RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 FLNCQ14315 2725 aa3.65□□□□□ -1.82
LINC02388-201ENST00000550678 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.82
LINC02388-201ENST00000550678 APCP25054 2843 aa3.65□□□□□ -1.83
LINC02388-201ENST00000550678 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
LINC02388-201ENST00000550678 USP9XQ93008 2570 aaPredicted RBP3.64□□□□□ -1.83
LINC02388-201ENST00000550678 VPS13CQ709C8 3753 aa3.64□□□□□ -1.83
LINC02388-201ENST00000550678 SPART-AS1P0CW21 52 aa3.63□□□□□ -1.83
LINC02388-201ENST00000550678 KRTAP21-3Q3LHN1 58 aa3.63□□□□□ -1.83
LINC02388-201ENST00000550678 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
LINC02388-201ENST00000550678 UNC79Q9P2D8 2635 aa3.63□□□□□ -1.83
LINC02388-201ENST00000550678 MYO9AB2RTY4 2548 aa3.63□□□□□ -1.83
LINC02388-201ENST00000550678 DEFB135Q30KP9 77 aa3.63□□□□□ -1.83
LINC02388-201ENST00000550678 PSORS1C2Q9UIG4 136 aa3.63□□□□□ -1.83
LINC02388-201ENST00000550678 SPRR1BP22528 89 aa3.62□□□□□ -1.83
LINC02388-201ENST00000550678 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
LINC02388-201ENST00000550678 SPACA4Q8TDM5 124 aa3.62□□□□□ -1.83
LINC02388-201ENST00000550678 PRLHP81277 87 aa3.62□□□□□ -1.83
LINC02388-201ENST00000550678 UTP20O75691 2785 aaKnown RBP3.61□□□□□ -1.83
LINC02388-201ENST00000550678 NBEAL2Q6ZNJ1 2754 aa3.61□□□□□ -1.83
LINC02388-201ENST00000550678 MRPL34Q9BQ48 92 aaKnown RBP3.61□□□□□ -1.83
LINC02388-201ENST00000550678 NF1P21359 2839 aa3.6□□□□□ -1.83
LINC02388-201ENST00000550678 KRTAP1-1Q07627 177 aa3.6□□□□□ -1.83
LINC02388-201ENST00000550678 CSMD2Q7Z408 3487 aa3.6□□□□□ -1.83
LINC02388-201ENST00000550678 MXRA5Q9NR99 2828 aa3.6□□□□□ -1.83
LINC02388-201ENST00000550678 TEX15Q9BXT5 2789 aa3.59□□□□□ -1.83
LINC02388-201ENST00000550678 H3BNG1 76 aa3.59□□□□□ -1.83
LINC02388-201ENST00000550678 LINC01556Q5JQF7 62 aa3.59□□□□□ -1.83
LINC02388-201ENST00000550678 OTOGQ6ZRI0 2925 aa3.59□□□□□ -1.84
LINC02388-201ENST00000550678 ABCA12Q86UK0 2595 aa3.59□□□□□ -1.84
LINC02388-201ENST00000550678 K7EIL1 84 aa3.58□□□□□ -1.84
LINC02388-201ENST00000550678 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
LINC02388-201ENST00000550678 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
LINC02388-201ENST00000550678 NIPBLQ6KC79 2804 aaeCLIP3.58□□□□□ -1.84
LINC02388-201ENST00000550678 FBN2P35556 2912 aa3.56□□□□□ -1.84
LINC02388-201ENST00000550678 CELSR2Q9HCU4 2923 aa3.56□□□□□ -1.84
LINC02388-201ENST00000550678 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
LINC02388-201ENST00000550678 A0A096LNI7 61 aa3.56□□□□□ -1.84
LINC02388-201ENST00000550678 KRTAP24-1Q3LI83 254 aa3.56□□□□□ -1.84
LINC02388-201ENST00000550678 ITPR2Q14571 2701 aa3.56□□□□□ -1.84
LINC02388-201ENST00000550678 NOTCH2Q04721 2471 aa3.55□□□□□ -1.84
LINC02388-201ENST00000550678 ZANQ9Y493 2812 aa3.55□□□□□ -1.84
LINC02388-201ENST00000550678 F8P00451 2351 aa3.55□□□□□ -1.84
LINC02388-201ENST00000550678 CUBNO60494 3623 aa3.54□□□□□ -1.84
LINC02388-201ENST00000550678 POLQO75417 2590 aa3.54□□□□□ -1.84
LINC02388-201ENST00000550678 LY6G6CO95867 125 aa3.53□□□□□ -1.84
LINC02388-201ENST00000550678 KRTAP10-9P60411 292 aa3.53□□□□□ -1.84
LINC02388-201ENST00000550678 CENPEQ02224 2701 aa3.53□□□□□ -1.84
LINC02388-201ENST00000550678 SONP18583 2426 aaKnown RBP3.53□□□□□ -1.84
LINC02388-201ENST00000550678 PDZD2O15018 2839 aa3.52□□□□□ -1.85
LINC02388-201ENST00000550678 TENM2Q9NT68 2774 aa3.52□□□□□ -1.85
LINC02388-201ENST00000550678 HIVEP2P31629 2446 aa3.51□□□□□ -1.85
LINC02388-201ENST00000550678 KRTAP9-7A8MTY7 169 aa3.49□□□□□ -1.85
LINC02388-201ENST00000550678 KRTAP10-2P60368 255 aa3.49□□□□□ -1.85
LINC02388-201ENST00000550678 KRTAP10-3P60369 221 aa3.49□□□□□ -1.85
LINC02388-201ENST00000550678 SETD2Q9BYW2 2564 aaPredicted RBP3.49□□□□□ -1.85
LINC02388-201ENST00000550678 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
LINC02388-201ENST00000550678 C14orf177Q52M58 125 aa3.48□□□□□ -1.85
LINC02388-201ENST00000550678 CCDC168Q8NDH2 2452 aa3.48□□□□□ -1.85
LINC02388-201ENST00000550678 HIVEP1P15822 2718 aa3.47□□□□□ -1.85
LINC02388-201ENST00000550678 MTORP42345 2549 aa3.47□□□□□ -1.85
LINC02388-201ENST00000550678 TEP1Q99973 2627 aaKnown RBP3.47□□□□□ -1.85
LINC02388-201ENST00000550678 KRTAP13-1Q8IUC0 172 aa3.47□□□□□ -1.85
LINC02388-201ENST00000550678 ITPR3Q14573 2671 aa3.46□□□□□ -1.85
LINC02388-201ENST00000550678 ANK3Q12955 4377 aaKnown RBP3.46□□□□□ -1.86
LINC02388-201ENST00000550678 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
LINC02388-201ENST00000550678 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
LINC02388-201ENST00000550678 ZNF469Q96JG9 3925 aaPredicted RBP3.45□□□□□ -1.86
LINC02388-201ENST00000550678 H0YAA0 97 aa3.45□□□□□ -1.86
LINC02388-201ENST00000550678 FLNAP21333 2647 aaKnown RBP3.44□□□□□ -1.86
LINC02388-201ENST00000550678 DNAH1Q9P2D7 4330 aa3.44□□□□□ -1.86
LINC02388-201ENST00000550678 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
LINC02388-201ENST00000550678 Q6ZSA8 131 aa3.43□□□□□ -1.86
LINC02388-201ENST00000550678 PLAC4Q8WY50 150 aa3.43□□□□□ -1.86
LINC02388-201ENST00000550678 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
LINC02388-201ENST00000550678 SPINK6Q6UWN8 80 aa3.42□□□□□ -1.86
LINC02388-201ENST00000550678 NSD1Q96L73 2696 aaPredicted RBP3.42□□□□□ -1.86
LINC02388-201ENST00000550678 INE1O15225 51 aa3.42□□□□□ -1.86
LINC02388-201ENST00000550678 SMR3AQ99954 134 aa3.42□□□□□ -1.86
LINC02388-201ENST00000550678 ACANP16112 2415 aa3.4□□□□□ -1.87
LINC02388-201ENST00000550678 SPINK1P00995 79 aa3.39□□□□□ -1.87
LINC02388-201ENST00000550678 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
LINC02388-201ENST00000550678 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
LINC02388-201ENST00000550678 VWFP04275 2813 aa3.35□□□□□ -1.87
LINC02388-201ENST00000550678 PKD1L1Q8TDX9 2849 aa3.34□□□□□ -1.87
LINC02388-201ENST00000550678 TRRAPQ9Y4A5 3859 aa3.34□□□□□ -1.87
LINC02388-201ENST00000550678 Q6ZRN7 208 aaPredicted RBP3.34□□□□□ -1.88
LINC02388-201ENST00000550678 FBN3Q75N90 2809 aa3.33□□□□□ -1.88
LINC02388-201ENST00000550678 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
LINC02388-201ENST00000550678 KRTAP1-5Q9BYS1 174 aa3.32□□□□□ -1.88
LINC02388-201ENST00000550678 KRTAP10-11P60412 298 aa3.31□□□□□ -1.88
LINC02388-201ENST00000550678 CSMD3Q7Z407 3707 aa3.3□□□□□ -1.88
LINC02388-201ENST00000550678 COL6A5A8TX70 2615 aa3.3□□□□□ -1.88
LINC02388-201ENST00000550678 ATRQ13535 2644 aa3.3□□□□□ -1.88
LINC02388-201ENST00000550678 DNAH10Q8IVF4 4471 aa3.29□□□□□ -1.88
LINC02388-201ENST00000550678 TENM3Q9P273 2699 aa3.27□□□□□ -1.89
LINC02388-201ENST00000550678 STAB1Q9NY15 2570 aa3.27□□□□□ -1.89
LINC02388-201ENST00000550678 DNHD1Q96M86 4753 aa3.27□□□□□ -1.89
LINC02388-201ENST00000550678 FBN1P35555 2871 aaKnown RBP3.26□□□□□ -1.89
LINC02388-201ENST00000550678 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
LINC02388-201ENST00000550678 DNAH8Q96JB1 4490 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms