RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 CHKB-CPT1BH3BT56 60 aa9.84□□□□□ -0.83
PCDHGA11-202ENST00000518882 DNAH17Q9UFH2 4485 aa9.83□□□□□ -0.84
PCDHGA11-202ENST00000518882 ZNF861PO60384 105 aa9.83□□□□□ -0.84
PCDHGA11-202ENST00000518882 MRPL34Q9BQ48 92 aaKnown RBP9.83□□□□□ -0.84
PCDHGA11-202ENST00000518882 CDK2AP2O75956 126 aa9.81□□□□□ -0.84
PCDHGA11-202ENST00000518882 PLAC8Q9NZF1 115 aa9.81□□□□□ -0.84
PCDHGA11-202ENST00000518882 MEGF8Q7Z7M0 2845 aa9.79□□□□□ -0.84
PCDHGA11-202ENST00000518882 TGP01266 2768 aa9.78□□□□□ -0.84
PCDHGA11-202ENST00000518882 LOC101927531A0A1B0GV80 90 aa9.78□□□□□ -0.84
PCDHGA11-202ENST00000518882 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
PCDHGA11-202ENST00000518882 Q75L30 129 aa9.76□□□□□ -0.85
PCDHGA11-202ENST00000518882 HRES1P13985 223 aa9.75□□□□□ -0.85
PCDHGA11-202ENST00000518882 PMAIP1Q13794 54 aa9.75□□□□□ -0.85
PCDHGA11-202ENST00000518882 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
PCDHGA11-202ENST00000518882 ALMS1Q8TCU4 4167 aa9.74□□□□□ -0.85
PCDHGA11-202ENST00000518882 Q5W150 140 aa9.73□□□□□ -0.85
PCDHGA11-202ENST00000518882 LCA10Q71F78 164 aa9.73□□□□□ -0.85
PCDHGA11-202ENST00000518882 DNAH6Q9C0G6 4158 aa9.72□□□□□ -0.85
PCDHGA11-202ENST00000518882 KRTAP13-3Q3SY46 172 aa9.71□□□□□ -0.86
PCDHGA11-202ENST00000518882 A6NED7 52 aa9.7□□□□□ -0.86
PCDHGA11-202ENST00000518882 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
PCDHGA11-202ENST00000518882 CIRBP-AS1Q8TBR5 109 aa9.7□□□□□ -0.86
PCDHGA11-202ENST00000518882 LINC01558Q9Y6Z2 57 aa9.7□□□□□ -0.86
PCDHGA11-202ENST00000518882 SPTSSBQ8NFR3 76 aa9.65□□□□□ -0.87
PCDHGA11-202ENST00000518882 DNAH11Q96DT5 4516 aa9.64□□□□□ -0.87
PCDHGA11-202ENST00000518882 C1orf134Q5TEV5 83 aa9.62□□□□□ -0.87
PCDHGA11-202ENST00000518882 PRR26Q8N8Z3 221 aa9.61□□□□□ -0.87
PCDHGA11-202ENST00000518882 DNAH5Q8TE73 4624 aa9.6□□□□□ -0.87
PCDHGA11-202ENST00000518882 CDC42SE1Q9NRR8 79 aa9.6□□□□□ -0.87
PCDHGA11-202ENST00000518882 ATP11AUNQ6ZP68 121 aa9.59□□□□□ -0.87
PCDHGA11-202ENST00000518882 SPINK7P58062 85 aa9.59□□□□□ -0.87
PCDHGA11-202ENST00000518882 SEC61GP60059 68 aa9.59□□□□□ -0.87
PCDHGA11-202ENST00000518882 SSBP3-AS1Q7Z2R9 100 aa9.58□□□□□ -0.88
PCDHGA11-202ENST00000518882 C8orf87E5RJ46 101 aa9.56□□□□□ -0.88
PCDHGA11-202ENST00000518882 KRTAP10-2P60368 255 aa9.54□□□□□ -0.88
PCDHGA11-202ENST00000518882 RETNLBQ9BQ08 111 aa9.53□□□□□ -0.88
PCDHGA11-202ENST00000518882 LINC00313P59037 77 aa9.53□□□□□ -0.88
PCDHGA11-202ENST00000518882 KRTAP13-2Q52LG2 175 aa9.53□□□□□ -0.88
PCDHGA11-202ENST00000518882 A6NN06 94 aa9.52□□□□□ -0.89
PCDHGA11-202ENST00000518882 LY6G6CO95867 125 aa9.51□□□□□ -0.89
PCDHGA11-202ENST00000518882 ACYP2P14621 99 aa9.51□□□□□ -0.89
PCDHGA11-202ENST00000518882 KTN1-AS1Q86SY8 53 aa9.5□□□□□ -0.89
PCDHGA11-202ENST00000518882 LRP1BQ9NZR2 4599 aa9.49□□□□□ -0.89
PCDHGA11-202ENST00000518882 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
PCDHGA11-202ENST00000518882 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
PCDHGA11-202ENST00000518882 PKD1P98161 4303 aa9.47□□□□□ -0.89
PCDHGA11-202ENST00000518882 KRTAP16-1A8MUX0 517 aa9.44□□□□□ -0.9
PCDHGA11-202ENST00000518882 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
PCDHGA11-202ENST00000518882 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
PCDHGA11-202ENST00000518882 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.9
PCDHGA11-202ENST00000518882 Q6ZSA8 131 aa9.39□□□□□ -0.91
PCDHGA11-202ENST00000518882 FAT2Q9NYQ8 4349 aa9.39□□□□□ -0.91
PCDHGA11-202ENST00000518882 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
PCDHGA11-202ENST00000518882 DNHD1Q96M86 4753 aa9.39□□□□□ -0.91
PCDHGA11-202ENST00000518882 HYDINQ4G0P3 5121 aa9.36□□□□□ -0.91
PCDHGA11-202ENST00000518882 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
PCDHGA11-202ENST00000518882 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
PCDHGA11-202ENST00000518882 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
PCDHGA11-202ENST00000518882 A0A1B0GU69 56 aa9.31□□□□□ -0.92
PCDHGA11-202ENST00000518882 PLA2G1BP04054 148 aaKnown RBP9.25□□□□□ -0.93
PCDHGA11-202ENST00000518882 TYMSOSQ8TAI1 123 aa9.23□□□□□ -0.93
PCDHGA11-202ENST00000518882 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
PCDHGA11-202ENST00000518882 SPATA8Q6RVD6 105 aa9.21□□□□□ -0.93
PCDHGA11-202ENST00000518882 PKHD1P08F94 4074 aa9.2□□□□□ -0.94
PCDHGA11-202ENST00000518882 SPINK1P00995 79 aa9.19□□□□□ -0.94
PCDHGA11-202ENST00000518882 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
PCDHGA11-202ENST00000518882 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
PCDHGA11-202ENST00000518882 UQCR11O14957 56 aa9.15□□□□□ -0.94
PCDHGA11-202ENST00000518882 Q8N1X5 172 aa9.14□□□□□ -0.95
PCDHGA11-202ENST00000518882 ADM2Q7Z4H4 148 aa9.13□□□□□ -0.95
PCDHGA11-202ENST00000518882 PRAC1Q96KF2 57 aa9.13□□□□□ -0.95
PCDHGA11-202ENST00000518882 LINC00304Q8N9R0 145 aa9.09□□□□□ -0.95
PCDHGA11-202ENST00000518882 SACSQ9NZJ4 4579 aa9.05□□□□□ -0.96
PCDHGA11-202ENST00000518882 RPS29P62273 56 aaKnown RBP9.03□□□□□ -0.96
PCDHGA11-202ENST00000518882 C9orf92A6NGG3 77 aa9.01□□□□□ -0.97
PCDHGA11-202ENST00000518882 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
PCDHGA11-202ENST00000518882 PKHD1L1Q86WI1 4243 aa8.98□□□□□ -0.97
PCDHGA11-202ENST00000518882 FAT1Q14517 4588 aa8.95□□□□□ -0.98
PCDHGA11-202ENST00000518882 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
PCDHGA11-202ENST00000518882 A8MUU9 505 aa8.94□□□□□ -0.98
PCDHGA11-202ENST00000518882 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
PCDHGA11-202ENST00000518882 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
PCDHGA11-202ENST00000518882 APOBP04114 4563 aaKnown RBP8.91□□□□□ -0.98
PCDHGA11-202ENST00000518882 H0YAA0 97 aa8.88□□□□□ -0.99
PCDHGA11-202ENST00000518882 KRTAP10-4P60372 401 aaPredicted RBP8.87□□□□□ -0.99
PCDHGA11-202ENST00000518882 CSAG1Q6PB30 78 aa8.83□□□□□ -1
PCDHGA11-202ENST00000518882 LINC01554Q52M75 96 aa8.82□□□□□ -1
PCDHGA11-202ENST00000518882 A0A1B0GU33 70 aa8.78□□□□□ -1
PCDHGA11-202ENST00000518882 A0A1B0GVY2 172 aa8.78□□□□□ -1
PCDHGA11-202ENST00000518882 FLG2Q5D862 2391 aaPredicted RBP8.77□□□□□ -1.01
PCDHGA11-202ENST00000518882 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
PCDHGA11-202ENST00000518882 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
PCDHGA11-202ENST00000518882 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.02
PCDHGA11-202ENST00000518882 LRP1Q07954 4544 aaKnown RBP8.65□□□□□ -1.02
PCDHGA11-202ENST00000518882 TNXBP22105 4242 aa8.63□□□□□ -1.03
PCDHGA11-202ENST00000518882 HSPG2P98160 4391 aa8.63□□□□□ -1.03
PCDHGA11-202ENST00000518882 RYR2Q92736 4967 aa8.59□□□□□ -1.03
PCDHGA11-202ENST00000518882 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
PCDHGA11-202ENST00000518882 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
PCDHGA11-202ENST00000518882 DMBT1Q9UGM3 2413 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms