RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 LYSTQ99698 3801 aa1.57□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 APCP25054 2843 aa1.56□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 TMEM167AQ8TBQ9 72 aa1.55□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 PTPN13Q12923 2485 aa1.55□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 FBN3Q75N90 2809 aa1.54□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 CHD7Q9P2D1 2997 aa1.54□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 SETD2Q9BYW2 2564 aaPredicted RBP1.53□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 CCDC168Q8NDH2 2452 aa1.51□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 ACACAQ13085 2346 aa1.51□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 UNC79Q9P2D8 2635 aa1.5□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 NOTCH1P46531 2555 aa1.5□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 ZFYVE26Q68DK2 2539 aa1.49□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 DMBT1Q9UGM3 2413 aaPredicted RBP1.49□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 PDZD2O15018 2839 aa1.48□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 ACANP16112 2415 aa1.48□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 TENM2Q9NT68 2774 aa1.47□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 DEFB110Q30KQ9 67 aa1.47□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 KMT2AQ03164 3969 aa1.47□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 PKD1L1Q8TDX9 2849 aa1.47□□□□□ -2.17
RNU6ATAC39P-201ENST00000516309 DNAH11Q96DT5 4516 aa1.46□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 GCN1Q92616 2671 aaKnown RBP1.46□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 SPART-AS1P0CW21 52 aa1.45□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 SACSQ9NZJ4 4579 aa1.45□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 HUWE1Q7Z6Z7 4374 aaKnown RBP1.45□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 APC2O95996 2303 aa1.43□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 NF1P21359 2839 aa1.43□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 USP24Q9UPU5 2620 aa1.41□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 SPTBN4Q9H254 2564 aa1.41□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 MTORP42345 2549 aa1.4□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 FLNCQ14315 2725 aa1.4□□□□□ -2.18
RNU6ATAC39P-201ENST00000516309 SETXQ7Z333 2677 aaKnown RBP1.4□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 VPS13DQ5THJ4 4388 aa1.38□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 RPL39P5Q59GN2 51 aa1.38□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 ZZEF1O43149 2961 aa1.37□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 RIF1Q5UIP0 2472 aaKnown RBP1.37□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 DNAH3Q8TD57 4116 aa1.36□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 SPRR2DP22532 72 aa1.36□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 EPG5Q9HCE0 2579 aa1.35□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 STAB1Q9NY15 2570 aa1.34□□□□□ -2.19
RNU6ATAC39P-201ENST00000516309 FAM186AA6NE01 2351 aa1.34□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 LRRK2Q5S007 2527 aa1.33□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 MYCBP2O75592 4640 aa1.33□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 CRYBG3Q68DQ2 2970 aa1.32□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 SPRR2BP35325 72 aa1.31□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 NSD1Q96L73 2696 aaPredicted RBP1.31□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 SPENQ96T58 3664 aaKnown RBP1.3□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 USP9YO00507 2555 aaPredicted RBP1.3□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 FRYQ5TBA9 3013 aa1.29□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 FLNBO75369 2602 aaKnown RBP1.28□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 TACC2O95359 2948 aa1.28□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 H3BUX3 64 aa1.28□□□□□ -2.2
RNU6ATAC39P-201ENST00000516309 PKD1P98161 4303 aa1.28□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 DEFB108AA8MXU0 73 aa1.27□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 RHPN1-AS1Q9BWJ2 59 aa1.27□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 ANKHD1Q8IWZ3 2542 aaKnown RBP1.26□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 KRTAP8-1Q8IUC2 63 aa1.26□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 CUBNO60494 3623 aa1.26□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 DMXL1Q9Y485 3027 aa1.26□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 NBPF19A0A087WUL8 3843 aa1.25□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 COL12A1Q99715 3063 aa1.25□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 ACACBO00763 2458 aa1.25□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 DYNC2H1Q8NCM8 4307 aaKnown RBP1.24□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 ANKRD11Q6UB99 2663 aaPredicted RBP1.24□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 PKHD1L1Q86WI1 4243 aa1.24□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 HECTD4Q9Y4D8 3996 aa1.23□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 ITPR3Q14573 2671 aa1.23□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 NCOR2Q9Y618 2525 aa1.23□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 ANK3Q12955 4377 aaKnown RBP1.23□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 DCHS2Q6V1P9 2916 aa1.23□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 ZFHX4Q86UP3 3567 aa1.22□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 DNAH2Q9P225 4427 aa1.22□□□□□ -2.21
RNU6ATAC39P-201ENST00000516309 SONP18583 2426 aaKnown RBP1.21□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 RANBP2P49792 3224 aaKnown RBP1.21□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 DNAH7Q8WXX0 4024 aa1.21□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 SPG11Q96JI7 2443 aa1.2□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 LPAP08519 4548 aa1.2□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 MGAQ8IWI9 3026 aa1.2□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 UTP20O75691 2785 aaKnown RBP1.19□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 NBEAL2Q6ZNJ1 2754 aa1.19□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 CACNA1AO00555 2505 aa1.18□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 LRP1Q07954 4544 aaKnown RBP1.18□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 SPRR2AP35326 72 aa1.17□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 CELSR3Q9NYQ7 3312 aa1.17□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 HSPG2P98160 4391 aa1.16□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 COL7A1Q02388 2944 aa1.16□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 FLGP20930 4061 aaPredicted RBP1.15□□□□□ -2.22
RNU6ATAC39P-201ENST00000516309 MT1AP04731 61 aa1.15□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 HRNRQ86YZ3 2850 aaPredicted RBP1.14□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 HIVEP1P15822 2718 aa1.14□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 TLN2Q9Y4G6 2542 aa1.14□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 DNAH8Q96JB1 4490 aa1.14□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 DNAH6Q9C0G6 4158 aa1.14□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 LAMA5O15230 3695 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms