RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 MTORP42345 2549 aa0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 VPS13AQ96RL7 3174 aa0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 LOC730098B7Z3J9 87 aa0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 NBPF19A0A087WUL8 3843 aa0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 RIF1Q5UIP0 2472 aaKnown RBP0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 TLN2Q9Y4G6 2542 aa0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 XIRP2A4UGR9 3374 aa0.54□□□□□ -2.32
SMARCAD1-205ENST00000506089 LINC00158P58513 81 aa0.54□□□□□ -2.32
SMARCAD1-205ENST00000506089 DMXL1Q9Y485 3027 aa0.54□□□□□ -2.32
SMARCAD1-205ENST00000506089 FREM2Q5SZK8 3169 aa0.54□□□□□ -2.32
SMARCAD1-205ENST00000506089 HIVEP1P15822 2718 aa0.54□□□□□ -2.32
SMARCAD1-205ENST00000506089 ITPR2Q14571 2701 aa0.54□□□□□ -2.32
SMARCAD1-205ENST00000506089 CSPG4Q6UVK1 2322 aa0.54□□□□□ -2.32
SMARCAD1-205ENST00000506089 STAB2Q8WWQ8 2551 aa0.53□□□□□ -2.32
SMARCAD1-205ENST00000506089 C3P01024 1663 aa0.53□□□□□ -2.32
SMARCAD1-205ENST00000506089 RNF213Q63HN8 5207 aa0.53□□□□□ -2.33
SMARCAD1-205ENST00000506089 MUC3AQ02505 3323 aa0.53□□□□□ -2.33
SMARCAD1-205ENST00000506089 NF1P21359 2839 aa0.52□□□□□ -2.33
SMARCAD1-205ENST00000506089 HERC1Q15751 4861 aa0.52□□□□□ -2.33
SMARCAD1-205ENST00000506089 PRUNE2Q8WUY3 3088 aa0.52□□□□□ -2.33
SMARCAD1-205ENST00000506089 COL7A1Q02388 2944 aa0.52□□□□□ -2.33
SMARCAD1-205ENST00000506089 DMXL2Q8TDJ6 3036 aa0.52□□□□□ -2.33
SMARCAD1-205ENST00000506089 TIAM1Q13009 1591 aa0.52□□□□□ -2.33
SMARCAD1-205ENST00000506089 ABCA13Q86UQ4 5058 aa0.52□□□□□ -2.33
SMARCAD1-205ENST00000506089 ETDCA0A1B0GVM5 59 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 DNAH14Q0VDD8 3507 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 DEFB114Q30KQ6 69 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 S100ZQ8WXG8 99 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 DNHD1Q96M86 4753 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 CSMD2Q7Z408 3487 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 CDH23Q9H251 3354 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 ZZEF1O43149 2961 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 CHD7Q9P2D1 2997 aa0.51□□□□□ -2.33
SMARCAD1-205ENST00000506089 DMBT1Q9UGM3 2413 aaPredicted RBP0.5□□□□□ -2.33
SMARCAD1-205ENST00000506089 KMT2DO14686 5537 aa0.5□□□□□ -2.33
SMARCAD1-205ENST00000506089 SPTA1P02549 2419 aa0.5□□□□□ -2.33
SMARCAD1-205ENST00000506089 ABCA6Q8N139 1617 aa0.49□□□□□ -2.33
SMARCAD1-205ENST00000506089 SSPOA2VEC9 5147 aa0.49□□□□□ -2.33
SMARCAD1-205ENST00000506089 M0R2T5 61 aa0.49□□□□□ -2.33
SMARCAD1-205ENST00000506089 LAMA1P25391 3075 aa0.49□□□□□ -2.33
SMARCAD1-205ENST00000506089 LYNX1G3V0Z9 82 aa0.48□□□□□ -2.33
SMARCAD1-205ENST00000506089 H0YAA0 97 aa0.48□□□□□ -2.33
SMARCAD1-205ENST00000506089 TACC2O95359 2948 aa0.48□□□□□ -2.33
SMARCAD1-205ENST00000506089 ACANP16112 2415 aa0.48□□□□□ -2.33
SMARCAD1-205ENST00000506089 MYO15AQ9UKN7 3530 aa0.48□□□□□ -2.33
SMARCAD1-205ENST00000506089 CENPEQ02224 2701 aa0.48□□□□□ -2.33
SMARCAD1-205ENST00000506089 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
SMARCAD1-205ENST00000506089 KNL1Q8NG31 2342 aa0.47□□□□□ -2.33
SMARCAD1-205ENST00000506089 LINC01549A6NIU2 74 aa0.47□□□□□ -2.33
SMARCAD1-205ENST00000506089 ABCC6O95255 1503 aa0.47□□□□□ -2.33
SMARCAD1-205ENST00000506089 KIAA0586Q9BVV6 1533 aa0.47□□□□□ -2.33
SMARCAD1-205ENST00000506089 SRRM2Q9UQ35 2752 aaKnown RBP0.46□□□□□ -2.34
SMARCAD1-205ENST00000506089 PRM1P04553 51 aa0.46□□□□□ -2.34
SMARCAD1-205ENST00000506089 DEFB135Q30KP9 77 aa0.46□□□□□ -2.34
SMARCAD1-205ENST00000506089 SPENQ96T58 3664 aaKnown RBP0.46□□□□□ -2.34
SMARCAD1-205ENST00000506089 HMCN2Q8NDA2 5059 aa0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 SONP18583 2426 aaKnown RBP0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 WDFY3Q8IZQ1 3526 aa0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 ADGRG4Q8IZF6 3080 aa0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 ABCA10Q8WWZ4 1543 aa0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 CUBNO60494 3623 aa0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 WNK1Q9H4A3 2382 aa0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 LRP1Q07954 4544 aaKnown RBP0.45□□□□□ -2.34
SMARCAD1-205ENST00000506089 SMG1Q96Q15 3661 aaKnown RBP0.44□□□□□ -2.34
SMARCAD1-205ENST00000506089 VPS13CQ709C8 3753 aa0.44□□□□□ -2.34
SMARCAD1-205ENST00000506089 CRIP1P50238 77 aa0.44□□□□□ -2.34
SMARCAD1-205ENST00000506089 SMIM5Q71RC9 77 aa0.44□□□□□ -2.34
SMARCAD1-205ENST00000506089 APC2O95996 2303 aa0.44□□□□□ -2.34
SMARCAD1-205ENST00000506089 LY75O60449 1722 aa0.44□□□□□ -2.34
SMARCAD1-205ENST00000506089 HERC2O95714 4834 aa0.43□□□□□ -2.34
SMARCAD1-205ENST00000506089 ALS2Q96Q42 1657 aa0.43□□□□□ -2.34
SMARCAD1-205ENST00000506089 SFTA3P0C7M3 94 aa0.42□□□□□ -2.34
SMARCAD1-205ENST00000506089 NBASA2RRP1 2371 aa0.42□□□□□ -2.34
SMARCAD1-205ENST00000506089 KIF1AQ12756 1690 aa0.42□□□□□ -2.34
SMARCAD1-205ENST00000506089 CLASP1Q7Z460 1538 aa0.42□□□□□ -2.34
SMARCAD1-205ENST00000506089 SVEP1Q4LDE5 3571 aa0.42□□□□□ -2.34
SMARCAD1-205ENST00000506089 KMT2AQ03164 3969 aa0.42□□□□□ -2.34
SMARCAD1-205ENST00000506089 ACACAQ13085 2346 aa0.42□□□□□ -2.34
SMARCAD1-205ENST00000506089 TNXBP22105 4242 aa0.41□□□□□ -2.34
SMARCAD1-205ENST00000506089 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
SMARCAD1-205ENST00000506089 IAPPP10997 89 aa0.41□□□□□ -2.34
SMARCAD1-205ENST00000506089 GLI2P10070 1586 aa0.4□□□□□ -2.34
SMARCAD1-205ENST00000506089 K7EMI3 77 aa0.4□□□□□ -2.35
SMARCAD1-205ENST00000506089 SPRR2DP22532 72 aa0.4□□□□□ -2.35
SMARCAD1-205ENST00000506089 MUC12Q9UKN1 5478 aa0.39□□□□□ -2.35
SMARCAD1-205ENST00000506089 H0YGG7 62 aa0.39□□□□□ -2.35
SMARCAD1-205ENST00000506089 DMDP11532 3685 aa0.39□□□□□ -2.35
SMARCAD1-205ENST00000506089 HUWE1Q7Z6Z7 4374 aaKnown RBP0.38□□□□□ -2.35
SMARCAD1-205ENST00000506089 CPS1P31327 1500 aa0.38□□□□□ -2.35
SMARCAD1-205ENST00000506089 KIF21BO75037 1637 aa0.38□□□□□ -2.35
SMARCAD1-205ENST00000506089 MAST1Q9Y2H9 1570 aa0.38□□□□□ -2.35
SMARCAD1-205ENST00000506089 FAT2Q9NYQ8 4349 aa0.38□□□□□ -2.35
SMARCAD1-205ENST00000506089 DEFB130BP0DP73 79 aa0.38□□□□□ -2.35
SMARCAD1-205ENST00000506089 DEFB130AP0DP74 79 aa0.38□□□□□ -2.35
SMARCAD1-205ENST00000506089 HRNRQ86YZ3 2850 aaPredicted RBP0.37□□□□□ -2.35
SMARCAD1-205ENST00000506089 SERF2P84101 59 aa0.37□□□□□ -2.35
SMARCAD1-205ENST00000506089 NCBP2-AS2Q69YL0 99 aa0.37□□□□□ -2.35
SMARCAD1-205ENST00000506089 EFCAB6Q5THR3 1501 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms