RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 AKAP6Q13023 2319 aa1.39□□□□□ -2.19
ATPAF1-211ENST00000534216 RPL37P61927 97 aaKnown RBP1.39□□□□□ -2.19
ATPAF1-211ENST00000534216 DEFB105AQ8NG35 78 aa1.39□□□□□ -2.19
ATPAF1-211ENST00000534216 NOP10Q9NPE3 64 aaKnown RBP1.39□□□□□ -2.19
ATPAF1-211ENST00000534216 FAM208BQ5VWN6 2430 aa1.39□□□□□ -2.19
ATPAF1-211ENST00000534216 CEP250Q9BV73 2442 aa1.39□□□□□ -2.19
ATPAF1-211ENST00000534216 ZFHX4Q86UP3 3567 aa1.39□□□□□ -2.19
ATPAF1-211ENST00000534216 CFAP54Q96N23 3096 aa1.38□□□□□ -2.19
ATPAF1-211ENST00000534216 NCOR2Q9Y618 2525 aa1.38□□□□□ -2.19
ATPAF1-211ENST00000534216 SPENQ96T58 3664 aaKnown RBP1.38□□□□□ -2.19
ATPAF1-211ENST00000534216 BSNQ9UPA5 3926 aa1.38□□□□□ -2.19
ATPAF1-211ENST00000534216 K7EIL1 84 aa1.38□□□□□ -2.19
ATPAF1-211ENST00000534216 SPART-AS1P0CW21 52 aa1.38□□□□□ -2.19
ATPAF1-211ENST00000534216 HTN3P15516 51 aa1.38□□□□□ -2.19
ATPAF1-211ENST00000534216 MAP1BP46821 2468 aaKnown RBP1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 SPRR1AP35321 89 aa1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 SPTBN2O15020 2390 aa1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 ANKHD1Q8IWZ3 2542 aaKnown RBP1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 CFAP47Q6ZTR5 3102 aa1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 SPTBN4Q9H254 2564 aa1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 ZNF292O60281 2723 aa1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 DMXL1Q9Y485 3027 aa1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 ROS1P08922 2347 aa1.37□□□□□ -2.19
ATPAF1-211ENST00000534216 CEP295Q9C0D2 2601 aa1.36□□□□□ -2.19
ATPAF1-211ENST00000534216 PIEZO1Q92508 2521 aa1.36□□□□□ -2.19
ATPAF1-211ENST00000534216 DEFB135Q30KP9 77 aa1.36□□□□□ -2.19
ATPAF1-211ENST00000534216 UBE2DNLQ8IWF7 75 aa1.36□□□□□ -2.19
ATPAF1-211ENST00000534216 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
ATPAF1-211ENST00000534216 LOC400499M0QZD8 3231 aa1.36□□□□□ -2.19
ATPAF1-211ENST00000534216 FRYQ5TBA9 3013 aa1.35□□□□□ -2.19
ATPAF1-211ENST00000534216 A0A096LPF7 62 aa1.35□□□□□ -2.19
ATPAF1-211ENST00000534216 KRTAP12-1P59990 96 aa1.35□□□□□ -2.19
ATPAF1-211ENST00000534216 AKAP13Q12802 2813 aa1.35□□□□□ -2.19
ATPAF1-211ENST00000534216 DMXL2Q8TDJ6 3036 aa1.35□□□□□ -2.19
ATPAF1-211ENST00000534216 DSPP15924 2871 aaKnown RBP1.35□□□□□ -2.19
ATPAF1-211ENST00000534216 ASH1LQ9NR48 2969 aaKnown RBP1.35□□□□□ -2.19
ATPAF1-211ENST00000534216 ANKRD11Q6UB99 2663 aaPredicted RBP1.34□□□□□ -2.19
ATPAF1-211ENST00000534216 BOD1L1Q8NFC6 3051 aa1.34□□□□□ -2.19
ATPAF1-211ENST00000534216 TLN1Q9Y490 2541 aaKnown RBP1.34□□□□□ -2.19
ATPAF1-211ENST00000534216 DEFB4AO15263 64 aa1.34□□□□□ -2.19
ATPAF1-211ENST00000534216 SMG1Q96Q15 3661 aaKnown RBP1.34□□□□□ -2.2
ATPAF1-211ENST00000534216 DCHS1Q96JQ0 3298 aa1.34□□□□□ -2.2
ATPAF1-211ENST00000534216 ADGRG4Q8IZF6 3080 aa1.34□□□□□ -2.2
ATPAF1-211ENST00000534216 ACACBO00763 2458 aa1.33□□□□□ -2.2
ATPAF1-211ENST00000534216 ZNF462Q96JM2 2506 aa1.33□□□□□ -2.2
ATPAF1-211ENST00000534216 RELNP78509 3460 aa1.33□□□□□ -2.2
ATPAF1-211ENST00000534216 NAV2Q8IVL1 2488 aa1.33□□□□□ -2.2
ATPAF1-211ENST00000534216 JMJD1CQ15652 2540 aa1.33□□□□□ -2.2
ATPAF1-211ENST00000534216 ATMQ13315 3056 aa1.33□□□□□ -2.2
ATPAF1-211ENST00000534216 DOPEY1Q5JWR5 2465 aa1.32□□□□□ -2.2
ATPAF1-211ENST00000534216 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
ATPAF1-211ENST00000534216 SPRR1BP22528 89 aa1.32□□□□□ -2.2
ATPAF1-211ENST00000534216 PRLHP81277 87 aa1.32□□□□□ -2.2
ATPAF1-211ENST00000534216 TENM1Q9UKZ4 2725 aa1.32□□□□□ -2.2
ATPAF1-211ENST00000534216 CHD8Q9HCK8 2581 aa1.32□□□□□ -2.2
ATPAF1-211ENST00000534216 CHD6Q8TD26 2715 aa1.31□□□□□ -2.2
ATPAF1-211ENST00000534216 H3BNG1 76 aa1.31□□□□□ -2.2
ATPAF1-211ENST00000534216 PRRC2CQ9Y520 2896 aaKnown RBP1.31□□□□□ -2.2
ATPAF1-211ENST00000534216 UBR5O95071 2799 aaPredicted RBP1.3□□□□□ -2.2
ATPAF1-211ENST00000534216 NBASA2RRP1 2371 aa1.3□□□□□ -2.2
ATPAF1-211ENST00000534216 COL12A1Q99715 3063 aa1.3□□□□□ -2.2
ATPAF1-211ENST00000534216 S4R3F8 94 aa1.3□□□□□ -2.2
ATPAF1-211ENST00000534216 NBEAQ8NFP9 2946 aa1.3□□□□□ -2.2
ATPAF1-211ENST00000534216 SVEP1Q4LDE5 3571 aa1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 ZZEF1O43149 2961 aa1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 KALRNO60229 2985 aa1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 C2CD3Q4AC94 2353 aa1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 LINC01556Q5JQF7 62 aa1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 APLNQ9ULZ1 77 aa1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 SPTAN1Q13813 2472 aaKnown RBP1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 HELZ2Q9BYK8 2649 aaKnown RBP1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 ITPR1Q14643 2758 aa1.29□□□□□ -2.2
ATPAF1-211ENST00000534216 VPS13CQ709C8 3753 aa1.28□□□□□ -2.2
ATPAF1-211ENST00000534216 SPG11Q96JI7 2443 aa1.28□□□□□ -2.2
ATPAF1-211ENST00000534216 USP24Q9UPU5 2620 aa1.28□□□□□ -2.2
ATPAF1-211ENST00000534216 CELSR2Q9HCU4 2923 aa1.28□□□□□ -2.2
ATPAF1-211ENST00000534216 SPINK1P00995 79 aa1.28□□□□□ -2.2
ATPAF1-211ENST00000534216 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
ATPAF1-211ENST00000534216 MYO18BQ8IUG5 2567 aa1.28□□□□□ -2.2
ATPAF1-211ENST00000534216 IGSF10Q6WRI0 2623 aa1.28□□□□□ -2.2
ATPAF1-211ENST00000534216 EPG5Q9HCE0 2579 aa1.27□□□□□ -2.21
ATPAF1-211ENST00000534216 CCDC168Q8NDH2 2452 aa1.27□□□□□ -2.21
ATPAF1-211ENST00000534216 CREBBPQ92793 2442 aa1.27□□□□□ -2.21
ATPAF1-211ENST00000534216 NBPF19A0A087WUL8 3843 aa1.27□□□□□ -2.21
ATPAF1-211ENST00000534216 CSMD1Q96PZ7 3565 aa1.27□□□□□ -2.21
ATPAF1-211ENST00000534216 FBN2P35556 2912 aa1.27□□□□□ -2.21
ATPAF1-211ENST00000534216 ZFYVE26Q68DK2 2539 aa1.27□□□□□ -2.21
ATPAF1-211ENST00000534216 VWFP04275 2813 aa1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 USP9XQ93008 2570 aaPredicted RBP1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 FASNP49327 2511 aaKnown RBP1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 LRRK2Q5S007 2527 aa1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 CSMD2Q7Z408 3487 aa1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 COL6A5A8TX70 2615 aa1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 USP9YO00507 2555 aaPredicted RBP1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 PTPN13Q12923 2485 aa1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 LRBAP50851 2863 aa1.26□□□□□ -2.21
ATPAF1-211ENST00000534216 AKAP9Q99996 3911 aa1.25□□□□□ -2.21
ATPAF1-211ENST00000534216 SRRM2Q9UQ35 2752 aaKnown RBP1.25□□□□□ -2.21
ATPAF1-211ENST00000534216 CFAP46Q8IYW2 2715 aa1.25□□□□□ -2.21
ATPAF1-211ENST00000534216 POLQO75417 2590 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms