RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 CMYA5Q8N3K9 4069 aa5.42□□□□□ -1.54
SNF8-210ENST00000511214 HUWE1Q7Z6Z7 4374 aaKnown RBP5.41□□□□□ -1.54
SNF8-210ENST00000511214 A0A087WTM6 91 aa5.41□□□□□ -1.54
SNF8-210ENST00000511214 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.54
SNF8-210ENST00000511214 PSORS1C2Q9UIG4 136 aa5.4□□□□□ -1.54
SNF8-210ENST00000511214 ANK2Q01484 3957 aa5.4□□□□□ -1.55
SNF8-210ENST00000511214 A6NN06 94 aa5.39□□□□□ -1.55
SNF8-210ENST00000511214 FBN1P35555 2871 aaKnown RBP5.39□□□□□ -1.55
SNF8-210ENST00000511214 A8MU10 97 aa5.38□□□□□ -1.55
SNF8-210ENST00000511214 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
SNF8-210ENST00000511214 SSBP3-AS1Q7Z2R9 100 aa5.38□□□□□ -1.55
SNF8-210ENST00000511214 RTL8CO15255 209 aa5.37□□□□□ -1.55
SNF8-210ENST00000511214 ACYP2P14621 99 aa5.37□□□□□ -1.55
SNF8-210ENST00000511214 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
SNF8-210ENST00000511214 DYNC2H1Q8NCM8 4307 aaKnown RBP5.36□□□□□ -1.55
SNF8-210ENST00000511214 DNHD1Q96M86 4753 aa5.34□□□□□ -1.55
SNF8-210ENST00000511214 A0A087X002 238 aa5.34□□□□□ -1.55
SNF8-210ENST00000511214 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
SNF8-210ENST00000511214 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
SNF8-210ENST00000511214 DMAC1Q96GE9 116 aa5.34□□□□□ -1.55
SNF8-210ENST00000511214 COL6A5A8TX70 2615 aa5.34□□□□□ -1.55
SNF8-210ENST00000511214 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
SNF8-210ENST00000511214 Q5W150 140 aa5.32□□□□□ -1.56
SNF8-210ENST00000511214 STAB1Q9NY15 2570 aa5.32□□□□□ -1.56
SNF8-210ENST00000511214 SPINK7P58062 85 aa5.31□□□□□ -1.56
SNF8-210ENST00000511214 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
SNF8-210ENST00000511214 PRR26Q8N8Z3 221 aa5.31□□□□□ -1.56
SNF8-210ENST00000511214 LINC00313P59037 77 aa5.29□□□□□ -1.56
SNF8-210ENST00000511214 SPINK6Q6UWN8 80 aa5.29□□□□□ -1.56
SNF8-210ENST00000511214 ANAPC11Q9NYG5 84 aa5.29□□□□□ -1.56
SNF8-210ENST00000511214 NOTCH1P46531 2555 aa5.28□□□□□ -1.56
SNF8-210ENST00000511214 IGKV2-30P06310 120 aa5.28□□□□□ -1.56
SNF8-210ENST00000511214 KRTAP21-3Q3LHN1 58 aa5.28□□□□□ -1.56
SNF8-210ENST00000511214 CIRBP-AS1Q8TBR5 109 aa5.28□□□□□ -1.56
SNF8-210ENST00000511214 RBM12B-AS1Q9P1G2 102 aa5.28□□□□□ -1.56
SNF8-210ENST00000511214 DNAH10Q8IVF4 4471 aa5.27□□□□□ -1.57
SNF8-210ENST00000511214 C1orf134Q5TEV5 83 aa5.26□□□□□ -1.57
SNF8-210ENST00000511214 NBEAL1Q6ZS30 2694 aa5.26□□□□□ -1.57
SNF8-210ENST00000511214 DNAH9Q9NYC9 4486 aa5.26□□□□□ -1.57
SNF8-210ENST00000511214 TENM2Q9NT68 2774 aa5.25□□□□□ -1.57
SNF8-210ENST00000511214 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
SNF8-210ENST00000511214 A0A1B0GU69 56 aa5.23□□□□□ -1.57
SNF8-210ENST00000511214 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
SNF8-210ENST00000511214 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
SNF8-210ENST00000511214 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
SNF8-210ENST00000511214 STAB2Q8WWQ8 2551 aa5.23□□□□□ -1.57
SNF8-210ENST00000511214 KRTAP16-1A8MUX0 517 aa5.22□□□□□ -1.57
SNF8-210ENST00000511214 SRRM2Q9UQ35 2752 aaKnown RBP5.2□□□□□ -1.58
SNF8-210ENST00000511214 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
SNF8-210ENST00000511214 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
SNF8-210ENST00000511214 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
SNF8-210ENST00000511214 UQCR11O14957 56 aa5.18□□□□□ -1.58
SNF8-210ENST00000511214 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
SNF8-210ENST00000511214 LYSTQ99698 3801 aa5.18□□□□□ -1.58
SNF8-210ENST00000511214 DNAH17Q9UFH2 4485 aa5.17□□□□□ -1.58
SNF8-210ENST00000511214 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
SNF8-210ENST00000511214 IGKV2D-30A0A075B6S6 120 aa5.17□□□□□ -1.58
SNF8-210ENST00000511214 MIR22HGQ0VDD5 57 aa5.16□□□□□ -1.58
SNF8-210ENST00000511214 Q6ZSA8 131 aa5.16□□□□□ -1.58
SNF8-210ENST00000511214 MGAM2Q2M2H8 2515 aa5.15□□□□□ -1.58
SNF8-210ENST00000511214 DNAH8Q96JB1 4490 aa5.14□□□□□ -1.59
SNF8-210ENST00000511214 PLECQ15149 4684 aaKnown RBP5.13□□□□□ -1.59
SNF8-210ENST00000511214 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
SNF8-210ENST00000511214 SPINK1P00995 79 aa5.12□□□□□ -1.59
SNF8-210ENST00000511214 KRTAP1-4P0C5Y4 121 aa5.12□□□□□ -1.59
SNF8-210ENST00000511214 RETNLBQ9BQ08 111 aa5.11□□□□□ -1.59
SNF8-210ENST00000511214 COL7A1Q02388 2944 aa5.1□□□□□ -1.59
SNF8-210ENST00000511214 LY6G6CO95867 125 aa5.09□□□□□ -1.59
SNF8-210ENST00000511214 KRTAP10-2P60368 255 aa5.09□□□□□ -1.59
SNF8-210ENST00000511214 HECTD4Q9Y4D8 3996 aa5.09□□□□□ -1.6
SNF8-210ENST00000511214 DNAH7Q8WXX0 4024 aa5.08□□□□□ -1.6
SNF8-210ENST00000511214 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
SNF8-210ENST00000511214 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
SNF8-210ENST00000511214 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
SNF8-210ENST00000511214 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
SNF8-210ENST00000511214 DNAH6Q9C0G6 4158 aa5.05□□□□□ -1.6
SNF8-210ENST00000511214 PRKDCP78527 4128 aaKnown RBP5.04□□□□□ -1.6
SNF8-210ENST00000511214 DNAH2Q9P225 4427 aa5.04□□□□□ -1.6
SNF8-210ENST00000511214 LINC01554Q52M75 96 aa5.03□□□□□ -1.6
SNF8-210ENST00000511214 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
SNF8-210ENST00000511214 FBN3Q75N90 2809 aa5.02□□□□□ -1.61
SNF8-210ENST00000511214 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
SNF8-210ENST00000511214 MEGF8Q7Z7M0 2845 aa5.01□□□□□ -1.61
SNF8-210ENST00000511214 STARD9Q9P2P6 4700 aa5.01□□□□□ -1.61
SNF8-210ENST00000511214 LINC00304Q8N9R0 145 aa5.01□□□□□ -1.61
SNF8-210ENST00000511214 ADM2Q7Z4H4 148 aa5□□□□□ -1.61
SNF8-210ENST00000511214 A8MUU9 505 aa4.99□□□□□ -1.61
SNF8-210ENST00000511214 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
SNF8-210ENST00000511214 Q8N1X5 172 aa4.97□□□□□ -1.61
SNF8-210ENST00000511214 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
SNF8-210ENST00000511214 TGP01266 2768 aa4.95□□□□□ -1.62
SNF8-210ENST00000511214 FRAS1Q86XX4 4008 aa4.94□□□□□ -1.62
SNF8-210ENST00000511214 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
SNF8-210ENST00000511214 A0A1B0GU33 70 aa4.92□□□□□ -1.62
SNF8-210ENST00000511214 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
SNF8-210ENST00000511214 DNAH5Q8TE73 4624 aa4.91□□□□□ -1.62
SNF8-210ENST00000511214 H0YAA0 97 aa4.91□□□□□ -1.62
SNF8-210ENST00000511214 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
SNF8-210ENST00000511214 KMT2AQ03164 3969 aa4.9□□□□□ -1.62
SNF8-210ENST00000511214 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms