209ENST00000554913 Q75L30 129 aa9.86□□□□□ -0.83
XRCC3-209ENST00000554913 NUPR2A6NF83 97 aa9.86□□□□□ -0.83
XRCC3-209ENST00000554913 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
XRCC3-209ENST00000554913 SPAG11AQ6PDA7 123 aa9.85□□□□□ -0.83
XRCC3-209ENST00000554913 LCA10Q71F78 164 aa9.85□□□□□ -0.83
XRCC3-209ENST00000554913 RTL8CO15255 209 aa9.84□□□□□ -0.83
XRCC3-209ENST00000554913 DNAH8Q96JB1 4490 aa9.83□□□□□ -0.84
XRCC3-209ENST00000554913 A6NED7 52 aa9.83□□□□□ -0.84
XRCC3-209ENST00000554913 ZNF861PO60384 105 aa9.83□□□□□ -0.84
XRCC3-209ENST00000554913 FBN3Q75N90 2809 aa9.83□□□□□ -0.84
XRCC3-209ENST00000554913 DNAH2Q9P225 4427 aa9.83□□□□□ -0.84
XRCC3-209ENST00000554913 HRES1P13985 223 aa9.83□□□□□ -0.84
XRCC3-209ENST00000554913 SPINK6Q6UWN8 80 aa9.82□□□□□ -0.84
XRCC3-209ENST00000554913 HECTD4Q9Y4D8 3996 aa9.81□□□□□ -0.84
XRCC3-209ENST00000554913 SPTSSBQ8NFR3 76 aa9.81□□□□□ -0.84
XRCC3-209ENST00000554913 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
XRCC3-209ENST00000554913 LINC01558Q9Y6Z2 57 aa9.79□□□□□ -0.84
XRCC3-209ENST00000554913 Q5W150 140 aa9.79□□□□□ -0.84
XRCC3-209ENST00000554913 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
XRCC3-209ENST00000554913 ATP11AUNQ6ZP68 121 aa9.73□□□□□ -0.85
XRCC3-209ENST00000554913 KRTAP13-3Q3SY46 172 aa9.73□□□□□ -0.85
XRCC3-209ENST00000554913 CDC42SE1Q9NRR8 79 aa9.72□□□□□ -0.85
XRCC3-209ENST00000554913 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
XRCC3-209ENST00000554913 DNAH17Q9UFH2 4485 aa9.7□□□□□ -0.86
XRCC3-209ENST00000554913 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
XRCC3-209ENST00000554913 SPINK7P58062 85 aa9.7□□□□□ -0.86
XRCC3-209ENST00000554913 A6NN06 94 aa9.64□□□□□ -0.87
XRCC3-209ENST00000554913 KTN1-AS1Q86SY8 53 aa9.64□□□□□ -0.87
XRCC3-209ENST00000554913 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
XRCC3-209ENST00000554913 HYDINQ4G0P3 5121 aa9.61□□□□□ -0.87
XRCC3-209ENST00000554913 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
XRCC3-209ENST00000554913 C8orf87E5RJ46 101 aa9.59□□□□□ -0.87
XRCC3-209ENST00000554913 ACYP2P14621 99 aa9.59□□□□□ -0.87
XRCC3-209ENST00000554913 SSBP3-AS1Q7Z2R9 100 aa9.59□□□□□ -0.87
XRCC3-209ENST00000554913 DNAH6Q9C0G6 4158 aa9.59□□□□□ -0.87
XRCC3-209ENST00000554913 C1orf134Q5TEV5 83 aa9.59□□□□□ -0.87
XRCC3-209ENST00000554913 ALMS1Q8TCU4 4167 aa9.57□□□□□ -0.88
XRCC3-209ENST00000554913 LINC00313P59037 77 aa9.57□□□□□ -0.88
XRCC3-209ENST00000554913 DMAC1Q96GE9 116 aa9.54□□□□□ -0.88
XRCC3-209ENST00000554913 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
XRCC3-209ENST00000554913 DNAH11Q96DT5 4516 aa9.52□□□□□ -0.88
XRCC3-209ENST00000554913 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
XRCC3-209ENST00000554913 KRTAP13-2Q52LG2 175 aa9.51□□□□□ -0.89
XRCC3-209ENST00000554913 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
XRCC3-209ENST00000554913 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
XRCC3-209ENST00000554913 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
XRCC3-209ENST00000554913 LY6G6CO95867 125 aa9.48□□□□□ -0.89
XRCC3-209ENST00000554913 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.9
XRCC3-209ENST00000554913 C7orf65Q6ZTY9 151 aa9.46□□□□□ -0.9
XRCC3-209ENST00000554913 KRTAP21-3Q3LHN1 58 aa9.45□□□□□ -0.9
XRCC3-209ENST00000554913 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
XRCC3-209ENST00000554913 PKD1P98161 4303 aa9.43□□□□□ -0.9
XRCC3-209ENST00000554913 A0A1B0GU69 56 aa9.41□□□□□ -0.9
XRCC3-209ENST00000554913 SACSQ9NZJ4 4579 aa9.39□□□□□ -0.91
XRCC3-209ENST00000554913 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
XRCC3-209ENST00000554913 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
XRCC3-209ENST00000554913 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
XRCC3-209ENST00000554913 KRTAP1-4P0C5Y4 121 aa9.36□□□□□ -0.91
XRCC3-209ENST00000554913 Q6ZSA8 131 aa9.33□□□□□ -0.92
XRCC3-209ENST00000554913 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
XRCC3-209ENST00000554913 SPATA8Q6RVD6 105 aa9.31□□□□□ -0.92
XRCC3-209ENST00000554913 PRAC1Q96KF2 57 aa9.28□□□□□ -0.92
XRCC3-209ENST00000554913 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
XRCC3-209ENST00000554913 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
XRCC3-209ENST00000554913 PLA2G1BP04054 148 aaKnown RBP9.26□□□□□ -0.93
XRCC3-209ENST00000554913 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
XRCC3-209ENST00000554913 UQCR11O14957 56 aa9.25□□□□□ -0.93
XRCC3-209ENST00000554913 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
XRCC3-209ENST00000554913 H3BS24 57 aa9.21□□□□□ -0.94
XRCC3-209ENST00000554913 SPINK1P00995 79 aa9.2□□□□□ -0.94
XRCC3-209ENST00000554913 Q8N1X5 172 aa9.2□□□□□ -0.94
XRCC3-209ENST00000554913 KMT2CQ8NEZ4 4911 aaKnown RBP9.2□□□□□ -0.94
XRCC3-209ENST00000554913 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
XRCC3-209ENST00000554913 RYR2Q92736 4967 aa9.1□□□□□ -0.95
XRCC3-209ENST00000554913 LINC00304Q8N9R0 145 aa9.09□□□□□ -0.95
XRCC3-209ENST00000554913 FAT1Q14517 4588 aa9.04□□□□□ -0.96
XRCC3-209ENST00000554913 C9orf92A6NGG3 77 aa9.02□□□□□ -0.96
XRCC3-209ENST00000554913 RPS29P62273 56 aaKnown RBP9□□□□□ -0.97
XRCC3-209ENST00000554913 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
XRCC3-209ENST00000554913 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
XRCC3-209ENST00000554913 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
XRCC3-209ENST00000554913 KRTAP3-1Q9BYR8 98 aa8.97□□□□□ -0.97
XRCC3-209ENST00000554913 CSAG1Q6PB30 78 aa8.96□□□□□ -0.98
XRCC3-209ENST00000554913 A8MUU9 505 aa8.95□□□□□ -0.98
XRCC3-209ENST00000554913 H0YAA0 97 aa8.95□□□□□ -0.98
XRCC3-209ENST00000554913 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
XRCC3-209ENST00000554913 RYR3Q15413 4870 aa8.93□□□□□ -0.98
XRCC3-209ENST00000554913 A0A1B0GVY2 172 aa8.89□□□□□ -0.99
XRCC3-209ENST00000554913 A0A1B0GU33 70 aa8.86□□□□□ -0.99
XRCC3-209ENST00000554913 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
XRCC3-209ENST00000554913 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
XRCC3-209ENST00000554913 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
XRCC3-209ENST00000554913 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
XRCC3-209ENST00000554913 HSPG2P98160 4391 aa8.73□□□□□ -1.01
XRCC3-209ENST00000554913 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
XRCC3-209ENST00000554913 LRP1Q07954 4544 aaKnown RBP8.71□□□□□ -1.02
XRCC3-209ENST00000554913 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
XRCC3-209ENST00000554913 RYR1P21817 5038 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms