RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 C1orf195Q5TG92 126 aa10.57□□□□□ -0.72
IKBKB-228ENST00000523517 FRAS1Q86XX4 4008 aa10.56□□□□□ -0.72
IKBKB-228ENST00000523517 LIMD2Q9BT23 127 aa10.55□□□□□ -0.72
IKBKB-228ENST00000523517 Q5VV11 94 aa10.54□□□□□ -0.72
IKBKB-228ENST00000523517 KMT2AQ03164 3969 aa10.54□□□□□ -0.72
IKBKB-228ENST00000523517 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
IKBKB-228ENST00000523517 CIRBP-AS1Q8TBR5 109 aa10.51□□□□□ -0.73
IKBKB-228ENST00000523517 PRR15LQ9BU68 103 aa10.48□□□□□ -0.73
IKBKB-228ENST00000523517 SSBP3-AS1Q7Z2R9 100 aa10.46□□□□□ -0.73
IKBKB-228ENST00000523517 LY6G6CO95867 125 aa10.46□□□□□ -0.74
IKBKB-228ENST00000523517 CHKB-CPT1BH3BT56 60 aa10.45□□□□□ -0.74
IKBKB-228ENST00000523517 FBN3Q75N90 2809 aa10.45□□□□□ -0.74
IKBKB-228ENST00000523517 LOC101927531A0A1B0GV80 90 aa10.44□□□□□ -0.74
IKBKB-228ENST00000523517 Q5W150 140 aa10.44□□□□□ -0.74
IKBKB-228ENST00000523517 KRTAP13-3Q3SY46 172 aa10.43□□□□□ -0.74
IKBKB-228ENST00000523517 HRES1P13985 223 aa10.41□□□□□ -0.74
IKBKB-228ENST00000523517 MEGF8Q7Z7M0 2845 aa10.41□□□□□ -0.74
IKBKB-228ENST00000523517 KRTAP10-2P60368 255 aa10.4□□□□□ -0.74
IKBKB-228ENST00000523517 C8orf87E5RJ46 101 aa10.4□□□□□ -0.74
IKBKB-228ENST00000523517 Q75L30 129 aa10.4□□□□□ -0.74
IKBKB-228ENST00000523517 ALMS1Q8TCU4 4167 aa10.39□□□□□ -0.75
IKBKB-228ENST00000523517 A8MU10 97 aa10.38□□□□□ -0.75
IKBKB-228ENST00000523517 SPAG11AQ6PDA7 123 aa10.37□□□□□ -0.75
IKBKB-228ENST00000523517 DNAH11Q96DT5 4516 aa10.36□□□□□ -0.75
IKBKB-228ENST00000523517 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
IKBKB-228ENST00000523517 TGP01266 2768 aa10.36□□□□□ -0.75
IKBKB-228ENST00000523517 DNAH6Q9C0G6 4158 aa10.32□□□□□ -0.76
IKBKB-228ENST00000523517 KRTAP13-2Q52LG2 175 aa10.32□□□□□ -0.76
IKBKB-228ENST00000523517 LINC00313P59037 77 aa10.32□□□□□ -0.76
IKBKB-228ENST00000523517 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
IKBKB-228ENST00000523517 A6NED7 52 aa10.31□□□□□ -0.76
IKBKB-228ENST00000523517 Q6ZSA8 131 aa10.29□□□□□ -0.76
IKBKB-228ENST00000523517 KRTAP10-1P60331 282 aa10.29□□□□□ -0.76
IKBKB-228ENST00000523517 LCA10Q71F78 164 aa10.29□□□□□ -0.76
IKBKB-228ENST00000523517 FAM229AH3BQW9 127 aa10.26□□□□□ -0.77
IKBKB-228ENST00000523517 PMAIP1Q13794 54 aa10.26□□□□□ -0.77
IKBKB-228ENST00000523517 ACYP2P14621 99 aa10.24□□□□□ -0.77
IKBKB-228ENST00000523517 PRR26Q8N8Z3 221 aa10.24□□□□□ -0.77
IKBKB-228ENST00000523517 DNHD1Q96M86 4753 aa10.23□□□□□ -0.77
IKBKB-228ENST00000523517 RETNLBQ9BQ08 111 aa10.22□□□□□ -0.77
IKBKB-228ENST00000523517 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.78
IKBKB-228ENST00000523517 LRP1BQ9NZR2 4599 aa10.21□□□□□ -0.78
IKBKB-228ENST00000523517 ATP11AUNQ6ZP68 121 aa10.2□□□□□ -0.78
IKBKB-228ENST00000523517 DMAC1Q96GE9 116 aa10.2□□□□□ -0.78
IKBKB-228ENST00000523517 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
IKBKB-228ENST00000523517 KRTAP16-1A8MUX0 517 aa10.19□□□□□ -0.78
IKBKB-228ENST00000523517 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
IKBKB-228ENST00000523517 IGKV2-30P06310 120 aa10.18□□□□□ -0.78
IKBKB-228ENST00000523517 SPINK7P58062 85 aa10.16□□□□□ -0.78
IKBKB-228ENST00000523517 PKD1P98161 4303 aa10.14□□□□□ -0.79
IKBKB-228ENST00000523517 FAT2Q9NYQ8 4349 aa10.13□□□□□ -0.79
IKBKB-228ENST00000523517 PLA2G1BP04054 148 aaKnown RBP10.09□□□□□ -0.79
IKBKB-228ENST00000523517 C4orf48Q5BLP8 95 aa10.09□□□□□ -0.79
IKBKB-228ENST00000523517 TYMSOSQ8TAI1 123 aa10.08□□□□□ -0.8
IKBKB-228ENST00000523517 A6NN06 94 aa10.05□□□□□ -0.8
IKBKB-228ENST00000523517 SPINK1P00995 79 aa10.04□□□□□ -0.8
IKBKB-228ENST00000523517 HYDINQ4G0P3 5121 aa10.04□□□□□ -0.8
IKBKB-228ENST00000523517 IGKV2D-30A0A075B6S6 120 aa10.04□□□□□ -0.8
IKBKB-228ENST00000523517 VPS13BQ7Z7G8 4022 aa10.04□□□□□ -0.8
IKBKB-228ENST00000523517 KTN1-AS1Q86SY8 53 aa10.02□□□□□ -0.81
IKBKB-228ENST00000523517 SEC61GP60059 68 aa9.99□□□□□ -0.81
IKBKB-228ENST00000523517 A0A1B0GU69 56 aa9.97□□□□□ -0.81
IKBKB-228ENST00000523517 C7orf65Q6ZTY9 151 aa9.95□□□□□ -0.82
IKBKB-228ENST00000523517 LINC00304Q8N9R0 145 aa9.93□□□□□ -0.82
IKBKB-228ENST00000523517 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
IKBKB-228ENST00000523517 SPATA8Q6RVD6 105 aa9.83□□□□□ -0.84
IKBKB-228ENST00000523517 SACSQ9NZJ4 4579 aa9.83□□□□□ -0.84
IKBKB-228ENST00000523517 SMR3BP02814 79 aaPredicted RBP9.81□□□□□ -0.84
IKBKB-228ENST00000523517 PKHD1P08F94 4074 aa9.81□□□□□ -0.84
IKBKB-228ENST00000523517 Q8N1X5 172 aa9.8□□□□□ -0.84
IKBKB-228ENST00000523517 UQCR11O14957 56 aa9.79□□□□□ -0.84
IKBKB-228ENST00000523517 MIR22HGQ0VDD5 57 aa9.78□□□□□ -0.84
IKBKB-228ENST00000523517 RBM12B-AS1Q9P1G2 102 aa9.77□□□□□ -0.85
IKBKB-228ENST00000523517 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
IKBKB-228ENST00000523517 A8MUU9 505 aa9.73□□□□□ -0.85
IKBKB-228ENST00000523517 C20orf166-AS1Q96NR2 134 aa9.73□□□□□ -0.85
IKBKB-228ENST00000523517 DYNC1H1Q14204 4646 aaKnown RBP9.72□□□□□ -0.85
IKBKB-228ENST00000523517 KRTAP10-4P60372 401 aaPredicted RBP9.7□□□□□ -0.86
IKBKB-228ENST00000523517 KRTAP21-3Q3LHN1 58 aa9.69□□□□□ -0.86
IKBKB-228ENST00000523517 PKHD1L1Q86WI1 4243 aa9.69□□□□□ -0.86
IKBKB-228ENST00000523517 A0A1B0GVY2 172 aa9.68□□□□□ -0.86
IKBKB-228ENST00000523517 FAT1Q14517 4588 aa9.63□□□□□ -0.87
IKBKB-228ENST00000523517 APOBP04114 4563 aaKnown RBP9.61□□□□□ -0.87
IKBKB-228ENST00000523517 KRTAP3-1Q9BYR8 98 aa9.6□□□□□ -0.87
IKBKB-228ENST00000523517 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
IKBKB-228ENST00000523517 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
IKBKB-228ENST00000523517 H0YAA0 97 aa9.46□□□□□ -0.9
IKBKB-228ENST00000523517 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
IKBKB-228ENST00000523517 A0A1B0GU33 70 aa9.43□□□□□ -0.9
IKBKB-228ENST00000523517 RYR2Q92736 4967 aa9.4□□□□□ -0.91
IKBKB-228ENST00000523517 H1FX-AS1Q4G0G2 97 aa9.39□□□□□ -0.91
IKBKB-228ENST00000523517 FLG2Q5D862 2391 aaPredicted RBP9.37□□□□□ -0.91
IKBKB-228ENST00000523517 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
IKBKB-228ENST00000523517 FAT3Q8TDW7 4589 aa9.32□□□□□ -0.92
IKBKB-228ENST00000523517 CSAG1Q6PB30 78 aa9.3□□□□□ -0.92
IKBKB-228ENST00000523517 TNXBP22105 4242 aa9.3□□□□□ -0.92
IKBKB-228ENST00000523517 LINC01554Q52M75 96 aa9.28□□□□□ -0.92
IKBKB-228ENST00000523517 RPL37P61927 97 aaKnown RBP9.27□□□□□ -0.93
IKBKB-228ENST00000523517 Q5VSD8 79 aa9.24□□□□□ -0.93
IKBKB-228ENST00000523517 LRP1Q07954 4544 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms