RNA–Protein interactions for RNA: ENST00000498479.5

RC3H2-210, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 5,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-210ENST00000498479 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
RC3H2-210ENST00000498479 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
RC3H2-210ENST00000498479 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
RC3H2-210ENST00000498479 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
RC3H2-210ENST00000498479 PCGF6Q9BYE7 350 aa18.97■□□□□ 0.63
RC3H2-210ENST00000498479 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
RC3H2-210ENST00000498479 ZEB1P37275 1124 aaPredicted RBP18.75■□□□□ 0.59
RC3H2-210ENST00000498479 HRCP23327 699 aa18.74■□□□□ 0.59
RC3H2-210ENST00000498479 MYT1Q01538 1121 aa18.52■□□□□ 0.56
RC3H2-210ENST00000498479 CENPBP07199 599 aaPredicted RBP18.46■□□□□ 0.55
RC3H2-210ENST00000498479 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
RC3H2-210ENST00000498479 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
RC3H2-210ENST00000498479 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
RC3H2-210ENST00000498479 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
RC3H2-210ENST00000498479 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
RC3H2-210ENST00000498479 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
RC3H2-210ENST00000498479 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
RC3H2-210ENST00000498479 APLP2Q06481 763 aa18.09■□□□□ 0.49
RC3H2-210ENST00000498479 LOC105371045A0A1W2PR82 267 aa18■□□□□ 0.47
RC3H2-210ENST00000498479 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
RC3H2-210ENST00000498479 YTHDC1Q96MU7 727 aaKnown RBP17.8■□□□□ 0.44
RC3H2-210ENST00000498479 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
RC3H2-210ENST00000498479 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
RC3H2-210ENST00000498479 DIEXFQ68CQ4 756 aaKnown RBP17.66■□□□□ 0.42
RC3H2-210ENST00000498479 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
RC3H2-210ENST00000498479 NEFLP07196 543 aa17.58■□□□□ 0.4
RC3H2-210ENST00000498479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
RC3H2-210ENST00000498479 GTF3C3Q9Y5Q9 886 aa17.53■□□□□ 0.4
RC3H2-210ENST00000498479 ACIN1Q9UKV3 1341 aaKnown RBP17.52■□□□□ 0.4
RC3H2-210ENST00000498479 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
RC3H2-210ENST00000498479 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
RC3H2-210ENST00000498479 MYO15BQ96JP2 1530 aa17.33■□□□□ 0.37
RC3H2-210ENST00000498479 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
RC3H2-210ENST00000498479 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
RC3H2-210ENST00000498479 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
RC3H2-210ENST00000498479 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
RC3H2-210ENST00000498479 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
RC3H2-210ENST00000498479 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
RC3H2-210ENST00000498479 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
RC3H2-210ENST00000498479 ITGAEP38570 1179 aa17.01■□□□□ 0.31
RC3H2-210ENST00000498479 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
RC3H2-210ENST00000498479 BCANQ96GW7 911 aa16.87■□□□□ 0.29
RC3H2-210ENST00000498479 ANP32CO43423 234 aa16.81■□□□□ 0.28
RC3H2-210ENST00000498479 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
RC3H2-210ENST00000498479 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
RC3H2-210ENST00000498479 MIER1Q8N108 512 aa16.76■□□□□ 0.27
RC3H2-210ENST00000498479 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
RC3H2-210ENST00000498479 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
RC3H2-210ENST00000498479 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
RC3H2-210ENST00000498479 FAM50AQ14320 339 aaKnown RBP16.68■□□□□ 0.26
RC3H2-210ENST00000498479 FKBP8Q14318 412 aa16.66■□□□□ 0.26
RC3H2-210ENST00000498479 MYT1LQ9UL68 1186 aa16.62■□□□□ 0.25
RC3H2-210ENST00000498479 ABCC9O60706 1549 aa16.58■□□□□ 0.25
RC3H2-210ENST00000498479 POLR3GLQ9BT43 218 aa16.58■□□□□ 0.24
RC3H2-210ENST00000498479 EEA1Q15075 1411 aa16.57■□□□□ 0.24
RC3H2-210ENST00000498479 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
RC3H2-210ENST00000498479 ANP32EQ9BTT0 268 aa16.57■□□□□ 0.24
RC3H2-210ENST00000498479 RB1CC1Q8TDY2 1594 aa16.53■□□□□ 0.24
RC3H2-210ENST00000498479 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
RC3H2-210ENST00000498479 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
RC3H2-210ENST00000498479 DDX10Q13206 875 aaKnown RBP16.47■□□□□ 0.23
RC3H2-210ENST00000498479 CLIP1P30622 1438 aa16.46■□□□□ 0.23
RC3H2-210ENST00000498479 ANP32AP39687 249 aaKnown RBP16.46■□□□□ 0.23
RC3H2-210ENST00000498479 CNGB1Q14028 1251 aaPredicted RBP16.44■□□□□ 0.22
RC3H2-210ENST00000498479 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
RC3H2-210ENST00000498479 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
RC3H2-210ENST00000498479 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
RC3H2-210ENST00000498479 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
RC3H2-210ENST00000498479 TONSLQ96HA7 1378 aa16.37■□□□□ 0.21
RC3H2-210ENST00000498479 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
RC3H2-210ENST00000498479 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
RC3H2-210ENST00000498479 BCL11AQ9H165 835 aa16.21■□□□□ 0.19
RC3H2-210ENST00000498479 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
RC3H2-210ENST00000498479 P3H3Q8IVL6 736 aa16.19■□□□□ 0.18
RC3H2-210ENST00000498479 FAM9BQ8IZU0 186 aa16.18■□□□□ 0.18
RC3H2-210ENST00000498479 NPM2Q86SE8 214 aaKnown RBP16.17■□□□□ 0.18
RC3H2-210ENST00000498479 CCDC136Q96JN2 1154 aa16.17■□□□□ 0.18
RC3H2-210ENST00000498479 NACADO15069 1562 aa16.16■□□□□ 0.18
RC3H2-210ENST00000498479 NBR1Q14596 966 aa16.16■□□□□ 0.18
RC3H2-210ENST00000498479 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
RC3H2-210ENST00000498479 TSHZ2Q9NRE2 1034 aa16.15■□□□□ 0.18
RC3H2-210ENST00000498479 BAZ1AQ9NRL2 1556 aaPredicted RBP16.14■□□□□ 0.17
RC3H2-210ENST00000498479 CECR2Q9BXF3 1484 aa16.13■□□□□ 0.17
RC3H2-210ENST00000498479 IRX6P78412 446 aaPredicted RBP16.13■□□□□ 0.17
RC3H2-210ENST00000498479 SOGA1O94964 1423 aa16.12■□□□□ 0.17
RC3H2-210ENST00000498479 MRS2Q9HD23 443 aa16.12■□□□□ 0.17
RC3H2-210ENST00000498479 VPS8Q8N3P4 1428 aa16.11■□□□□ 0.17
RC3H2-210ENST00000498479 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
RC3H2-210ENST00000498479 CCER2I3L3R5 266 aa16.1■□□□□ 0.17
RC3H2-210ENST00000498479 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
RC3H2-210ENST00000498479 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
RC3H2-210ENST00000498479 PPP4R2Q9NY27 417 aa16.08■□□□□ 0.16
RC3H2-210ENST00000498479 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
RC3H2-210ENST00000498479 CCNB3Q8WWL7 1395 aa16.04■□□□□ 0.16
RC3H2-210ENST00000498479 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
RC3H2-210ENST00000498479 EIF5BO60841 1220 aaKnown RBP16.02■□□□□ 0.16
RC3H2-210ENST00000498479 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.16
RC3H2-210ENST00000498479 TMC1Q8TDI8 760 aa16■□□□□ 0.15
RC3H2-210ENST00000498479 ERICH6BQ5W0A0 696 aa16■□□□□ 0.15
RC3H2-210ENST00000498479 NOP58Q9Y2X3 529 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms