RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
ZKSCAN1-205ENST00000535170 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
ZKSCAN1-205ENST00000535170 CRYBG3Q68DQ2 2970 aa6.09□□□□□ -1.43
ZKSCAN1-205ENST00000535170 DCHS2Q6V1P9 2916 aa6.07□□□□□ -1.44
ZKSCAN1-205ENST00000535170 NBEAQ8NFP9 2946 aa6.06□□□□□ -1.44
ZKSCAN1-205ENST00000535170 TNRC18O15417 2968 aaPredicted RBP6.06□□□□□ -1.44
ZKSCAN1-205ENST00000535170 MKI67P46013 3256 aaKnown RBP6.05□□□□□ -1.44
ZKSCAN1-205ENST00000535170 A8MU10 97 aa6.04□□□□□ -1.44
ZKSCAN1-205ENST00000535170 TACC2O95359 2948 aa6.03□□□□□ -1.44
ZKSCAN1-205ENST00000535170 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
ZKSCAN1-205ENST00000535170 TGP01266 2768 aa6.02□□□□□ -1.45
ZKSCAN1-205ENST00000535170 DMXL2Q8TDJ6 3036 aa6.02□□□□□ -1.45
ZKSCAN1-205ENST00000535170 XP32Q5T750 250 aa6.01□□□□□ -1.45
ZKSCAN1-205ENST00000535170 COL12A1Q99715 3063 aa6.01□□□□□ -1.45
ZKSCAN1-205ENST00000535170 LAMA3Q16787 3333 aa5.99□□□□□ -1.45
ZKSCAN1-205ENST00000535170 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
ZKSCAN1-205ENST00000535170 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
ZKSCAN1-205ENST00000535170 LAMA1P25391 3075 aa5.98□□□□□ -1.45
ZKSCAN1-205ENST00000535170 USP34Q70CQ2 3546 aa5.96□□□□□ -1.46
ZKSCAN1-205ENST00000535170 MXRA5Q9NR99 2828 aa5.95□□□□□ -1.46
ZKSCAN1-205ENST00000535170 KRTAP1-4P0C5Y4 121 aa5.95□□□□□ -1.46
ZKSCAN1-205ENST00000535170 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
ZKSCAN1-205ENST00000535170 ATMQ13315 3056 aa5.93□□□□□ -1.46
ZKSCAN1-205ENST00000535170 KRTAP10-8P60410 259 aa5.92□□□□□ -1.46
ZKSCAN1-205ENST00000535170 XIRP2A4UGR9 3374 aa5.91□□□□□ -1.46
ZKSCAN1-205ENST00000535170 HRNRQ86YZ3 2850 aaPredicted RBP5.9□□□□□ -1.46
ZKSCAN1-205ENST00000535170 PDZD2O15018 2839 aa5.9□□□□□ -1.46
ZKSCAN1-205ENST00000535170 CELSR1Q9NYQ6 3014 aa5.9□□□□□ -1.47
ZKSCAN1-205ENST00000535170 P0C880 135 aa5.89□□□□□ -1.47
ZKSCAN1-205ENST00000535170 BOD1L1Q8NFC6 3051 aa5.89□□□□□ -1.47
ZKSCAN1-205ENST00000535170 FBN2P35556 2912 aa5.86□□□□□ -1.47
ZKSCAN1-205ENST00000535170 REV3LO60673 3130 aa5.85□□□□□ -1.47
ZKSCAN1-205ENST00000535170 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
ZKSCAN1-205ENST00000535170 H0YAA0 97 aa5.83□□□□□ -1.48
ZKSCAN1-205ENST00000535170 UNC80Q8N2C7 3258 aa5.79□□□□□ -1.48
ZKSCAN1-205ENST00000535170 CELSR3Q9NYQ7 3312 aa5.79□□□□□ -1.48
ZKSCAN1-205ENST00000535170 KRTAP10-10P60014 251 aa5.79□□□□□ -1.48
ZKSCAN1-205ENST00000535170 PKD1L1Q8TDX9 2849 aa5.75□□□□□ -1.49
ZKSCAN1-205ENST00000535170 FREM2Q5SZK8 3169 aa5.75□□□□□ -1.49
ZKSCAN1-205ENST00000535170 COL6A3P12111 3177 aa5.74□□□□□ -1.49
ZKSCAN1-205ENST00000535170 TENM2Q9NT68 2774 aa5.73□□□□□ -1.49
ZKSCAN1-205ENST00000535170 BRCA2P51587 3418 aa5.73□□□□□ -1.49
ZKSCAN1-205ENST00000535170 VWFP04275 2813 aa5.71□□□□□ -1.5
ZKSCAN1-205ENST00000535170 CDH23Q9H251 3354 aa5.66□□□□□ -1.5
ZKSCAN1-205ENST00000535170 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.51
ZKSCAN1-205ENST00000535170 DMXL1Q9Y485 3027 aa5.63□□□□□ -1.51
ZKSCAN1-205ENST00000535170 EYSQ5T1H1 3165 aa5.61□□□□□ -1.51
ZKSCAN1-205ENST00000535170 A0A1B0GVY2 172 aa5.61□□□□□ -1.51
ZKSCAN1-205ENST00000535170 VCANP13611 3396 aa5.59□□□□□ -1.51
ZKSCAN1-205ENST00000535170 DNAH14Q0VDD8 3507 aa5.55□□□□□ -1.52
ZKSCAN1-205ENST00000535170 COL7A1Q02388 2944 aa5.53□□□□□ -1.52
ZKSCAN1-205ENST00000535170 CFAP47Q6ZTR5 3102 aa5.5□□□□□ -1.53
ZKSCAN1-205ENST00000535170 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
ZKSCAN1-205ENST00000535170 SZT2Q5T011 3432 aa5.45□□□□□ -1.54
ZKSCAN1-205ENST00000535170 SPEGQ15772 3267 aa5.44□□□□□ -1.54
ZKSCAN1-205ENST00000535170 MEGF8Q7Z7M0 2845 aa5.43□□□□□ -1.54
ZKSCAN1-205ENST00000535170 SPTBN5Q9NRC6 3674 aaKnown RBP5.42□□□□□ -1.54
ZKSCAN1-205ENST00000535170 NBPF19A0A087WUL8 3843 aa5.42□□□□□ -1.54
ZKSCAN1-205ENST00000535170 KRTAP12-1P59990 96 aa5.41□□□□□ -1.54
ZKSCAN1-205ENST00000535170 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
ZKSCAN1-205ENST00000535170 INE1O15225 51 aa5.38□□□□□ -1.55
ZKSCAN1-205ENST00000535170 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
ZKSCAN1-205ENST00000535170 FBN3Q75N90 2809 aa5.34□□□□□ -1.56
ZKSCAN1-205ENST00000535170 FBN1P35555 2871 aaKnown RBP5.31□□□□□ -1.56
ZKSCAN1-205ENST00000535170 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
ZKSCAN1-205ENST00000535170 LOC400499M0QZD8 3231 aa5.3□□□□□ -1.56
ZKSCAN1-205ENST00000535170 ZFHX3Q15911 3703 aa5.25□□□□□ -1.57
ZKSCAN1-205ENST00000535170 MYO15AQ9UKN7 3530 aa5.2□□□□□ -1.58
ZKSCAN1-205ENST00000535170 WDFY3Q8IZQ1 3526 aa5.18□□□□□ -1.58
ZKSCAN1-205ENST00000535170 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
ZKSCAN1-205ENST00000535170 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.58
ZKSCAN1-205ENST00000535170 OTOGQ6ZRI0 2925 aa5.14□□□□□ -1.59
ZKSCAN1-205ENST00000535170 ZFHX4Q86UP3 3567 aa5.14□□□□□ -1.59
ZKSCAN1-205ENST00000535170 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
ZKSCAN1-205ENST00000535170 DCHS1Q96JQ0 3298 aa5.07□□□□□ -1.6
ZKSCAN1-205ENST00000535170 TRRAPQ9Y4A5 3859 aa5.03□□□□□ -1.6
ZKSCAN1-205ENST00000535170 MT1HL1P0DM35 61 aa5□□□□□ -1.61
ZKSCAN1-205ENST00000535170 SPENQ96T58 3664 aaKnown RBP4.97□□□□□ -1.61
ZKSCAN1-205ENST00000535170 ALMS1Q8TCU4 4167 aa4.96□□□□□ -1.61
ZKSCAN1-205ENST00000535170 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
ZKSCAN1-205ENST00000535170 ASPMQ8IZT6 3477 aa4.94□□□□□ -1.62
ZKSCAN1-205ENST00000535170 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
ZKSCAN1-205ENST00000535170 RELNP78509 3460 aa4.92□□□□□ -1.62
ZKSCAN1-205ENST00000535170 DMDP11532 3685 aa4.91□□□□□ -1.62
ZKSCAN1-205ENST00000535170 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
ZKSCAN1-205ENST00000535170 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
ZKSCAN1-205ENST00000535170 LAMA5O15230 3695 aa4.9□□□□□ -1.63
ZKSCAN1-205ENST00000535170 AKAP9Q99996 3911 aa4.84□□□□□ -1.63
ZKSCAN1-205ENST00000535170 KRTAP10-4P60372 401 aaPredicted RBP4.83□□□□□ -1.64
ZKSCAN1-205ENST00000535170 DNAH1Q9P2D7 4330 aa4.78□□□□□ -1.64
ZKSCAN1-205ENST00000535170 VPS13CQ709C8 3753 aa4.77□□□□□ -1.65
ZKSCAN1-205ENST00000535170 SMG1Q96Q15 3661 aaKnown RBP4.77□□□□□ -1.65
ZKSCAN1-205ENST00000535170 HUWE1Q7Z6Z7 4374 aaKnown RBP4.75□□□□□ -1.65
ZKSCAN1-205ENST00000535170 CSMD1Q96PZ7 3565 aa4.72□□□□□ -1.65
ZKSCAN1-205ENST00000535170 BSNQ9UPA5 3926 aa4.69□□□□□ -1.66
ZKSCAN1-205ENST00000535170 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
ZKSCAN1-205ENST00000535170 ANK3Q12955 4377 aaKnown RBP4.68□□□□□ -1.66
ZKSCAN1-205ENST00000535170 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
ZKSCAN1-205ENST00000535170 MUC3AQ02505 3323 aa4.67□□□□□ -1.66
ZKSCAN1-205ENST00000535170 CUBNO60494 3623 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms