RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ZANQ9Y493 2812 aa4.91□□□□□ -1.62
HTT-208ENST00000510626 TENM4Q6N022 2769 aa4.88□□□□□ -1.63
HTT-208ENST00000510626 TGP01266 2768 aa4.87□□□□□ -1.63
HTT-208ENST00000510626 SMR3BP02814 79 aaPredicted RBP4.86□□□□□ -1.63
HTT-208ENST00000510626 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
HTT-208ENST00000510626 C20orf166-AS1Q96NR2 134 aa4.85□□□□□ -1.63
HTT-208ENST00000510626 ADM2Q7Z4H4 148 aa4.83□□□□□ -1.64
HTT-208ENST00000510626 CELSR3Q9NYQ7 3312 aa4.83□□□□□ -1.64
HTT-208ENST00000510626 CFAP47Q6ZTR5 3102 aa4.82□□□□□ -1.64
HTT-208ENST00000510626 MXRA5Q9NR99 2828 aa4.82□□□□□ -1.64
HTT-208ENST00000510626 LAMA3Q16787 3333 aa4.82□□□□□ -1.64
HTT-208ENST00000510626 CELSR1Q9NYQ6 3014 aa4.82□□□□□ -1.64
HTT-208ENST00000510626 KRTAP11-1Q8IUC1 163 aa4.81□□□□□ -1.64
HTT-208ENST00000510626 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
HTT-208ENST00000510626 ATMQ13315 3056 aa4.81□□□□□ -1.64
HTT-208ENST00000510626 A8MUU9 505 aa4.8□□□□□ -1.64
HTT-208ENST00000510626 M0R2T5 61 aa4.78□□□□□ -1.64
HTT-208ENST00000510626 VCANP13611 3396 aa4.77□□□□□ -1.65
HTT-208ENST00000510626 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
HTT-208ENST00000510626 COL6A3P12111 3177 aa4.76□□□□□ -1.65
HTT-208ENST00000510626 FBN2P35556 2912 aa4.76□□□□□ -1.65
HTT-208ENST00000510626 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
HTT-208ENST00000510626 TNP1P09430 55 aa4.75□□□□□ -1.65
HTT-208ENST00000510626 SRRM2Q9UQ35 2752 aaKnown RBP4.74□□□□□ -1.65
HTT-208ENST00000510626 KRTAP10-1P60331 282 aa4.7□□□□□ -1.66
HTT-208ENST00000510626 Q5VSD8 79 aa4.68□□□□□ -1.66
HTT-208ENST00000510626 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
HTT-208ENST00000510626 PKD1L1Q8TDX9 2849 aa4.66□□□□□ -1.66
HTT-208ENST00000510626 A8MU10 97 aa4.66□□□□□ -1.66
HTT-208ENST00000510626 USP34Q70CQ2 3546 aa4.65□□□□□ -1.66
HTT-208ENST00000510626 DNAH14Q0VDD8 3507 aa4.63□□□□□ -1.67
HTT-208ENST00000510626 KRTAP10-2P60368 255 aa4.62□□□□□ -1.67
HTT-208ENST00000510626 P0C880 135 aa4.62□□□□□ -1.67
HTT-208ENST00000510626 BRCA2P51587 3418 aa4.61□□□□□ -1.67
HTT-208ENST00000510626 HRNRQ86YZ3 2850 aaPredicted RBP4.61□□□□□ -1.67
HTT-208ENST00000510626 KRTAP7-1Q8IUC3 87 aa4.6□□□□□ -1.67
HTT-208ENST00000510626 VWFP04275 2813 aa4.58□□□□□ -1.68
HTT-208ENST00000510626 H0YAA0 97 aa4.57□□□□□ -1.68
HTT-208ENST00000510626 KRTAP13-2Q52LG2 175 aa4.55□□□□□ -1.68
HTT-208ENST00000510626 TENM2Q9NT68 2774 aa4.55□□□□□ -1.68
HTT-208ENST00000510626 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
HTT-208ENST00000510626 EYSQ5T1H1 3165 aa4.54□□□□□ -1.68
HTT-208ENST00000510626 CDH23Q9H251 3354 aa4.5□□□□□ -1.69
HTT-208ENST00000510626 COL7A1Q02388 2944 aa4.48□□□□□ -1.69
HTT-208ENST00000510626 INE1O15225 51 aa4.47□□□□□ -1.69
HTT-208ENST00000510626 ZFHX3Q15911 3703 aa4.47□□□□□ -1.69
HTT-208ENST00000510626 SPEGQ15772 3267 aa4.45□□□□□ -1.7
HTT-208ENST00000510626 LOC400499M0QZD8 3231 aa4.45□□□□□ -1.7
HTT-208ENST00000510626 KRTAP13-3Q3SY46 172 aa4.43□□□□□ -1.7
HTT-208ENST00000510626 TPRXLQ17RH7 258 aa4.41□□□□□ -1.7
HTT-208ENST00000510626 MEGF8Q7Z7M0 2845 aa4.39□□□□□ -1.71
HTT-208ENST00000510626 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
HTT-208ENST00000510626 KRTAP1-4P0C5Y4 121 aa4.37□□□□□ -1.71
HTT-208ENST00000510626 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
HTT-208ENST00000510626 SZT2Q5T011 3432 aa4.35□□□□□ -1.71
HTT-208ENST00000510626 FBN1P35555 2871 aaKnown RBP4.35□□□□□ -1.71
HTT-208ENST00000510626 XP32Q5T750 250 aa4.34□□□□□ -1.71
HTT-208ENST00000510626 MYO15AQ9UKN7 3530 aa4.33□□□□□ -1.72
HTT-208ENST00000510626 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
HTT-208ENST00000510626 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
HTT-208ENST00000510626 FBN3Q75N90 2809 aa4.31□□□□□ -1.72
HTT-208ENST00000510626 OTOGQ6ZRI0 2925 aa4.26□□□□□ -1.73
HTT-208ENST00000510626 KRTAP10-8P60410 259 aa4.24□□□□□ -1.73
HTT-208ENST00000510626 SPTBN5Q9NRC6 3674 aaKnown RBP4.24□□□□□ -1.73
HTT-208ENST00000510626 AKAP9Q99996 3911 aa4.22□□□□□ -1.73
HTT-208ENST00000510626 DCHS1Q96JQ0 3298 aa4.18□□□□□ -1.74
HTT-208ENST00000510626 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
HTT-208ENST00000510626 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
HTT-208ENST00000510626 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
HTT-208ENST00000510626 ASPMQ8IZT6 3477 aa4.14□□□□□ -1.75
HTT-208ENST00000510626 LAMA5O15230 3695 aa4.13□□□□□ -1.75
HTT-208ENST00000510626 WDFY3Q8IZQ1 3526 aa4.13□□□□□ -1.75
HTT-208ENST00000510626 SPENQ96T58 3664 aaKnown RBP4.07□□□□□ -1.76
HTT-208ENST00000510626 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
HTT-208ENST00000510626 NBPF19A0A087WUL8 3843 aa4.06□□□□□ -1.76
HTT-208ENST00000510626 RELNP78509 3460 aa4.05□□□□□ -1.76
HTT-208ENST00000510626 ZFHX4Q86UP3 3567 aa4.04□□□□□ -1.76
HTT-208ENST00000510626 TRRAPQ9Y4A5 3859 aa4.04□□□□□ -1.76
HTT-208ENST00000510626 DMDP11532 3685 aa4.02□□□□□ -1.77
HTT-208ENST00000510626 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
HTT-208ENST00000510626 ALMS1Q8TCU4 4167 aa4□□□□□ -1.77
HTT-208ENST00000510626 SMG1Q96Q15 3661 aaKnown RBP3.98□□□□□ -1.77
HTT-208ENST00000510626 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
HTT-208ENST00000510626 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
HTT-208ENST00000510626 CSMD1Q96PZ7 3565 aa3.96□□□□□ -1.78
HTT-208ENST00000510626 MUC3AQ02505 3323 aa3.96□□□□□ -1.78
HTT-208ENST00000510626 DNAH1Q9P2D7 4330 aa3.93□□□□□ -1.78
HTT-208ENST00000510626 A0A1B0GVY2 172 aa3.92□□□□□ -1.78
HTT-208ENST00000510626 VPS13CQ709C8 3753 aa3.9□□□□□ -1.79
HTT-208ENST00000510626 DNAH3Q8TD57 4116 aa3.9□□□□□ -1.79
HTT-208ENST00000510626 CUBNO60494 3623 aa3.88□□□□□ -1.79
HTT-208ENST00000510626 ZNF469Q96JG9 3925 aaPredicted RBP3.86□□□□□ -1.79
HTT-208ENST00000510626 CMYA5Q8N3K9 4069 aa3.86□□□□□ -1.79
HTT-208ENST00000510626 KRTAP3-2Q9BYR7 98 aa3.84□□□□□ -1.79
HTT-208ENST00000510626 BSNQ9UPA5 3926 aa3.84□□□□□ -1.8
HTT-208ENST00000510626 SVEP1Q4LDE5 3571 aa3.8□□□□□ -1.8
HTT-208ENST00000510626 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
HTT-208ENST00000510626 HUWE1Q7Z6Z7 4374 aaKnown RBP3.76□□□□□ -1.81
HTT-208ENST00000510626 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
HTT-208ENST00000510626 FRAS1Q86XX4 4008 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms