RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 STARD9Q9P2P6 4700 aa8.23□□□□□ -1.09
HDAC7-228ENST00000548938 CDC42SE1Q9NRR8 79 aa8.23□□□□□ -1.09
HDAC7-228ENST00000548938 FBN3Q75N90 2809 aa8.22□□□□□ -1.09
HDAC7-228ENST00000548938 A0A087X002 238 aa8.22□□□□□ -1.09
HDAC7-228ENST00000548938 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
HDAC7-228ENST00000548938 LINC00483Q53H64 154 aa8.21□□□□□ -1.1
HDAC7-228ENST00000548938 MRPL34Q9BQ48 92 aaKnown RBP8.21□□□□□ -1.1
HDAC7-228ENST00000548938 A6NN06 94 aa8.2□□□□□ -1.1
HDAC7-228ENST00000548938 CDK2AP2O75956 126 aa8.19□□□□□ -1.1
HDAC7-228ENST00000548938 WWC2-AS2Q96NR7 200 aa8.19□□□□□ -1.1
HDAC7-228ENST00000548938 ANAPC11Q9NYG5 84 aa8.19□□□□□ -1.1
HDAC7-228ENST00000548938 SPACA4Q8TDM5 124 aa8.19□□□□□ -1.1
HDAC7-228ENST00000548938 NBDYA0A0U1RRE5 68 aa8.18□□□□□ -1.1
HDAC7-228ENST00000548938 SPINK7P58062 85 aa8.18□□□□□ -1.1
HDAC7-228ENST00000548938 KRTAP21-3Q3LHN1 58 aa8.18□□□□□ -1.1
HDAC7-228ENST00000548938 Q6ZRN7 208 aaPredicted RBP8.17□□□□□ -1.1
HDAC7-228ENST00000548938 VPS13DQ5THJ4 4388 aa8.17□□□□□ -1.1
HDAC7-228ENST00000548938 FRAS1Q86XX4 4008 aa8.17□□□□□ -1.1
HDAC7-228ENST00000548938 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
HDAC7-228ENST00000548938 TGP01266 2768 aa8.15□□□□□ -1.1
HDAC7-228ENST00000548938 ZNF706Q9Y5V0 76 aaPredicted RBP8.14□□□□□ -1.11
HDAC7-228ENST00000548938 Q5W150 140 aa8.13□□□□□ -1.11
HDAC7-228ENST00000548938 C7orf65Q6ZTY9 151 aa8.13□□□□□ -1.11
HDAC7-228ENST00000548938 PSORS1C2Q9UIG4 136 aa8.13□□□□□ -1.11
HDAC7-228ENST00000548938 HECTD4Q9Y4D8 3996 aa8.12□□□□□ -1.11
HDAC7-228ENST00000548938 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
HDAC7-228ENST00000548938 SPINK6Q6UWN8 80 aa8.12□□□□□ -1.11
HDAC7-228ENST00000548938 KMT2AQ03164 3969 aa8.1□□□□□ -1.11
HDAC7-228ENST00000548938 IGLV5-52A0A0A0MRZ9 124 aa8.09□□□□□ -1.11
HDAC7-228ENST00000548938 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.11
HDAC7-228ENST00000548938 ZNF861PO60384 105 aa8.07□□□□□ -1.12
HDAC7-228ENST00000548938 A0A087WTM6 91 aa8.05□□□□□ -1.12
HDAC7-228ENST00000548938 ALMS1Q8TCU4 4167 aa8.04□□□□□ -1.12
HDAC7-228ENST00000548938 DNAH2Q9P225 4427 aa8.03□□□□□ -1.12
HDAC7-228ENST00000548938 RTL8CO15255 209 aa8.03□□□□□ -1.12
HDAC7-228ENST00000548938 DNAH17Q9UFH2 4485 aa8.02□□□□□ -1.13
HDAC7-228ENST00000548938 CIRBP-AS1Q8TBR5 109 aa8.01□□□□□ -1.13
HDAC7-228ENST00000548938 ACYP2P14621 99 aa8.01□□□□□ -1.13
HDAC7-228ENST00000548938 LY6G6CO95867 125 aa8□□□□□ -1.13
HDAC7-228ENST00000548938 DMAC1Q96GE9 116 aa7.97□□□□□ -1.13
HDAC7-228ENST00000548938 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
HDAC7-228ENST00000548938 C1orf134Q5TEV5 83 aa7.96□□□□□ -1.14
HDAC7-228ENST00000548938 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
HDAC7-228ENST00000548938 LINC00313P59037 77 aa7.91□□□□□ -1.14
HDAC7-228ENST00000548938 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
HDAC7-228ENST00000548938 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
HDAC7-228ENST00000548938 A0A1B0GU69 56 aa7.9□□□□□ -1.14
HDAC7-228ENST00000548938 FAM229AH3BQW9 127 aa7.9□□□□□ -1.15
HDAC7-228ENST00000548938 PRAC1Q96KF2 57 aa7.9□□□□□ -1.15
HDAC7-228ENST00000548938 IGKV2-30P06310 120 aa7.88□□□□□ -1.15
HDAC7-228ENST00000548938 SSBP3-AS1Q7Z2R9 100 aa7.87□□□□□ -1.15
HDAC7-228ENST00000548938 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
HDAC7-228ENST00000548938 DNAH11Q96DT5 4516 aa7.85□□□□□ -1.15
HDAC7-228ENST00000548938 HYDINQ4G0P3 5121 aa7.84□□□□□ -1.16
HDAC7-228ENST00000548938 SPATA8Q6RVD6 105 aa7.83□□□□□ -1.16
HDAC7-228ENST00000548938 KRTAP16-1A8MUX0 517 aa7.81□□□□□ -1.16
HDAC7-228ENST00000548938 KRTAP10-2P60368 255 aa7.81□□□□□ -1.16
HDAC7-228ENST00000548938 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
HDAC7-228ENST00000548938 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
HDAC7-228ENST00000548938 MIR22HGQ0VDD5 57 aa7.8□□□□□ -1.16
HDAC7-228ENST00000548938 FAT2Q9NYQ8 4349 aa7.79□□□□□ -1.16
HDAC7-228ENST00000548938 DNAH5Q8TE73 4624 aa7.79□□□□□ -1.16
HDAC7-228ENST00000548938 PLA2G1BP04054 148 aaKnown RBP7.79□□□□□ -1.16
HDAC7-228ENST00000548938 UQCR11O14957 56 aa7.78□□□□□ -1.16
HDAC7-228ENST00000548938 PKD1P98161 4303 aa7.74□□□□□ -1.17
HDAC7-228ENST00000548938 SACSQ9NZJ4 4579 aa7.74□□□□□ -1.17
HDAC7-228ENST00000548938 LRP1BQ9NZR2 4599 aa7.74□□□□□ -1.17
HDAC7-228ENST00000548938 KRTAP10-1P60331 282 aa7.71□□□□□ -1.18
HDAC7-228ENST00000548938 Q6ZSA8 131 aa7.69□□□□□ -1.18
HDAC7-228ENST00000548938 SPINK1P00995 79 aa7.67□□□□□ -1.18
HDAC7-228ENST00000548938 KRTAP1-4P0C5Y4 121 aa7.66□□□□□ -1.18
HDAC7-228ENST00000548938 Q8N1X5 172 aa7.65□□□□□ -1.19
HDAC7-228ENST00000548938 PKHD1P08F94 4074 aa7.64□□□□□ -1.19
HDAC7-228ENST00000548938 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
HDAC7-228ENST00000548938 CSAG1Q6PB30 78 aa7.61□□□□□ -1.19
HDAC7-228ENST00000548938 TYMSOSQ8TAI1 123 aa7.56□□□□□ -1.2
HDAC7-228ENST00000548938 KMT2CQ8NEZ4 4911 aaKnown RBP7.55□□□□□ -1.2
HDAC7-228ENST00000548938 A0A1B0GVY2 172 aa7.52□□□□□ -1.21
HDAC7-228ENST00000548938 RYR2Q92736 4967 aa7.52□□□□□ -1.21
HDAC7-228ENST00000548938 H0YAA0 97 aa7.51□□□□□ -1.21
HDAC7-228ENST00000548938 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
HDAC7-228ENST00000548938 A8MUU9 505 aa7.45□□□□□ -1.22
HDAC7-228ENST00000548938 LINC00304Q8N9R0 145 aa7.44□□□□□ -1.22
HDAC7-228ENST00000548938 SMR3BP02814 79 aaPredicted RBP7.43□□□□□ -1.22
HDAC7-228ENST00000548938 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
HDAC7-228ENST00000548938 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
HDAC7-228ENST00000548938 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
HDAC7-228ENST00000548938 A0A1B0GU33 70 aa7.41□□□□□ -1.22
HDAC7-228ENST00000548938 FAT1Q14517 4588 aa7.4□□□□□ -1.22
HDAC7-228ENST00000548938 ROMO1P60602 79 aa7.38□□□□□ -1.23
HDAC7-228ENST00000548938 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
HDAC7-228ENST00000548938 RPS29P62273 56 aaKnown RBP7.37□□□□□ -1.23
HDAC7-228ENST00000548938 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
HDAC7-228ENST00000548938 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
HDAC7-228ENST00000548938 RYR3Q15413 4870 aa7.34□□□□□ -1.23
HDAC7-228ENST00000548938 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
HDAC7-228ENST00000548938 A0A0A0MQY5 61 aa7.31□□□□□ -1.24
HDAC7-228ENST00000548938 FLG2Q5D862 2391 aaPredicted RBP7.29□□□□□ -1.24
HDAC7-228ENST00000548938 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.24
HDAC7-228ENST00000548938 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms