RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 LRBAP50851 2863 aa1.67□□□□□ -2.14
GYPA-208ENST00000512064 KRTAP10-10P60014 251 aa1.67□□□□□ -2.14
GYPA-208ENST00000512064 FRYQ5TBA9 3013 aa1.66□□□□□ -2.14
GYPA-208ENST00000512064 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
GYPA-208ENST00000512064 TRIOO75962 3097 aa1.65□□□□□ -2.14
GYPA-208ENST00000512064 CHD9Q3L8U1 2897 aa1.65□□□□□ -2.14
GYPA-208ENST00000512064 VWFP04275 2813 aa1.65□□□□□ -2.14
GYPA-208ENST00000512064 JMJD1CQ15652 2540 aa1.65□□□□□ -2.15
GYPA-208ENST00000512064 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
GYPA-208ENST00000512064 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
GYPA-208ENST00000512064 SONP18583 2426 aaKnown RBP1.65□□□□□ -2.15
GYPA-208ENST00000512064 HIVEP3Q5T1R4 2406 aa1.65□□□□□ -2.15
GYPA-208ENST00000512064 TRANK1O15050 2925 aa1.64□□□□□ -2.15
GYPA-208ENST00000512064 CFAP47Q6ZTR5 3102 aa1.64□□□□□ -2.15
GYPA-208ENST00000512064 CCDC168Q8NDH2 2452 aa1.64□□□□□ -2.15
GYPA-208ENST00000512064 BOD1L1Q8NFC6 3051 aa1.64□□□□□ -2.15
GYPA-208ENST00000512064 MKI67P46013 3256 aaKnown RBP1.64□□□□□ -2.15
GYPA-208ENST00000512064 CELSR1Q9NYQ6 3014 aa1.63□□□□□ -2.15
GYPA-208ENST00000512064 CENPEQ02224 2701 aa1.62□□□□□ -2.15
GYPA-208ENST00000512064 PTPN13Q12923 2485 aa1.62□□□□□ -2.15
GYPA-208ENST00000512064 SRRM2Q9UQ35 2752 aaKnown RBP1.62□□□□□ -2.15
GYPA-208ENST00000512064 TLN1Q9Y490 2541 aaKnown RBP1.62□□□□□ -2.15
GYPA-208ENST00000512064 UNC80Q8N2C7 3258 aa1.62□□□□□ -2.15
GYPA-208ENST00000512064 SZT2Q5T011 3432 aa1.62□□□□□ -2.15
GYPA-208ENST00000512064 RIF1Q5UIP0 2472 aaKnown RBP1.62□□□□□ -2.15
GYPA-208ENST00000512064 PKD1L2Q7Z442 2459 aa1.61□□□□□ -2.15
GYPA-208ENST00000512064 M0R2T5 61 aa1.61□□□□□ -2.15
GYPA-208ENST00000512064 DMXL1Q9Y485 3027 aa1.61□□□□□ -2.15
GYPA-208ENST00000512064 MUC6Q6W4X9 2439 aa1.6□□□□□ -2.15
GYPA-208ENST00000512064 BAHCC1Q9P281 2608 aa1.6□□□□□ -2.15
GYPA-208ENST00000512064 EP400Q96L91 3159 aa1.6□□□□□ -2.15
GYPA-208ENST00000512064 HTTP42858 3142 aa1.6□□□□□ -2.15
GYPA-208ENST00000512064 NF1P21359 2839 aa1.6□□□□□ -2.15
GYPA-208ENST00000512064 FBN1P35555 2871 aaKnown RBP1.59□□□□□ -2.15
GYPA-208ENST00000512064 KRTAP10-1P60331 282 aa1.59□□□□□ -2.15
GYPA-208ENST00000512064 CRYBG3Q68DQ2 2970 aa1.59□□□□□ -2.15
GYPA-208ENST00000512064 NIPBLQ6KC79 2804 aaeCLIP1.59□□□□□ -2.16
GYPA-208ENST00000512064 DCHS1Q96JQ0 3298 aa1.59□□□□□ -2.16
GYPA-208ENST00000512064 REV3LO60673 3130 aa1.59□□□□□ -2.16
GYPA-208ENST00000512064 TLN2Q9Y4G6 2542 aa1.59□□□□□ -2.16
GYPA-208ENST00000512064 MEGF8Q7Z7M0 2845 aa1.58□□□□□ -2.16
GYPA-208ENST00000512064 TACC2O95359 2948 aa1.58□□□□□ -2.16
GYPA-208ENST00000512064 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
GYPA-208ENST00000512064 COL12A1Q99715 3063 aa1.58□□□□□ -2.16
GYPA-208ENST00000512064 LAMA2P24043 3122 aaKnown RBP1.57□□□□□ -2.16
GYPA-208ENST00000512064 DMBT1Q9UGM3 2413 aaPredicted RBP1.57□□□□□ -2.16
GYPA-208ENST00000512064 LAMA1P25391 3075 aa1.57□□□□□ -2.16
GYPA-208ENST00000512064 DOPEY1Q5JWR5 2465 aa1.57□□□□□ -2.16
GYPA-208ENST00000512064 MYO9AB2RTY4 2548 aa1.57□□□□□ -2.16
GYPA-208ENST00000512064 ACANP16112 2415 aa1.57□□□□□ -2.16
GYPA-208ENST00000512064 CEP290O15078 2479 aa1.57□□□□□ -2.16
GYPA-208ENST00000512064 LRRK2Q5S007 2527 aa1.57□□□□□ -2.16
GYPA-208ENST00000512064 DMXL2Q8TDJ6 3036 aa1.56□□□□□ -2.16
GYPA-208ENST00000512064 TENM4Q6N022 2769 aa1.56□□□□□ -2.16
GYPA-208ENST00000512064 APCP25054 2843 aa1.56□□□□□ -2.16
GYPA-208ENST00000512064 UTP20O75691 2785 aaKnown RBP1.55□□□□□ -2.16
GYPA-208ENST00000512064 TGP01266 2768 aa1.55□□□□□ -2.16
GYPA-208ENST00000512064 SPTBN5Q9NRC6 3674 aaKnown RBP1.54□□□□□ -2.16
GYPA-208ENST00000512064 DCHS2Q6V1P9 2916 aa1.54□□□□□ -2.16
GYPA-208ENST00000512064 CACNA1AO00555 2505 aa1.54□□□□□ -2.16
GYPA-208ENST00000512064 TEX15Q9BXT5 2789 aa1.53□□□□□ -2.16
GYPA-208ENST00000512064 CFAP46Q8IYW2 2715 aa1.53□□□□□ -2.16
GYPA-208ENST00000512064 PIEZO1Q92508 2521 aa1.53□□□□□ -2.16
GYPA-208ENST00000512064 USP9XQ93008 2570 aaPredicted RBP1.53□□□□□ -2.16
GYPA-208ENST00000512064 VPS13DQ5THJ4 4388 aa1.52□□□□□ -2.17
GYPA-208ENST00000512064 J3QKU1 62 aa1.52□□□□□ -2.17
GYPA-208ENST00000512064 KRTAP21-3Q3LHN1 58 aa1.52□□□□□ -2.17
GYPA-208ENST00000512064 AKAP9Q99996 3911 aa1.52□□□□□ -2.17
GYPA-208ENST00000512064 ITPR3Q14573 2671 aa1.52□□□□□ -2.17
GYPA-208ENST00000512064 SETXQ7Z333 2677 aaKnown RBP1.52□□□□□ -2.17
GYPA-208ENST00000512064 HELZ2Q9BYK8 2649 aaKnown RBP1.52□□□□□ -2.17
GYPA-208ENST00000512064 MTORP42345 2549 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 C5orf42Q9H799 3197 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 ATMQ13315 3056 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 ZFHX4Q86UP3 3567 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 USP34Q70CQ2 3546 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 COL7A1Q02388 2944 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 PDZD2O15018 2839 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 SPEGQ15772 3267 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 DMDP11532 3685 aa1.51□□□□□ -2.17
GYPA-208ENST00000512064 SETD2Q9BYW2 2564 aaPredicted RBP1.51□□□□□ -2.17
GYPA-208ENST00000512064 HECTD1Q9ULT8 2610 aa1.5□□□□□ -2.17
GYPA-208ENST00000512064 FREM2Q5SZK8 3169 aa1.5□□□□□ -2.17
GYPA-208ENST00000512064 KRTAP2-3P0C7H8 128 aa1.49□□□□□ -2.17
GYPA-208ENST00000512064 KRTAP2-4Q9BYR9 128 aa1.49□□□□□ -2.17
GYPA-208ENST00000512064 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
GYPA-208ENST00000512064 ZFYVE26Q68DK2 2539 aa1.49□□□□□ -2.17
GYPA-208ENST00000512064 DNAH14Q0VDD8 3507 aa1.49□□□□□ -2.17
GYPA-208ENST00000512064 UNC79Q9P2D8 2635 aa1.49□□□□□ -2.17
GYPA-208ENST00000512064 TTC28Q96AY4 2481 aa1.48□□□□□ -2.17
GYPA-208ENST00000512064 XIRP2A4UGR9 3374 aa1.48□□□□□ -2.17
GYPA-208ENST00000512064 CELSR3Q9NYQ7 3312 aa1.47□□□□□ -2.17
GYPA-208ENST00000512064 ABCA12Q86UK0 2595 aa1.47□□□□□ -2.17
GYPA-208ENST00000512064 CHD8Q9HCK8 2581 aa1.47□□□□□ -2.17
GYPA-208ENST00000512064 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
GYPA-208ENST00000512064 LCE3DQ9BYE3 92 aa1.47□□□□□ -2.17
GYPA-208ENST00000512064 USP24Q9UPU5 2620 aa1.47□□□□□ -2.17
GYPA-208ENST00000512064 NBEAL2Q6ZNJ1 2754 aa1.47□□□□□ -2.17
GYPA-208ENST00000512064 ADGRG4Q8IZF6 3080 aa1.46□□□□□ -2.18
GYPA-208ENST00000512064 GCN1Q92616 2671 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms