RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
TRIO-218ENST00000512070 PELP1Q8IZL8 1130 aaKnown RBP23.7■■□□□ 1.38
TRIO-218ENST00000512070 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
TRIO-218ENST00000512070 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
TRIO-218ENST00000512070 APLP2Q06481 763 aa22.55■■□□□ 1.2
TRIO-218ENST00000512070 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
TRIO-218ENST00000512070 MYT1Q01538 1121 aa22.48■■□□□ 1.19
TRIO-218ENST00000512070 FAM9AQ8IZU1 332 aaPredicted RBP22.46■■□□□ 1.19
TRIO-218ENST00000512070 ERICH6Q7L0X2 663 aa22.28■■□□□ 1.16
TRIO-218ENST00000512070 CENPBP07199 599 aaPredicted RBP22.27■■□□□ 1.16
TRIO-218ENST00000512070 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
TRIO-218ENST00000512070 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
TRIO-218ENST00000512070 NEFLP07196 543 aa21.82■■□□□ 1.08
TRIO-218ENST00000512070 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
TRIO-218ENST00000512070 YTHDC1Q96MU7 727 aaKnown RBP21.64■■□□□ 1.05
TRIO-218ENST00000512070 PCGF6Q9BYE7 350 aa21.64■■□□□ 1.05
TRIO-218ENST00000512070 DAXXQ9UER7 740 aaPredicted RBP21.39■■□□□ 1.01
TRIO-218ENST00000512070 TRIM41Q8WV44 630 aa21.31■■□□□ 1
TRIO-218ENST00000512070 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
TRIO-218ENST00000512070 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
TRIO-218ENST00000512070 ATP1B4Q9UN42 357 aaPredicted RBP21.11■□□□□ 0.97
TRIO-218ENST00000512070 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
TRIO-218ENST00000512070 RANGAP1P46060 587 aaPredicted RBP20.93■□□□□ 0.94
TRIO-218ENST00000512070 RTL5Q5HYW3 569 aaPredicted RBP20.87■□□□□ 0.93
TRIO-218ENST00000512070 ZNF316A6NFI3 1004 aaPredicted RBP20.79■□□□□ 0.92
TRIO-218ENST00000512070 HRCP23327 699 aa20.65■□□□□ 0.9
TRIO-218ENST00000512070 CLSPNQ9HAW4 1339 aa20.56■□□□□ 0.88
TRIO-218ENST00000512070 MYT1LQ9UL68 1186 aa20.46■□□□□ 0.87
TRIO-218ENST00000512070 POLR3GLQ9BT43 218 aa20.44■□□□□ 0.86
TRIO-218ENST00000512070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.38■□□□□ 0.85
TRIO-218ENST00000512070 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
TRIO-218ENST00000512070 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
TRIO-218ENST00000512070 ZBTB47Q9UFB7 747 aaPredicted RBP20.32■□□□□ 0.84
TRIO-218ENST00000512070 ITGAEP38570 1179 aa20.29■□□□□ 0.84
TRIO-218ENST00000512070 CDK11AQ9UQ88 783 aaPredicted RBP20.25■□□□□ 0.83
TRIO-218ENST00000512070 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
TRIO-218ENST00000512070 PPARGC1BQ86YN6 1023 aaKnown RBP20.19■□□□□ 0.82
TRIO-218ENST00000512070 ANP32CO43423 234 aa20.12■□□□□ 0.81
TRIO-218ENST00000512070 ANP32BQ92688 251 aaKnown RBP20.07■□□□□ 0.8
TRIO-218ENST00000512070 ANP32AP39687 249 aaKnown RBP20.05■□□□□ 0.8
TRIO-218ENST00000512070 NEFMP07197 916 aa20.04■□□□□ 0.8
TRIO-218ENST00000512070 GLIPR1L2Q4G1C9 344 aa20.03■□□□□ 0.8
TRIO-218ENST00000512070 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
TRIO-218ENST00000512070 CANXP27824 592 aaKnown RBP19.95■□□□□ 0.78
TRIO-218ENST00000512070 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
TRIO-218ENST00000512070 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
TRIO-218ENST00000512070 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
TRIO-218ENST00000512070 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
TRIO-218ENST00000512070 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.77
TRIO-218ENST00000512070 UPF2Q9HAU5 1272 aaKnown RBP19.83■□□□□ 0.76
TRIO-218ENST00000512070 HSP90AA1P07900 732 aaKnown RBP19.73■□□□□ 0.75
TRIO-218ENST00000512070 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
TRIO-218ENST00000512070 BCANQ96GW7 911 aa19.65■□□□□ 0.74
TRIO-218ENST00000512070 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
TRIO-218ENST00000512070 ZNF326Q5BKZ1 582 aaKnown RBP19.6■□□□□ 0.73
TRIO-218ENST00000512070 ABCC9O60706 1549 aa19.6■□□□□ 0.73
TRIO-218ENST00000512070 SLC24A1O60721 1099 aa19.58■□□□□ 0.73
TRIO-218ENST00000512070 EIF5BO60841 1220 aaKnown RBP19.55■□□□□ 0.72
TRIO-218ENST00000512070 ANP32EQ9BTT0 268 aa19.53■□□□□ 0.72
TRIO-218ENST00000512070 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.52■□□□□ 0.72
TRIO-218ENST00000512070 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
TRIO-218ENST00000512070 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
TRIO-218ENST00000512070 NPM2Q86SE8 214 aaKnown RBP19.41■□□□□ 0.7
TRIO-218ENST00000512070 CDK11BP21127 795 aaKnown RBP19.4■□□□□ 0.7
TRIO-218ENST00000512070 TNNT2P45379 298 aaPredicted RBP19.34■□□□□ 0.69
TRIO-218ENST00000512070 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
TRIO-218ENST00000512070 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
TRIO-218ENST00000512070 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
TRIO-218ENST00000512070 ESF1Q9H501 851 aaKnown RBP19.31■□□□□ 0.68
TRIO-218ENST00000512070 MYH16Q9H6N6 1097 aa19.31■□□□□ 0.68
TRIO-218ENST00000512070 BECN1Q14457 450 aa19.3■□□□□ 0.68
TRIO-218ENST00000512070 DDRGK1Q96HY6 314 aa19.3■□□□□ 0.68
TRIO-218ENST00000512070 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
TRIO-218ENST00000512070 FKBP8Q14318 412 aa19.29■□□□□ 0.68
TRIO-218ENST00000512070 HNRNPUQ00839 825 aaKnown RBP eCLIP19.27■□□□□ 0.67
TRIO-218ENST00000512070 GOLGA6L22H0YM25 854 aa19.25■□□□□ 0.67
TRIO-218ENST00000512070 TRIM44Q96DX7 344 aaPredicted RBP19.23■□□□□ 0.67
TRIO-218ENST00000512070 TMC1Q8TDI8 760 aa19.23■□□□□ 0.67
TRIO-218ENST00000512070 NCLP19338 710 aaKnown RBP19.21■□□□□ 0.67
TRIO-218ENST00000512070 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
TRIO-218ENST00000512070 WDR43Q15061 677 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRIO-218ENST00000512070 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
TRIO-218ENST00000512070 FBLN2P98095 1184 aa19.16■□□□□ 0.66
TRIO-218ENST00000512070 STAG3Q9UJ98 1225 aa19.14■□□□□ 0.65
TRIO-218ENST00000512070 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
TRIO-218ENST00000512070 ZRSR1Q15695 479 aaKnown RBP19.09■□□□□ 0.65
TRIO-218ENST00000512070 ERICH6BQ5W0A0 696 aa19.07■□□□□ 0.64
TRIO-218ENST00000512070 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
TRIO-218ENST00000512070 CASC1Q6TDU7 716 aa19.06■□□□□ 0.64
TRIO-218ENST00000512070 NBR1Q14596 966 aa19.06■□□□□ 0.64
TRIO-218ENST00000512070 ZNF777Q9ULD5 760 aaPredicted RBP19.06■□□□□ 0.64
TRIO-218ENST00000512070 MRS2Q9HD23 443 aa18.99■□□□□ 0.63
TRIO-218ENST00000512070 CHMP4BQ9H444 224 aaKnown RBP18.98■□□□□ 0.63
TRIO-218ENST00000512070 GOLGA6L6A8MZA4 724 aa18.98■□□□□ 0.63
TRIO-218ENST00000512070 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
TRIO-218ENST00000512070 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
TRIO-218ENST00000512070 NRDCO43847 1150 aa18.97■□□□□ 0.63
TRIO-218ENST00000512070 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
TRIO-218ENST00000512070 CDCA8Q53HL2 280 aa18.95■□□□□ 0.62
TRIO-218ENST00000512070 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms