RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.06□□□□□ -2.42
VBP1-203ENST00000535916 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.06□□□□□ -2.42
VBP1-203ENST00000535916 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
VBP1-203ENST00000535916 STAB1Q9NY15 2570 aa-0.07□□□□□ -2.42
VBP1-203ENST00000535916 SETXQ7Z333 2677 aaKnown RBP-0.07□□□□□ -2.42
VBP1-203ENST00000535916 FANCD2Q9BXW9 1451 aa-0.08□□□□□ -2.42
VBP1-203ENST00000535916 ABCA5Q8WWZ7 1642 aa-0.08□□□□□ -2.42
VBP1-203ENST00000535916 H3BNG1 76 aa-0.08□□□□□ -2.42
VBP1-203ENST00000535916 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
VBP1-203ENST00000535916 PRKDCP78527 4128 aaKnown RBP-0.08□□□□□ -2.42
VBP1-203ENST00000535916 LRP2P98164 4655 aa-0.08□□□□□ -2.42
VBP1-203ENST00000535916 PDE4DIPQ5VU43 2346 aa-0.09□□□□□ -2.42
VBP1-203ENST00000535916 TNRC18O15417 2968 aaPredicted RBP-0.09□□□□□ -2.42
VBP1-203ENST00000535916 TMEM167BQ9NRX6 74 aa-0.09□□□□□ -2.42
VBP1-203ENST00000535916 LMO7Q8WWI1 1683 aa-0.09□□□□□ -2.42
VBP1-203ENST00000535916 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
VBP1-203ENST00000535916 FAT3Q8TDW7 4589 aa-0.09□□□□□ -2.42
VBP1-203ENST00000535916 NF1P21359 2839 aa-0.09□□□□□ -2.42
VBP1-203ENST00000535916 HERC2O95714 4834 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 APC2O95996 2303 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 PDZD2O15018 2839 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 H3BUA1 57 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 MT1AP04731 61 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 EFCAB6Q5THR3 1501 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 DNHD1Q96M86 4753 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 BIRC6Q9NR09 4857 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 NBEAL1Q6ZS30 2694 aa-0.1□□□□□ -2.43
VBP1-203ENST00000535916 ABCC8Q09428 1581 aa-0.11□□□□□ -2.43
VBP1-203ENST00000535916 DSPP15924 2871 aaKnown RBP-0.11□□□□□ -2.43
VBP1-203ENST00000535916 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
VBP1-203ENST00000535916 IGLV5-48A0A075B6I7 105 aa-0.11□□□□□ -2.43
VBP1-203ENST00000535916 LINC00308Q8TCZ7 52 aa-0.11□□□□□ -2.43
VBP1-203ENST00000535916 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.11□□□□□ -2.43
VBP1-203ENST00000535916 STARD9Q9P2P6 4700 aa-0.11□□□□□ -2.43
VBP1-203ENST00000535916 HECTD4Q9Y4D8 3996 aa-0.11□□□□□ -2.43
VBP1-203ENST00000535916 WNK1Q9H4A3 2382 aa-0.11□□□□□ -2.43
VBP1-203ENST00000535916 KIF21BO75037 1637 aa-0.12□□□□□ -2.43
VBP1-203ENST00000535916 LRP1BQ9NZR2 4599 aa-0.12□□□□□ -2.43
VBP1-203ENST00000535916 KRTAP20-2Q3LI61 65 aa-0.12□□□□□ -2.43
VBP1-203ENST00000535916 KRTAP19-7Q3SYF9 63 aa-0.12□□□□□ -2.43
VBP1-203ENST00000535916 COL12A1Q99715 3063 aa-0.12□□□□□ -2.43
VBP1-203ENST00000535916 LAMA3Q16787 3333 aa-0.12□□□□□ -2.43
VBP1-203ENST00000535916 PRRC2CQ9Y520 2896 aaKnown RBP-0.12□□□□□ -2.43
VBP1-203ENST00000535916 SPRR2FQ96RM1 72 aa-0.13□□□□□ -2.43
VBP1-203ENST00000535916 SRRM2Q9UQ35 2752 aaKnown RBP-0.13□□□□□ -2.43
VBP1-203ENST00000535916 FAT1Q14517 4588 aa-0.14□□□□□ -2.43
VBP1-203ENST00000535916 H0YGX0 51 aa-0.14□□□□□ -2.43
VBP1-203ENST00000535916 A0A1B0GUL6 1792 aa-0.14□□□□□ -2.43
VBP1-203ENST00000535916 MAP1BP46821 2468 aaKnown RBP-0.14□□□□□ -2.43
VBP1-203ENST00000535916 IQGAP1P46940 1657 aa-0.14□□□□□ -2.43
VBP1-203ENST00000535916 SVEP1Q4LDE5 3571 aa-0.15□□□□□ -2.43
VBP1-203ENST00000535916 PLNP26678 52 aa-0.15□□□□□ -2.43
VBP1-203ENST00000535916 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
VBP1-203ENST00000535916 CREBBPQ92793 2442 aa-0.15□□□□□ -2.43
VBP1-203ENST00000535916 STAB2Q8WWQ8 2551 aa-0.15□□□□□ -2.43
VBP1-203ENST00000535916 HIVEP1P15822 2718 aa-0.15□□□□□ -2.43
VBP1-203ENST00000535916 HECTD1Q9ULT8 2610 aa-0.16□□□□□ -2.43
VBP1-203ENST00000535916 SONP18583 2426 aaKnown RBP-0.16□□□□□ -2.43
VBP1-203ENST00000535916 SETD2Q9BYW2 2564 aaPredicted RBP-0.16□□□□□ -2.43
VBP1-203ENST00000535916 FAM208AQ9UK61 1670 aaKnown RBP-0.16□□□□□ -2.44
VBP1-203ENST00000535916 TGP01266 2768 aa-0.16□□□□□ -2.44
VBP1-203ENST00000535916 LAMA5O15230 3695 aa-0.17□□□□□ -2.44
VBP1-203ENST00000535916 MT4P47944 62 aa-0.17□□□□□ -2.44
VBP1-203ENST00000535916 NOP10Q9NPE3 64 aaKnown RBP-0.17□□□□□ -2.44
VBP1-203ENST00000535916 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
VBP1-203ENST00000535916 LYSTQ99698 3801 aa-0.18□□□□□ -2.44
VBP1-203ENST00000535916 FLGP20930 4061 aaPredicted RBP-0.18□□□□□ -2.44
VBP1-203ENST00000535916 CMC2Q9NRP2 79 aa-0.18□□□□□ -2.44
VBP1-203ENST00000535916 CELSR3Q9NYQ7 3312 aa-0.18□□□□□ -2.44
VBP1-203ENST00000535916 RIF1Q5UIP0 2472 aaKnown RBP-0.18□□□□□ -2.44
VBP1-203ENST00000535916 PKHD1P08F94 4074 aa-0.18□□□□□ -2.44
VBP1-203ENST00000535916 NBASA2RRP1 2371 aa-0.19□□□□□ -2.44
VBP1-203ENST00000535916 DEFB110Q30KQ9 67 aa-0.2□□□□□ -2.44
VBP1-203ENST00000535916 KRTAP19-6Q3LI70 58 aa-0.2□□□□□ -2.44
VBP1-203ENST00000535916 KAAG1Q9UBP8 84 aa-0.2□□□□□ -2.44
VBP1-203ENST00000535916 MYO15AQ9UKN7 3530 aa-0.21□□□□□ -2.44
VBP1-203ENST00000535916 MUC17Q685J3 4493 aa-0.21□□□□□ -2.44
VBP1-203ENST00000535916 MMP24-AS1A0A0U1RRL7 71 aa-0.21□□□□□ -2.44
VBP1-203ENST00000535916 DNAH6Q9C0G6 4158 aa-0.21□□□□□ -2.44
VBP1-203ENST00000535916 CUBNO60494 3623 aa-0.21□□□□□ -2.44
VBP1-203ENST00000535916 DOPEY1Q5JWR5 2465 aa-0.22□□□□□ -2.44
VBP1-203ENST00000535916 DNAH9Q9NYC9 4486 aa-0.22□□□□□ -2.44
VBP1-203ENST00000535916 NBPF19A0A087WUL8 3843 aa-0.22□□□□□ -2.44
VBP1-203ENST00000535916 ZFHX4Q86UP3 3567 aa-0.22□□□□□ -2.44
VBP1-203ENST00000535916 VPS13DQ5THJ4 4388 aa-0.22□□□□□ -2.44
VBP1-203ENST00000535916 ABRACLQ9P1F3 81 aa-0.22□□□□□ -2.44
VBP1-203ENST00000535916 PKD1P98161 4303 aa-0.22□□□□□ -2.45
VBP1-203ENST00000535916 NBEAL2Q6ZNJ1 2754 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 DNAH3Q8TD57 4116 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 MXRA5Q9NR99 2828 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 NFAT5O94916 1531 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 PKHD1L1Q86WI1 4243 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 DNAH1Q9P2D7 4330 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 EPG5Q9HCE0 2579 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 COL6A5A8TX70 2615 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 SMIM27A0A1W2PRY6 76 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 LINC01546A6NGU7 62 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 M0QY20 66 aa-0.23□□□□□ -2.45
VBP1-203ENST00000535916 PLECQ15149 4684 aaKnown RBP-0.23□□□□□ -2.45
VBP1-203ENST00000535916 SRCAPQ6ZRS2 3230 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms