RNA–Protein interactions for RNA: ENST00000498479.5

RC3H2-210, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 5,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-210ENST00000498479 COX6B2Q6YFQ2 88 aa6.74□□□□□ -1.33
RC3H2-210ENST00000498479 KMT2BQ9UMN6 2715 aaPredicted RBP6.73□□□□□ -1.33
RC3H2-210ENST00000498479 NIPBLQ6KC79 2804 aaeCLIP6.73□□□□□ -1.332e-6■■■■□ 25.1
RC3H2-210ENST00000498479 STAB1Q9NY15 2570 aa6.73□□□□□ -1.33
RC3H2-210ENST00000498479 ITPR2Q14571 2701 aa6.73□□□□□ -1.33
RC3H2-210ENST00000498479 WDFY3Q8IZQ1 3526 aa6.73□□□□□ -1.33
RC3H2-210ENST00000498479 NSD1Q96L73 2696 aaPredicted RBP6.72□□□□□ -1.33
RC3H2-210ENST00000498479 RPS29P62273 56 aaKnown RBP6.71□□□□□ -1.33
RC3H2-210ENST00000498479 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
RC3H2-210ENST00000498479 FBN2P35556 2912 aa6.7□□□□□ -1.34
RC3H2-210ENST00000498479 LUZP6Q538Z0 58 aa6.69□□□□□ -1.34
RC3H2-210ENST00000498479 CELSR2Q9HCU4 2923 aa6.66□□□□□ -1.34
RC3H2-210ENST00000498479 MXRA5Q9NR99 2828 aa6.66□□□□□ -1.34
RC3H2-210ENST00000498479 HIVEP1P15822 2718 aa6.66□□□□□ -1.34
RC3H2-210ENST00000498479 NF1P21359 2839 aa6.64□□□□□ -1.35
RC3H2-210ENST00000498479 ZFHX4Q86UP3 3567 aa6.63□□□□□ -1.35
RC3H2-210ENST00000498479 DCHS1Q96JQ0 3298 aa6.63□□□□□ -1.35
RC3H2-210ENST00000498479 DCHS2Q6V1P9 2916 aa6.63□□□□□ -1.35
RC3H2-210ENST00000498479 Q6ZSA8 131 aa6.62□□□□□ -1.35
RC3H2-210ENST00000498479 STAB2Q8WWQ8 2551 aa6.6□□□□□ -1.35
RC3H2-210ENST00000498479 A8MUU9 505 aa6.58□□□□□ -1.36
RC3H2-210ENST00000498479 DMBT1Q9UGM3 2413 aaPredicted RBP6.57□□□□□ -1.36
RC3H2-210ENST00000498479 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
RC3H2-210ENST00000498479 CSMD1Q96PZ7 3565 aa6.56□□□□□ -1.36
RC3H2-210ENST00000498479 SMG1Q96Q15 3661 aaKnown RBP6.56□□□□□ -1.36
RC3H2-210ENST00000498479 RELNP78509 3460 aa6.53□□□□□ -1.36
RC3H2-210ENST00000498479 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
RC3H2-210ENST00000498479 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
RC3H2-210ENST00000498479 R4GN34 69 aa6.52□□□□□ -1.37
RC3H2-210ENST00000498479 A0A0A0MQY5 61 aa6.51□□□□□ -1.37
RC3H2-210ENST00000498479 C20orf166-AS1Q96NR2 134 aa6.51□□□□□ -1.37
RC3H2-210ENST00000498479 CRYBG3Q68DQ2 2970 aa6.51□□□□□ -1.37
RC3H2-210ENST00000498479 H0YAA0 97 aa6.51□□□□□ -1.37
RC3H2-210ENST00000498479 ASPMQ8IZT6 3477 aa6.47□□□□□ -1.37
RC3H2-210ENST00000498479 DMDP11532 3685 aa6.47□□□□□ -1.37
RC3H2-210ENST00000498479 M0QZ58 72 aa6.45□□□□□ -1.38
RC3H2-210ENST00000498479 KRTAP1-4P0C5Y4 121 aa6.45□□□□□ -1.38
RC3H2-210ENST00000498479 LAMA5O15230 3695 aa6.44□□□□□ -1.38
RC3H2-210ENST00000498479 J3QL48 77 aa6.44□□□□□ -1.38
RC3H2-210ENST00000498479 FLG2Q5D862 2391 aaPredicted RBP6.43□□□□□ -1.38
RC3H2-210ENST00000498479 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
RC3H2-210ENST00000498479 TENM3Q9P273 2699 aa6.4□□□□□ -1.39
RC3H2-210ENST00000498479 Q5VSD8 79 aa6.36□□□□□ -1.39
RC3H2-210ENST00000498479 CELSR1Q9NYQ6 3014 aa6.36□□□□□ -1.39
RC3H2-210ENST00000498479 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
RC3H2-210ENST00000498479 SVEP1Q4LDE5 3571 aa6.31□□□□□ -1.4
RC3H2-210ENST00000498479 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
RC3H2-210ENST00000498479 MUC3AQ02505 3323 aa6.25□□□□□ -1.41
RC3H2-210ENST00000498479 TGP01266 2768 aa6.24□□□□□ -1.41
RC3H2-210ENST00000498479 PDZD2O15018 2839 aa6.24□□□□□ -1.41
RC3H2-210ENST00000498479 TENM1Q9UKZ4 2725 aa6.22□□□□□ -1.41
RC3H2-210ENST00000498479 VWFP04275 2813 aa6.21□□□□□ -1.42
RC3H2-210ENST00000498479 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
RC3H2-210ENST00000498479 SPENQ96T58 3664 aaKnown RBP6.19□□□□□ -1.42
RC3H2-210ENST00000498479 P0C880 135 aa6.17□□□□□ -1.42
RC3H2-210ENST00000498479 XP32Q5T750 250 aa6.14□□□□□ -1.43
RC3H2-210ENST00000498479 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
RC3H2-210ENST00000498479 PP632Q6XCG6 107 aa6.12□□□□□ -1.43
RC3H2-210ENST00000498479 ANK3Q12955 4377 aaKnown RBP6.11□□□□□ -1.43
RC3H2-210ENST00000498479 TENM4Q6N022 2769 aa6.1□□□□□ -1.43
RC3H2-210ENST00000498479 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
RC3H2-210ENST00000498479 PKD1L1Q8TDX9 2849 aa6.04□□□□□ -1.44
RC3H2-210ENST00000498479 M0R2T5 61 aa6.04□□□□□ -1.44
RC3H2-210ENST00000498479 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
RC3H2-210ENST00000498479 TNP1P09430 55 aa6.02□□□□□ -1.45
RC3H2-210ENST00000498479 KRTAP12-2P59991 146 aa5.99□□□□□ -1.45
RC3H2-210ENST00000498479 CUBNO60494 3623 aa5.98□□□□□ -1.45
RC3H2-210ENST00000498479 OTOGQ6ZRI0 2925 aa5.97□□□□□ -1.45
RC3H2-210ENST00000498479 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.46
RC3H2-210ENST00000498479 NBPF19A0A087WUL8 3843 aa5.93□□□□□ -1.46
RC3H2-210ENST00000498479 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
RC3H2-210ENST00000498479 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
RC3H2-210ENST00000498479 FBN1P35555 2871 aaKnown RBP5.92□□□□□ -1.46
RC3H2-210ENST00000498479 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
RC3H2-210ENST00000498479 ZFHX3Q15911 3703 aa5.91□□□□□ -1.46
RC3H2-210ENST00000498479 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.47
RC3H2-210ENST00000498479 VPS13CQ709C8 3753 aa5.88□□□□□ -1.47
RC3H2-210ENST00000498479 CSMD2Q7Z408 3487 aa5.88□□□□□ -1.47
RC3H2-210ENST00000498479 KRTAP21-3Q3LHN1 58 aa5.87□□□□□ -1.47
RC3H2-210ENST00000498479 TRRAPQ9Y4A5 3859 aa5.87□□□□□ -1.47
RC3H2-210ENST00000498479 TENM2Q9NT68 2774 aa5.85□□□□□ -1.47
RC3H2-210ENST00000498479 A0A1B0GVY2 172 aa5.83□□□□□ -1.48
RC3H2-210ENST00000498479 FBN3Q75N90 2809 aa5.82□□□□□ -1.48
RC3H2-210ENST00000498479 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
RC3H2-210ENST00000498479 KRTAP3-2Q9BYR7 98 aa5.77□□□□□ -1.49
RC3H2-210ENST00000498479 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
RC3H2-210ENST00000498479 AKAP9Q99996 3911 aa5.76□□□□□ -1.49
RC3H2-210ENST00000498479 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
RC3H2-210ENST00000498479 HUWE1Q7Z6Z7 4374 aaKnown RBP5.74□□□□□ -1.49
RC3H2-210ENST00000498479 ZNF469Q96JG9 3925 aaPredicted RBP5.6□□□□□ -1.51
RC3H2-210ENST00000498479 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
RC3H2-210ENST00000498479 COL7A1Q02388 2944 aa5.53□□□□□ -1.52
RC3H2-210ENST00000498479 ALMS1Q8TCU4 4167 aa5.52□□□□□ -1.53
RC3H2-210ENST00000498479 DNAH9Q9NYC9 4486 aa5.44□□□□□ -1.54
RC3H2-210ENST00000498479 CSMD3Q7Z407 3707 aa5.43□□□□□ -1.54
RC3H2-210ENST00000498479 DNAH1Q9P2D7 4330 aa5.43□□□□□ -1.54
RC3H2-210ENST00000498479 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
RC3H2-210ENST00000498479 DNAH10Q8IVF4 4471 aa5.41□□□□□ -1.54
RC3H2-210ENST00000498479 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
RC3H2-210ENST00000498479 DNAH17Q9UFH2 4485 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms