RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 FLNCQ14315 2725 aa5.88□□□□□ -1.47
TRIM41-209ENST00000515834 ASH1LQ9NR48 2969 aaKnown RBP5.87□□□□□ -1.47
TRIM41-209ENST00000515834 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
TRIM41-209ENST00000515834 A6NN06 94 aa5.85□□□□□ -1.47
TRIM41-209ENST00000515834 LAMA1P25391 3075 aa5.84□□□□□ -1.47
TRIM41-209ENST00000515834 HTTP42858 3142 aa5.84□□□□□ -1.47
TRIM41-209ENST00000515834 VCANP13611 3396 aa5.84□□□□□ -1.47
TRIM41-209ENST00000515834 APCP25054 2843 aa5.82□□□□□ -1.48
TRIM41-209ENST00000515834 TENM4Q6N022 2769 aa5.81□□□□□ -1.48
TRIM41-209ENST00000515834 KALRNO60229 2985 aa5.81□□□□□ -1.48
TRIM41-209ENST00000515834 TPRXLQ17RH7 258 aa5.81□□□□□ -1.48
TRIM41-209ENST00000515834 HIVEP1P15822 2718 aa5.81□□□□□ -1.48
TRIM41-209ENST00000515834 ITPR1Q14643 2758 aa5.8□□□□□ -1.48
TRIM41-209ENST00000515834 CFAP47Q6ZTR5 3102 aa5.8□□□□□ -1.48
TRIM41-209ENST00000515834 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
TRIM41-209ENST00000515834 UTP20O75691 2785 aaKnown RBP5.79□□□□□ -1.48
TRIM41-209ENST00000515834 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
TRIM41-209ENST00000515834 BOD1L1Q8NFC6 3051 aa5.74□□□□□ -1.49
TRIM41-209ENST00000515834 CDH23Q9H251 3354 aa5.73□□□□□ -1.49
TRIM41-209ENST00000515834 COL12A1Q99715 3063 aa5.72□□□□□ -1.49
TRIM41-209ENST00000515834 P0C880 135 aa5.71□□□□□ -1.49
TRIM41-209ENST00000515834 FRYLO94915 3013 aa5.71□□□□□ -1.5
TRIM41-209ENST00000515834 COL6A3P12111 3177 aa5.68□□□□□ -1.5
TRIM41-209ENST00000515834 ATMQ13315 3056 aa5.68□□□□□ -1.5
TRIM41-209ENST00000515834 CELSR2Q9HCU4 2923 aa5.67□□□□□ -1.5
TRIM41-209ENST00000515834 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
TRIM41-209ENST00000515834 SPEGQ15772 3267 aa5.66□□□□□ -1.5
TRIM41-209ENST00000515834 LRBAP50851 2863 aa5.63□□□□□ -1.51
TRIM41-209ENST00000515834 H0YAA0 97 aa5.63□□□□□ -1.51
TRIM41-209ENST00000515834 SZT2Q5T011 3432 aa5.62□□□□□ -1.51
TRIM41-209ENST00000515834 TENM1Q9UKZ4 2725 aa5.62□□□□□ -1.51
TRIM41-209ENST00000515834 DNAH14Q0VDD8 3507 aa5.61□□□□□ -1.51
TRIM41-209ENST00000515834 TENM3Q9P273 2699 aa5.59□□□□□ -1.51
TRIM41-209ENST00000515834 NF1P21359 2839 aa5.55□□□□□ -1.52
TRIM41-209ENST00000515834 DCHS2Q6V1P9 2916 aa5.55□□□□□ -1.52
TRIM41-209ENST00000515834 ADGRG4Q8IZF6 3080 aa5.55□□□□□ -1.52
TRIM41-209ENST00000515834 ZZEF1O43149 2961 aa5.52□□□□□ -1.53
TRIM41-209ENST00000515834 PKD1L1Q8TDX9 2849 aa5.47□□□□□ -1.53
TRIM41-209ENST00000515834 TENM2Q9NT68 2774 aa5.47□□□□□ -1.53
TRIM41-209ENST00000515834 EYSQ5T1H1 3165 aa5.47□□□□□ -1.53
TRIM41-209ENST00000515834 USP34Q70CQ2 3546 aa5.45□□□□□ -1.54
TRIM41-209ENST00000515834 NBEAQ8NFP9 2946 aa5.45□□□□□ -1.54
TRIM41-209ENST00000515834 TNRC18O15417 2968 aaPredicted RBP5.43□□□□□ -1.54
TRIM41-209ENST00000515834 NIPBLQ6KC79 2804 aaeCLIP5.42□□□□□ -1.54
TRIM41-209ENST00000515834 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
TRIM41-209ENST00000515834 VWFP04275 2813 aa5.39□□□□□ -1.55
TRIM41-209ENST00000515834 PDZD2O15018 2839 aa5.38□□□□□ -1.55
TRIM41-209ENST00000515834 CELSR1Q9NYQ6 3014 aa5.35□□□□□ -1.55
TRIM41-209ENST00000515834 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
TRIM41-209ENST00000515834 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
TRIM41-209ENST00000515834 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
TRIM41-209ENST00000515834 MYO15AQ9UKN7 3530 aa5.3□□□□□ -1.56
TRIM41-209ENST00000515834 ZANQ9Y493 2812 aa5.3□□□□□ -1.56
TRIM41-209ENST00000515834 SPTBN5Q9NRC6 3674 aaKnown RBP5.3□□□□□ -1.56
TRIM41-209ENST00000515834 DMXL1Q9Y485 3027 aa5.29□□□□□ -1.56
TRIM41-209ENST00000515834 FBN2P35556 2912 aa5.27□□□□□ -1.57
TRIM41-209ENST00000515834 LOC400499M0QZD8 3231 aa5.27□□□□□ -1.57
TRIM41-209ENST00000515834 TGP01266 2768 aa5.27□□□□□ -1.57
TRIM41-209ENST00000515834 SRRM2Q9UQ35 2752 aaKnown RBP5.24□□□□□ -1.57
TRIM41-209ENST00000515834 NBPF19A0A087WUL8 3843 aa5.22□□□□□ -1.57
TRIM41-209ENST00000515834 KRTAP12-1P59990 96 aa5.22□□□□□ -1.57
TRIM41-209ENST00000515834 ZFHX4Q86UP3 3567 aa5.2□□□□□ -1.58
TRIM41-209ENST00000515834 ASPMQ8IZT6 3477 aa5.17□□□□□ -1.58
TRIM41-209ENST00000515834 DCHS1Q96JQ0 3298 aa5.14□□□□□ -1.59
TRIM41-209ENST00000515834 WDFY3Q8IZQ1 3526 aa5.13□□□□□ -1.59
TRIM41-209ENST00000515834 HRNRQ86YZ3 2850 aaPredicted RBP5.1□□□□□ -1.59
TRIM41-209ENST00000515834 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
TRIM41-209ENST00000515834 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
TRIM41-209ENST00000515834 ZFHX3Q15911 3703 aa5.02□□□□□ -1.61
TRIM41-209ENST00000515834 RELNP78509 3460 aa5.02□□□□□ -1.61
TRIM41-209ENST00000515834 MXRA5Q9NR99 2828 aa5.02□□□□□ -1.61
TRIM41-209ENST00000515834 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
TRIM41-209ENST00000515834 FBN3Q75N90 2809 aa4.96□□□□□ -1.62
TRIM41-209ENST00000515834 MT1HL1P0DM35 61 aa4.96□□□□□ -1.62
TRIM41-209ENST00000515834 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
TRIM41-209ENST00000515834 COL7A1Q02388 2944 aa4.92□□□□□ -1.62
TRIM41-209ENST00000515834 FBN1P35555 2871 aaKnown RBP4.91□□□□□ -1.62
TRIM41-209ENST00000515834 LORP23490 312 aaPredicted RBP4.85□□□□□ -1.63
TRIM41-209ENST00000515834 CSMD1Q96PZ7 3565 aa4.83□□□□□ -1.64
TRIM41-209ENST00000515834 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
TRIM41-209ENST00000515834 LAMA5O15230 3695 aa4.82□□□□□ -1.64
TRIM41-209ENST00000515834 MEGF8Q7Z7M0 2845 aa4.81□□□□□ -1.64
TRIM41-209ENST00000515834 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
TRIM41-209ENST00000515834 CUBNO60494 3623 aa4.77□□□□□ -1.65
TRIM41-209ENST00000515834 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
TRIM41-209ENST00000515834 ANK3Q12955 4377 aaKnown RBP4.76□□□□□ -1.65
TRIM41-209ENST00000515834 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
TRIM41-209ENST00000515834 INE1O15225 51 aa4.74□□□□□ -1.65
TRIM41-209ENST00000515834 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
TRIM41-209ENST00000515834 KRTAP3-2Q9BYR7 98 aa4.71□□□□□ -1.66
TRIM41-209ENST00000515834 DMDP11532 3685 aa4.7□□□□□ -1.66
TRIM41-209ENST00000515834 SPENQ96T58 3664 aaKnown RBP4.69□□□□□ -1.66
TRIM41-209ENST00000515834 CSMD2Q7Z408 3487 aa4.67□□□□□ -1.66
TRIM41-209ENST00000515834 SMG1Q96Q15 3661 aaKnown RBP4.64□□□□□ -1.67
TRIM41-209ENST00000515834 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
TRIM41-209ENST00000515834 TRRAPQ9Y4A5 3859 aa4.63□□□□□ -1.67
TRIM41-209ENST00000515834 HUWE1Q7Z6Z7 4374 aaKnown RBP4.62□□□□□ -1.67
TRIM41-209ENST00000515834 OTOGQ6ZRI0 2925 aa4.62□□□□□ -1.67
TRIM41-209ENST00000515834 ALMS1Q8TCU4 4167 aa4.62□□□□□ -1.67
TRIM41-209ENST00000515834 MUC3AQ02505 3323 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms