RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 AEBP2Q6ZN18 517 aaPredicted RBP15□□□□□ -0.01
GYPA-208ENST00000512064 CHIC1Q5VXU3 224 aa14.16□□□□□ -0.14
GYPA-208ENST00000512064 SENP3Q9H4L4 574 aaPredicted RBP13.03□□□□□ -0.32
GYPA-208ENST00000512064 PHF23Q9BUL5 403 aaPredicted RBP12.72□□□□□ -0.37
GYPA-208ENST00000512064 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
GYPA-208ENST00000512064 FOXD1Q16676 465 aa12.12□□□□□ -0.47
GYPA-208ENST00000512064 MSH5O43196 834 aa11.68□□□□□ -0.54
GYPA-208ENST00000512064 PIAS4Q8N2W9 510 aaPredicted RBP11.23□□□□□ -0.61
GYPA-208ENST00000512064 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
GYPA-208ENST00000512064 PLPPR3Q6T4P5 718 aa10.8□□□□□ -0.68
GYPA-208ENST00000512064 ADRA2BP18089 450 aa10.79□□□□□ -0.68
GYPA-208ENST00000512064 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
GYPA-208ENST00000512064 DMRT2Q9Y5R5 561 aa10.2□□□□□ -0.78
GYPA-208ENST00000512064 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
GYPA-208ENST00000512064 SCAF1Q9H7N4 1312 aaKnown RBP10.05□□□□□ -0.8
GYPA-208ENST00000512064 RNF39Q9H2S5 420 aa9.84□□□□□ -0.83
GYPA-208ENST00000512064 DCAF8L1A6NGE4 600 aa9.8□□□□□ -0.84
GYPA-208ENST00000512064 C1QBPQ07021 282 aaKnown RBP9.73□□□□□ -0.85
GYPA-208ENST00000512064 HOXD11P31277 338 aaPredicted RBP9.62□□□□□ -0.87
GYPA-208ENST00000512064 POTEHQ6S545 545 aa9.53□□□□□ -0.88
GYPA-208ENST00000512064 DNAJC5BQ9UF47 199 aa9.49□□□□□ -0.89
GYPA-208ENST00000512064 RNF216Q9NWF9 866 aaPredicted RBP9.41□□□□□ -0.9
GYPA-208ENST00000512064 PPP4R3CPQ6ZMV5 832 aa9.37□□□□□ -0.91
GYPA-208ENST00000512064 CNKSR2Q8WXI2 1034 aa9.35□□□□□ -0.91
GYPA-208ENST00000512064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.16□□□□□ -0.94
GYPA-208ENST00000512064 NCBP3Q53F19 620 aaKnown RBP9.07□□□□□ -0.96
GYPA-208ENST00000512064 DSG3P32926 999 aa9.01□□□□□ -0.97
GYPA-208ENST00000512064 KCNA4P22459 653 aa8.97□□□□□ -0.97
GYPA-208ENST00000512064 CAPN15O75808 1086 aa8.95□□□□□ -0.98
GYPA-208ENST00000512064 NPM3O75607 178 aaKnown RBP8.93□□□□□ -0.98
GYPA-208ENST00000512064 SPINK5Q9NQ38 1064 aaPredicted RBP8.87□□□□□ -0.99
GYPA-208ENST00000512064 U3KPZ7 1027 aaPredicted RBP8.86□□□□□ -0.99
GYPA-208ENST00000512064 APLP2Q06481 763 aa8.73□□□□□ -1.01
GYPA-208ENST00000512064 RBM42Q9BTD8 480 aaKnown RBP8.73□□□□□ -1.01
GYPA-208ENST00000512064 ZNF219Q9P2Y4 722 aaPredicted RBP8.7□□□□□ -1.02
GYPA-208ENST00000512064 CHRDL2Q6WN34 429 aa8.68□□□□□ -1.02
GYPA-208ENST00000512064 SP7Q8TDD2 431 aaPredicted RBP8.68□□□□□ -1.02
GYPA-208ENST00000512064 TRHP20396 242 aaPredicted RBP8.65□□□□□ -1.02
GYPA-208ENST00000512064 ABCB7O75027 752 aa8.64□□□□□ -1.03
GYPA-208ENST00000512064 EHMT2Q96KQ7 1210 aa8.57□□□□□ -1.04
GYPA-208ENST00000512064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.55□□□□□ -1.04
GYPA-208ENST00000512064 HNRNPUL2Q1KMD3 747 aaKnown RBP8.55□□□□□ -1.04
GYPA-208ENST00000512064 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
GYPA-208ENST00000512064 SLC4A2P04920 1241 aa8.46□□□□□ -1.06
GYPA-208ENST00000512064 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
GYPA-208ENST00000512064 CSRNP3Q8WYN3 585 aa8.39□□□□□ -1.07
GYPA-208ENST00000512064 HAX1O00165 279 aa8.36□□□□□ -1.07
GYPA-208ENST00000512064 AKT1S1Q96B36 256 aa8.36□□□□□ -1.07
GYPA-208ENST00000512064 PIP4P2Q8N4L2 257 aa8.32□□□□□ -1.08
GYPA-208ENST00000512064 FOXD4L1Q9NU39 408 aa8.3□□□□□ -1.08
GYPA-208ENST00000512064 POLA2Q14181 598 aa8.29□□□□□ -1.08
GYPA-208ENST00000512064 MYCNP04198 464 aaPredicted RBP8.26□□□□□ -1.09
GYPA-208ENST00000512064 ZBTB22O15209 634 aa8.23□□□□□ -1.09
GYPA-208ENST00000512064 REM2Q8IYK8 340 aaPredicted RBP8.22□□□□□ -1.09
GYPA-208ENST00000512064 FXR2P51116 673 aaKnown RBP eCLIP8.21□□□□□ -1.1
GYPA-208ENST00000512064 ZBTB12Q9Y330 459 aaPredicted RBP8.19□□□□□ -1.1
GYPA-208ENST00000512064 PITPNM1O00562 1244 aa8.13□□□□□ -1.11
GYPA-208ENST00000512064 LHX8Q68G74 356 aa8.13□□□□□ -1.11
GYPA-208ENST00000512064 EVX2Q03828 476 aa8.1□□□□□ -1.11
GYPA-208ENST00000512064 ATF5Q9Y2D1 282 aaPredicted RBP8.07□□□□□ -1.12
GYPA-208ENST00000512064 PLSCR2Q9NRY7 297 aa8.06□□□□□ -1.12
GYPA-208ENST00000512064 OSCARQ8IYS5 282 aa8.02□□□□□ -1.13
GYPA-208ENST00000512064 ATXN8OSP0DMR3 200 aa7.99□□□□□ -1.13
GYPA-208ENST00000512064 GABBR2O75899 941 aa7.97□□□□□ -1.13
GYPA-208ENST00000512064 C19orf67A6NJJ6 358 aa7.96□□□□□ -1.14
GYPA-208ENST00000512064 PRKAR2AP13861 404 aaKnown RBP7.93□□□□□ -1.14
GYPA-208ENST00000512064 SPDYE1Q8NFV5 336 aaPredicted RBP7.85□□□□□ -1.15
GYPA-208ENST00000512064 SPDYE2BA6NHP3 402 aa7.84□□□□□ -1.15
GYPA-208ENST00000512064 SPDYE6P0CI01 402 aa7.84□□□□□ -1.15
GYPA-208ENST00000512064 SPDYE2Q495Y8 402 aa7.84□□□□□ -1.15
GYPA-208ENST00000512064 CLEC11AQ9Y240 323 aa7.82□□□□□ -1.16
GYPA-208ENST00000512064 CLCN6P51797 869 aa7.81□□□□□ -1.16
GYPA-208ENST00000512064 POTEIP0CG38 1075 aa7.74□□□□□ -1.17
GYPA-208ENST00000512064 FBLN2P98095 1184 aa7.74□□□□□ -1.17
GYPA-208ENST00000512064 DCBLD2Q96PD2 775 aa7.69□□□□□ -1.18
GYPA-208ENST00000512064 PCDH10Q9P2E7 1040 aa7.69□□□□□ -1.18
GYPA-208ENST00000512064 POTEMA6NI47 508 aa7.68□□□□□ -1.18
GYPA-208ENST00000512064 MKRN4PQ13434 485 aaPredicted RBP7.68□□□□□ -1.18
GYPA-208ENST00000512064 CHADLQ6NUI6 762 aa7.67□□□□□ -1.18
GYPA-208ENST00000512064 CD44P16070 742 aaKnown RBP7.66□□□□□ -1.18
GYPA-208ENST00000512064 MYT1Q01538 1121 aa7.66□□□□□ -1.18
GYPA-208ENST00000512064 PRR29P0C7W0 189 aa7.64□□□□□ -1.19
GYPA-208ENST00000512064 ZNF692Q9BU19 519 aaPredicted RBP7.63□□□□□ -1.19
GYPA-208ENST00000512064 SSUH2Q9Y2M2 353 aa7.63□□□□□ -1.19
GYPA-208ENST00000512064 AMER1Q5JTC6 1135 aaPredicted RBP7.62□□□□□ -1.19
GYPA-208ENST00000512064 POTEGQ6S5H5 508 aa7.62□□□□□ -1.19
GYPA-208ENST00000512064 OTUD5Q96G74 571 aa7.6□□□□□ -1.19
GYPA-208ENST00000512064 FARP1Q9Y4F1 1045 aaPredicted RBP7.56□□□□□ -1.2
GYPA-208ENST00000512064 ZNF579Q8NAF0 562 aaKnown RBP7.53□□□□□ -1.2
GYPA-208ENST00000512064 FKBP8Q14318 412 aa7.52□□□□□ -1.21
GYPA-208ENST00000512064 PELP1Q8IZL8 1130 aaKnown RBP7.52□□□□□ -1.21
GYPA-208ENST00000512064 RTN4Q9NQC3 1192 aaKnown RBP7.5□□□□□ -1.21
GYPA-208ENST00000512064 POTEB2H3BUK9 544 aa7.47□□□□□ -1.21
GYPA-208ENST00000512064 PABPN1Q86U42 306 aaKnown RBP eCLIP7.47□□□□□ -1.21
GYPA-208ENST00000512064 SPDYE4A6NLX3 237 aa7.46□□□□□ -1.22
GYPA-208ENST00000512064 ZRANB1Q9UGI0 708 aa7.46□□□□□ -1.22
GYPA-208ENST00000512064 TTBK1Q5TCY1 1321 aaPredicted RBP7.46□□□□□ -1.22
GYPA-208ENST00000512064 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
GYPA-208ENST00000512064 GALR2O43603 387 aaPredicted RBP7.42□□□□□ -1.22
GYPA-208ENST00000512064 MAMSTRQ6ZN01 415 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms