RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 HIVEP1P15822 2718 aa5.61□□□□□ -1.51
NEK1-206ENST00000510533 ASH1LQ9NR48 2969 aaKnown RBP5.61□□□□□ -1.51
NEK1-206ENST00000510533 DMXL2Q8TDJ6 3036 aa5.6□□□□□ -1.51
NEK1-206ENST00000510533 CELSR3Q9NYQ7 3312 aa5.59□□□□□ -1.51
NEK1-206ENST00000510533 ATMQ13315 3056 aa5.58□□□□□ -1.52
NEK1-206ENST00000510533 FLNCQ14315 2725 aa5.58□□□□□ -1.52
NEK1-206ENST00000510533 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
NEK1-206ENST00000510533 P0C880 135 aa5.55□□□□□ -1.52
NEK1-206ENST00000510533 KRTAP21-3Q3LHN1 58 aa5.54□□□□□ -1.52
NEK1-206ENST00000510533 NIPBLQ6KC79 2804 aaeCLIP5.54□□□□□ -1.52
NEK1-206ENST00000510533 NBEAQ8NFP9 2946 aa5.54□□□□□ -1.52
NEK1-206ENST00000510533 COL12A1Q99715 3063 aa5.53□□□□□ -1.52
NEK1-206ENST00000510533 LRBAP50851 2863 aa5.53□□□□□ -1.52
NEK1-206ENST00000510533 ADGRG4Q8IZF6 3080 aa5.51□□□□□ -1.53
NEK1-206ENST00000510533 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
NEK1-206ENST00000510533 TENM4Q6N022 2769 aa5.49□□□□□ -1.53
NEK1-206ENST00000510533 CDH23Q9H251 3354 aa5.49□□□□□ -1.53
NEK1-206ENST00000510533 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
NEK1-206ENST00000510533 CELSR2Q9HCU4 2923 aa5.48□□□□□ -1.53
NEK1-206ENST00000510533 REV3LO60673 3130 aa5.48□□□□□ -1.53
NEK1-206ENST00000510533 FRYLO94915 3013 aa5.45□□□□□ -1.54
NEK1-206ENST00000510533 LAMA1P25391 3075 aa5.44□□□□□ -1.54
NEK1-206ENST00000510533 CRYBG3Q68DQ2 2970 aa5.43□□□□□ -1.54
NEK1-206ENST00000510533 BOD1L1Q8NFC6 3051 aa5.43□□□□□ -1.54
NEK1-206ENST00000510533 VCANP13611 3396 aa5.43□□□□□ -1.54
NEK1-206ENST00000510533 KRTAP13-3Q3SY46 172 aa5.41□□□□□ -1.54
NEK1-206ENST00000510533 DCHS2Q6V1P9 2916 aa5.4□□□□□ -1.54
NEK1-206ENST00000510533 ZZEF1O43149 2961 aa5.4□□□□□ -1.54
NEK1-206ENST00000510533 COL6A3P12111 3177 aa5.39□□□□□ -1.55
NEK1-206ENST00000510533 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
NEK1-206ENST00000510533 DNAH14Q0VDD8 3507 aa5.37□□□□□ -1.55
NEK1-206ENST00000510533 CFAP47Q6ZTR5 3102 aa5.36□□□□□ -1.55
NEK1-206ENST00000510533 SZT2Q5T011 3432 aa5.35□□□□□ -1.55
NEK1-206ENST00000510533 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
NEK1-206ENST00000510533 ZANQ9Y493 2812 aa5.33□□□□□ -1.56
NEK1-206ENST00000510533 EYSQ5T1H1 3165 aa5.32□□□□□ -1.56
NEK1-206ENST00000510533 TENM3Q9P273 2699 aa5.3□□□□□ -1.56
NEK1-206ENST00000510533 TGP01266 2768 aa5.28□□□□□ -1.56
NEK1-206ENST00000510533 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
NEK1-206ENST00000510533 TENM1Q9UKZ4 2725 aa5.27□□□□□ -1.57
NEK1-206ENST00000510533 HRNRQ86YZ3 2850 aaPredicted RBP5.25□□□□□ -1.57
NEK1-206ENST00000510533 TNRC18O15417 2968 aaPredicted RBP5.24□□□□□ -1.57
NEK1-206ENST00000510533 FBN2P35556 2912 aa5.22□□□□□ -1.57
NEK1-206ENST00000510533 NF1P21359 2839 aa5.22□□□□□ -1.57
NEK1-206ENST00000510533 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
NEK1-206ENST00000510533 TENM2Q9NT68 2774 aa5.19□□□□□ -1.58
NEK1-206ENST00000510533 KRTAP12-1P59990 96 aa5.17□□□□□ -1.58
NEK1-206ENST00000510533 SPEGQ15772 3267 aa5.16□□□□□ -1.58
NEK1-206ENST00000510533 USP34Q70CQ2 3546 aa5.15□□□□□ -1.59
NEK1-206ENST00000510533 CELSR1Q9NYQ6 3014 aa5.14□□□□□ -1.59
NEK1-206ENST00000510533 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
NEK1-206ENST00000510533 SPTBN5Q9NRC6 3674 aaKnown RBP5.11□□□□□ -1.59
NEK1-206ENST00000510533 DMXL1Q9Y485 3027 aa5.07□□□□□ -1.6
NEK1-206ENST00000510533 PDZD2O15018 2839 aa5.03□□□□□ -1.6
NEK1-206ENST00000510533 MXRA5Q9NR99 2828 aa5.02□□□□□ -1.61
NEK1-206ENST00000510533 LOC400499M0QZD8 3231 aa5.01□□□□□ -1.61
NEK1-206ENST00000510533 PKD1L1Q8TDX9 2849 aa5.01□□□□□ -1.61
NEK1-206ENST00000510533 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
NEK1-206ENST00000510533 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
NEK1-206ENST00000510533 VWFP04275 2813 aa4.96□□□□□ -1.62
NEK1-206ENST00000510533 MYO15AQ9UKN7 3530 aa4.94□□□□□ -1.62
NEK1-206ENST00000510533 WDFY3Q8IZQ1 3526 aa4.88□□□□□ -1.63
NEK1-206ENST00000510533 RELNP78509 3460 aa4.82□□□□□ -1.64
NEK1-206ENST00000510533 DCHS1Q96JQ0 3298 aa4.81□□□□□ -1.64
NEK1-206ENST00000510533 KRTAP3-2Q9BYR7 98 aa4.81□□□□□ -1.64
NEK1-206ENST00000510533 INE1O15225 51 aa4.78□□□□□ -1.64
NEK1-206ENST00000510533 KRTAP3-3Q9BYR6 98 aa4.78□□□□□ -1.64
NEK1-206ENST00000510533 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
NEK1-206ENST00000510533 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
NEK1-206ENST00000510533 FBN1P35555 2871 aaKnown RBP4.74□□□□□ -1.65
NEK1-206ENST00000510533 MEGF8Q7Z7M0 2845 aa4.74□□□□□ -1.65
NEK1-206ENST00000510533 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
NEK1-206ENST00000510533 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
NEK1-206ENST00000510533 ZFHX4Q86UP3 3567 aa4.71□□□□□ -1.66
NEK1-206ENST00000510533 NBPF19A0A087WUL8 3843 aa4.68□□□□□ -1.66
NEK1-206ENST00000510533 ASPMQ8IZT6 3477 aa4.68□□□□□ -1.66
NEK1-206ENST00000510533 OTOGQ6ZRI0 2925 aa4.66□□□□□ -1.66
NEK1-206ENST00000510533 ANK3Q12955 4377 aaKnown RBP4.65□□□□□ -1.66
NEK1-206ENST00000510533 CSMD1Q96PZ7 3565 aa4.65□□□□□ -1.66
NEK1-206ENST00000510533 LAMA5O15230 3695 aa4.62□□□□□ -1.67
NEK1-206ENST00000510533 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
NEK1-206ENST00000510533 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
NEK1-206ENST00000510533 KRTAP10-4P60372 401 aaPredicted RBP4.61□□□□□ -1.67
NEK1-206ENST00000510533 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
NEK1-206ENST00000510533 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
NEK1-206ENST00000510533 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
NEK1-206ENST00000510533 ZFHX3Q15911 3703 aa4.55□□□□□ -1.68
NEK1-206ENST00000510533 DMDP11532 3685 aa4.54□□□□□ -1.68
NEK1-206ENST00000510533 KRTAP4-5Q9BYR2 181 aa4.51□□□□□ -1.69
NEK1-206ENST00000510533 SMG1Q96Q15 3661 aaKnown RBP4.5□□□□□ -1.69
NEK1-206ENST00000510533 LORP23490 312 aaPredicted RBP4.49□□□□□ -1.69
NEK1-206ENST00000510533 HUWE1Q7Z6Z7 4374 aaKnown RBP4.46□□□□□ -1.7
NEK1-206ENST00000510533 TRRAPQ9Y4A5 3859 aa4.46□□□□□ -1.7
NEK1-206ENST00000510533 MUC3AQ02505 3323 aa4.42□□□□□ -1.7
NEK1-206ENST00000510533 SVEP1Q4LDE5 3571 aa4.42□□□□□ -1.7
NEK1-206ENST00000510533 CSMD2Q7Z408 3487 aa4.39□□□□□ -1.71
NEK1-206ENST00000510533 CUBNO60494 3623 aa4.37□□□□□ -1.71
NEK1-206ENST00000510533 ALMS1Q8TCU4 4167 aa4.34□□□□□ -1.71
NEK1-206ENST00000510533 SPENQ96T58 3664 aaKnown RBP4.34□□□□□ -1.71
NEK1-206ENST00000510533 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms