RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 ADM2Q7Z4H4 148 aa8.53□□□□□ -1.04
TRIO-218ENST00000512070 COL12A1Q99715 3063 aa8.51□□□□□ -1.05
TRIO-218ENST00000512070 TACC2O95359 2948 aa8.5□□□□□ -1.05
TRIO-218ENST00000512070 LOC400499M0QZD8 3231 aa8.48□□□□□ -1.05
TRIO-218ENST00000512070 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
TRIO-218ENST00000512070 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
TRIO-218ENST00000512070 LCE6AA0A183 80 aa8.42□□□□□ -1.06
TRIO-218ENST00000512070 ZZEF1O43149 2961 aa8.42□□□□□ -1.06
TRIO-218ENST00000512070 A6NN06 94 aa8.41□□□□□ -1.06
TRIO-218ENST00000512070 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
TRIO-218ENST00000512070 CFAP47Q6ZTR5 3102 aa8.37□□□□□ -1.07
TRIO-218ENST00000512070 NIPBLQ6KC79 2804 aaeCLIP8.37□□□□□ -1.07
TRIO-218ENST00000512070 WDFY3Q8IZQ1 3526 aa8.34□□□□□ -1.07
TRIO-218ENST00000512070 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
TRIO-218ENST00000512070 A8MUU9 505 aa8.33□□□□□ -1.08
TRIO-218ENST00000512070 P0C880 135 aa8.3□□□□□ -1.08
TRIO-218ENST00000512070 C20orf166-AS1Q96NR2 134 aa8.3□□□□□ -1.08
TRIO-218ENST00000512070 KRTAP10-2P60368 255 aa8.29□□□□□ -1.08
TRIO-218ENST00000512070 ASH1LQ9NR48 2969 aaKnown RBP8.28□□□□□ -1.08
TRIO-218ENST00000512070 PP632Q6XCG6 107 aa8.27□□□□□ -1.09
TRIO-218ENST00000512070 HRNRQ86YZ3 2850 aaPredicted RBP8.27□□□□□ -1.09
TRIO-218ENST00000512070 NOTCH2NLQ7Z3S9 236 aa8.27□□□□□ -1.09
TRIO-218ENST00000512070 ZANQ9Y493 2812 aa8.26□□□□□ -1.09
TRIO-218ENST00000512070 DMDP11532 3685 aa8.25□□□□□ -1.09
TRIO-218ENST00000512070 TENM1Q9UKZ4 2725 aa8.24□□□□□ -1.09
TRIO-218ENST00000512070 TNP1P09430 55 aa8.24□□□□□ -1.09
TRIO-218ENST00000512070 NF1P21359 2839 aa8.23□□□□□ -1.09
TRIO-218ENST00000512070 CRYBG3Q68DQ2 2970 aa8.19□□□□□ -1.1
TRIO-218ENST00000512070 LAMA5O15230 3695 aa8.18□□□□□ -1.1
TRIO-218ENST00000512070 CELSR2Q9HCU4 2923 aa8.18□□□□□ -1.1
TRIO-218ENST00000512070 NDUFAF8A1L188 74 aa8.18□□□□□ -1.1
TRIO-218ENST00000512070 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
TRIO-218ENST00000512070 MUC3AQ02505 3323 aa8.17□□□□□ -1.1
TRIO-218ENST00000512070 ASPMQ8IZT6 3477 aa8.11□□□□□ -1.11
TRIO-218ENST00000512070 Q6ZRN7 208 aaPredicted RBP8.11□□□□□ -1.11
TRIO-218ENST00000512070 KRTAP13-1Q8IUC0 172 aa8.1□□□□□ -1.11
TRIO-218ENST00000512070 KRTAP11-1Q8IUC1 163 aa8.1□□□□□ -1.11
TRIO-218ENST00000512070 A8MU10 97 aa8.09□□□□□ -1.11
TRIO-218ENST00000512070 RELNP78509 3460 aa8.09□□□□□ -1.12
TRIO-218ENST00000512070 DCHS2Q6V1P9 2916 aa8.05□□□□□ -1.12
TRIO-218ENST00000512070 ZFHX4Q86UP3 3567 aa8.04□□□□□ -1.12
TRIO-218ENST00000512070 FBN2P35556 2912 aa8.03□□□□□ -1.12
TRIO-218ENST00000512070 C10orf95Q9H7T3 257 aa8□□□□□ -1.13
TRIO-218ENST00000512070 TGP01266 2768 aa7.99□□□□□ -1.13
TRIO-218ENST00000512070 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
TRIO-218ENST00000512070 TENM4Q6N022 2769 aa7.98□□□□□ -1.13
TRIO-218ENST00000512070 DCHS1Q96JQ0 3298 aa7.97□□□□□ -1.13
TRIO-218ENST00000512070 MXRA5Q9NR99 2828 aa7.94□□□□□ -1.14
TRIO-218ENST00000512070 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
TRIO-218ENST00000512070 PDZD2O15018 2839 aa7.89□□□□□ -1.15
TRIO-218ENST00000512070 SMG1Q96Q15 3661 aaKnown RBP7.86□□□□□ -1.15
TRIO-218ENST00000512070 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
TRIO-218ENST00000512070 KRTAP21-3Q3LHN1 58 aa7.81□□□□□ -1.16
TRIO-218ENST00000512070 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
TRIO-218ENST00000512070 SPENQ96T58 3664 aaKnown RBP7.72□□□□□ -1.17
TRIO-218ENST00000512070 H0YAA0 97 aa7.72□□□□□ -1.17
TRIO-218ENST00000512070 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
TRIO-218ENST00000512070 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
TRIO-218ENST00000512070 CELSR1Q9NYQ6 3014 aa7.68□□□□□ -1.18
TRIO-218ENST00000512070 XP32Q5T750 250 aa7.67□□□□□ -1.18
TRIO-218ENST00000512070 NBPF19A0A087WUL8 3843 aa7.67□□□□□ -1.18
TRIO-218ENST00000512070 SVEP1Q4LDE5 3571 aa7.65□□□□□ -1.19
TRIO-218ENST00000512070 PKD1L1Q8TDX9 2849 aa7.61□□□□□ -1.19
TRIO-218ENST00000512070 VWFP04275 2813 aa7.59□□□□□ -1.19
TRIO-218ENST00000512070 BSNQ9UPA5 3926 aa7.58□□□□□ -1.2
TRIO-218ENST00000512070 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
TRIO-218ENST00000512070 TENM2Q9NT68 2774 aa7.46□□□□□ -1.21
TRIO-218ENST00000512070 ZFHX3Q15911 3703 aa7.44□□□□□ -1.22
TRIO-218ENST00000512070 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
TRIO-218ENST00000512070 OTOGQ6ZRI0 2925 aa7.41□□□□□ -1.22
TRIO-218ENST00000512070 FBN1P35555 2871 aaKnown RBP7.4□□□□□ -1.22
TRIO-218ENST00000512070 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.23
TRIO-218ENST00000512070 CUBNO60494 3623 aa7.38□□□□□ -1.23
TRIO-218ENST00000512070 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
TRIO-218ENST00000512070 CSMD2Q7Z408 3487 aa7.36□□□□□ -1.23
TRIO-218ENST00000512070 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
TRIO-218ENST00000512070 COL7A1Q02388 2944 aa7.31□□□□□ -1.24
TRIO-218ENST00000512070 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
TRIO-218ENST00000512070 TRRAPQ9Y4A5 3859 aa7.21□□□□□ -1.26
TRIO-218ENST00000512070 VPS13CQ709C8 3753 aa7.21□□□□□ -1.26
TRIO-218ENST00000512070 MEGF8Q7Z7M0 2845 aa7.16□□□□□ -1.26
TRIO-218ENST00000512070 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
TRIO-218ENST00000512070 ANK3Q12955 4377 aaKnown RBP7.14□□□□□ -1.27
TRIO-218ENST00000512070 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
TRIO-218ENST00000512070 INE1O15225 51 aa7.07□□□□□ -1.28
TRIO-218ENST00000512070 FBN3Q75N90 2809 aa7.03□□□□□ -1.28
TRIO-218ENST00000512070 ZNF469Q96JG9 3925 aaPredicted RBP7.01□□□□□ -1.29
TRIO-218ENST00000512070 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
TRIO-218ENST00000512070 AKAP9Q99996 3911 aa6.92□□□□□ -1.3
TRIO-218ENST00000512070 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
TRIO-218ENST00000512070 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
TRIO-218ENST00000512070 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
TRIO-218ENST00000512070 HUWE1Q7Z6Z7 4374 aaKnown RBP6.63□□□□□ -1.35
TRIO-218ENST00000512070 KRTAP10-12P60413 245 aa6.61□□□□□ -1.35
TRIO-218ENST00000512070 CSMD3Q7Z407 3707 aa6.6□□□□□ -1.35
TRIO-218ENST00000512070 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
TRIO-218ENST00000512070 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
TRIO-218ENST00000512070 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
TRIO-218ENST00000512070 KRTAP3-3Q9BYR6 98 aa6.36□□□□□ -1.39
TRIO-218ENST00000512070 DNAH9Q9NYC9 4486 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms