RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 SPEGQ15772 3267 aa8.91□□□□□ -0.98
PCDHA6-203ENST00000529310 NBEAQ8NFP9 2946 aa8.88□□□□□ -0.99
PCDHA6-203ENST00000529310 A8MUU9 505 aa8.88□□□□□ -0.99
PCDHA6-203ENST00000529310 Q6ZRN7 208 aaPredicted RBP8.88□□□□□ -0.99
PCDHA6-203ENST00000529310 KRTAP7-1Q8IUC3 87 aa8.87□□□□□ -0.99
PCDHA6-203ENST00000529310 ITPR1Q14643 2758 aa8.86□□□□□ -0.99
PCDHA6-203ENST00000529310 NBEAL2Q6ZNJ1 2754 aa8.86□□□□□ -0.99
PCDHA6-203ENST00000529310 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
PCDHA6-203ENST00000529310 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
PCDHA6-203ENST00000529310 LRBAP50851 2863 aa8.83□□□□□ -1
PCDHA6-203ENST00000529310 NDUFAF8A1L188 74 aa8.83□□□□□ -1
PCDHA6-203ENST00000529310 HIVEP1P15822 2718 aa8.83□□□□□ -1
PCDHA6-203ENST00000529310 TACC2O95359 2948 aa8.8□□□□□ -1
PCDHA6-203ENST00000529310 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
PCDHA6-203ENST00000529310 KALRNO60229 2985 aa8.79□□□□□ -1
PCDHA6-203ENST00000529310 ZZEF1O43149 2961 aa8.79□□□□□ -1
PCDHA6-203ENST00000529310 KRTAP13-1Q8IUC0 172 aa8.78□□□□□ -1
PCDHA6-203ENST00000529310 UTP20O75691 2785 aaKnown RBP8.78□□□□□ -1
PCDHA6-203ENST00000529310 USP34Q70CQ2 3546 aa8.75□□□□□ -1.01
PCDHA6-203ENST00000529310 LOC400499M0QZD8 3231 aa8.72□□□□□ -1.01
PCDHA6-203ENST00000529310 APCP25054 2843 aa8.69□□□□□ -1.02
PCDHA6-203ENST00000529310 TENM4Q6N022 2769 aa8.66□□□□□ -1.02
PCDHA6-203ENST00000529310 TNP1P09430 55 aa8.65□□□□□ -1.02
PCDHA6-203ENST00000529310 MYO15AQ9UKN7 3530 aa8.64□□□□□ -1.03
PCDHA6-203ENST00000529310 CFAP47Q6ZTR5 3102 aa8.6□□□□□ -1.03
PCDHA6-203ENST00000529310 ZANQ9Y493 2812 aa8.59□□□□□ -1.03
PCDHA6-203ENST00000529310 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
PCDHA6-203ENST00000529310 HRNRQ86YZ3 2850 aaPredicted RBP8.56□□□□□ -1.04
PCDHA6-203ENST00000529310 NIPBLQ6KC79 2804 aaeCLIP8.49□□□□□ -1.05
PCDHA6-203ENST00000529310 PP632Q6XCG6 107 aa8.46□□□□□ -1.06
PCDHA6-203ENST00000529310 CRYBG3Q68DQ2 2970 aa8.43□□□□□ -1.06
PCDHA6-203ENST00000529310 CELSR2Q9HCU4 2923 aa8.43□□□□□ -1.06
PCDHA6-203ENST00000529310 MUC3AQ02505 3323 aa8.39□□□□□ -1.07
PCDHA6-203ENST00000529310 ASH1LQ9NR48 2969 aaKnown RBP8.36□□□□□ -1.07
PCDHA6-203ENST00000529310 H0YAA0 97 aa8.36□□□□□ -1.07
PCDHA6-203ENST00000529310 NF1P21359 2839 aa8.34□□□□□ -1.07
PCDHA6-203ENST00000529310 RELNP78509 3460 aa8.32□□□□□ -1.08
PCDHA6-203ENST00000529310 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
PCDHA6-203ENST00000529310 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
PCDHA6-203ENST00000529310 P0C880 135 aa8.31□□□□□ -1.08
PCDHA6-203ENST00000529310 XP32Q5T750 250 aa8.31□□□□□ -1.08
PCDHA6-203ENST00000529310 KRTAP1-4P0C5Y4 121 aa8.3□□□□□ -1.08
PCDHA6-203ENST00000529310 FBN2P35556 2912 aa8.3□□□□□ -1.08
PCDHA6-203ENST00000529310 DMDP11532 3685 aa8.27□□□□□ -1.09
PCDHA6-203ENST00000529310 LAMA5O15230 3695 aa8.26□□□□□ -1.09
PCDHA6-203ENST00000529310 WDFY3Q8IZQ1 3526 aa8.24□□□□□ -1.09
PCDHA6-203ENST00000529310 DCHS1Q96JQ0 3298 aa8.22□□□□□ -1.09
PCDHA6-203ENST00000529310 MXRA5Q9NR99 2828 aa8.21□□□□□ -1.1
PCDHA6-203ENST00000529310 A0A1B0GVY2 172 aa8.2□□□□□ -1.1
PCDHA6-203ENST00000529310 ASPMQ8IZT6 3477 aa8.17□□□□□ -1.1
PCDHA6-203ENST00000529310 TENM3Q9P273 2699 aa8.11□□□□□ -1.11
PCDHA6-203ENST00000529310 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
PCDHA6-203ENST00000529310 ZFHX4Q86UP3 3567 aa8.07□□□□□ -1.12
PCDHA6-203ENST00000529310 TENM1Q9UKZ4 2725 aa8.05□□□□□ -1.12
PCDHA6-203ENST00000529310 PDZD2O15018 2839 aa8.05□□□□□ -1.12
PCDHA6-203ENST00000529310 TENM2Q9NT68 2774 aa8.04□□□□□ -1.12
PCDHA6-203ENST00000529310 KRTAP10-10P60014 251 aa8.02□□□□□ -1.12
PCDHA6-203ENST00000529310 PRO2289Q9P1D8 64 aa7.98□□□□□ -1.13
PCDHA6-203ENST00000529310 KRTAP13-3Q3SY46 172 aa7.98□□□□□ -1.13
PCDHA6-203ENST00000529310 CELSR1Q9NYQ6 3014 aa7.92□□□□□ -1.14
PCDHA6-203ENST00000529310 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
PCDHA6-203ENST00000529310 SMG1Q96Q15 3661 aaKnown RBP7.85□□□□□ -1.15
PCDHA6-203ENST00000529310 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
PCDHA6-203ENST00000529310 NBPF19A0A087WUL8 3843 aa7.82□□□□□ -1.16
PCDHA6-203ENST00000529310 TGP01266 2768 aa7.82□□□□□ -1.16
PCDHA6-203ENST00000529310 PKD1L1Q8TDX9 2849 aa7.78□□□□□ -1.16
PCDHA6-203ENST00000529310 VWFP04275 2813 aa7.73□□□□□ -1.17
PCDHA6-203ENST00000529310 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
PCDHA6-203ENST00000529310 CSMD1Q96PZ7 3565 aa7.73□□□□□ -1.17
PCDHA6-203ENST00000529310 FBN1P35555 2871 aaKnown RBP7.71□□□□□ -1.18
PCDHA6-203ENST00000529310 KRTAP12-1P59990 96 aa7.68□□□□□ -1.18
PCDHA6-203ENST00000529310 SPENQ96T58 3664 aaKnown RBP7.68□□□□□ -1.18
PCDHA6-203ENST00000529310 ZFHX3Q15911 3703 aa7.66□□□□□ -1.18
PCDHA6-203ENST00000529310 BSNQ9UPA5 3926 aa7.64□□□□□ -1.19
PCDHA6-203ENST00000529310 SVEP1Q4LDE5 3571 aa7.63□□□□□ -1.19
PCDHA6-203ENST00000529310 CSMD2Q7Z408 3487 aa7.6□□□□□ -1.19
PCDHA6-203ENST00000529310 ANK3Q12955 4377 aaKnown RBP7.57□□□□□ -1.2
PCDHA6-203ENST00000529310 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
PCDHA6-203ENST00000529310 SRRM2Q9UQ35 2752 aaKnown RBP7.44□□□□□ -1.22
PCDHA6-203ENST00000529310 KRTAP15-1Q3LI76 137 aa7.44□□□□□ -1.22
PCDHA6-203ENST00000529310 KRTAP10-6P60371 365 aaPredicted RBP7.39□□□□□ -1.23
PCDHA6-203ENST00000529310 TRRAPQ9Y4A5 3859 aa7.37□□□□□ -1.23
PCDHA6-203ENST00000529310 CUBNO60494 3623 aa7.36□□□□□ -1.23
PCDHA6-203ENST00000529310 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
PCDHA6-203ENST00000529310 INE1O15225 51 aa7.19□□□□□ -1.26
PCDHA6-203ENST00000529310 FBN3Q75N90 2809 aa7.17□□□□□ -1.26
PCDHA6-203ENST00000529310 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
PCDHA6-203ENST00000529310 VPS13CQ709C8 3753 aa7.1□□□□□ -1.27
PCDHA6-203ENST00000529310 MEGF8Q7Z7M0 2845 aa7.09□□□□□ -1.27
PCDHA6-203ENST00000529310 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
PCDHA6-203ENST00000529310 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
PCDHA6-203ENST00000529310 ZNF469Q96JG9 3925 aaPredicted RBP7.07□□□□□ -1.28
PCDHA6-203ENST00000529310 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
PCDHA6-203ENST00000529310 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
PCDHA6-203ENST00000529310 ALMS1Q8TCU4 4167 aa7□□□□□ -1.29
PCDHA6-203ENST00000529310 HUWE1Q7Z6Z7 4374 aaKnown RBP6.99□□□□□ -1.29
PCDHA6-203ENST00000529310 AKAP9Q99996 3911 aa6.98□□□□□ -1.29
PCDHA6-203ENST00000529310 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
PCDHA6-203ENST00000529310 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
PCDHA6-203ENST00000529310 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms