RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 NBASA2RRP1 2371 aa2.21□□□□□ -2.06
PDCD4-211ENST00000498367 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
PDCD4-211ENST00000498367 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
PDCD4-211ENST00000498367 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
PDCD4-211ENST00000498367 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
PDCD4-211ENST00000498367 DEFB108BQ8NET1 73 aa2.2□□□□□ -2.06
PDCD4-211ENST00000498367 SMR3AQ99954 134 aa2.2□□□□□ -2.06
PDCD4-211ENST00000498367 H3BNG1 76 aa2.19□□□□□ -2.06
PDCD4-211ENST00000498367 CEP250Q9BV73 2442 aa2.19□□□□□ -2.06
PDCD4-211ENST00000498367 FRYQ5TBA9 3013 aa2.18□□□□□ -2.06
PDCD4-211ENST00000498367 CHD8Q9HCK8 2581 aa2.15□□□□□ -2.06
PDCD4-211ENST00000498367 BDP1A6H8Y1 2624 aa2.15□□□□□ -2.06
PDCD4-211ENST00000498367 USP24Q9UPU5 2620 aa2.15□□□□□ -2.07
PDCD4-211ENST00000498367 MAP1BP46821 2468 aaKnown RBP2.14□□□□□ -2.07
PDCD4-211ENST00000498367 APCP25054 2843 aa2.14□□□□□ -2.07
PDCD4-211ENST00000498367 VPS13DQ5THJ4 4388 aa2.14□□□□□ -2.07
PDCD4-211ENST00000498367 DEFB110Q30KQ9 67 aa2.13□□□□□ -2.07
PDCD4-211ENST00000498367 U3KQA8 63 aa2.12□□□□□ -2.07
PDCD4-211ENST00000498367 PIEZO1Q92508 2521 aa2.12□□□□□ -2.07
PDCD4-211ENST00000498367 EPG5Q9HCE0 2579 aa2.1□□□□□ -2.07
PDCD4-211ENST00000498367 FAM186AA6NE01 2351 aa2.09□□□□□ -2.07
PDCD4-211ENST00000498367 DNAH11Q96DT5 4516 aa2.09□□□□□ -2.07
PDCD4-211ENST00000498367 NBPF19A0A087WUL8 3843 aa2.09□□□□□ -2.07
PDCD4-211ENST00000498367 WDR87Q6ZQQ6 2873 aa2.09□□□□□ -2.08
PDCD4-211ENST00000498367 ANK2Q01484 3957 aa2.09□□□□□ -2.08
PDCD4-211ENST00000498367 HELZ2Q9BYK8 2649 aaKnown RBP2.08□□□□□ -2.08
PDCD4-211ENST00000498367 PDZD2O15018 2839 aa2.08□□□□□ -2.08
PDCD4-211ENST00000498367 HIVEP3Q5T1R4 2406 aa2.08□□□□□ -2.08
PDCD4-211ENST00000498367 ZFHX4Q86UP3 3567 aa2.08□□□□□ -2.08
PDCD4-211ENST00000498367 BSNQ9UPA5 3926 aa2.07□□□□□ -2.08
PDCD4-211ENST00000498367 RANBP2P49792 3224 aaKnown RBP2.07□□□□□ -2.08
PDCD4-211ENST00000498367 DCHS2Q6V1P9 2916 aa2.06□□□□□ -2.08
PDCD4-211ENST00000498367 RIF1Q5UIP0 2472 aaKnown RBP2.06□□□□□ -2.08
PDCD4-211ENST00000498367 FBN2P35556 2912 aa2.05□□□□□ -2.08
PDCD4-211ENST00000498367 ITPR3Q14573 2671 aa2.05□□□□□ -2.08
PDCD4-211ENST00000498367 FLNCQ14315 2725 aa2.05□□□□□ -2.08
PDCD4-211ENST00000498367 USP9YO00507 2555 aaPredicted RBP2.04□□□□□ -2.08
PDCD4-211ENST00000498367 NF1P21359 2839 aa2.04□□□□□ -2.08
PDCD4-211ENST00000498367 LYSTQ99698 3801 aa2.04□□□□□ -2.08
PDCD4-211ENST00000498367 FRYLO94915 3013 aa2.03□□□□□ -2.08
PDCD4-211ENST00000498367 LINC01556Q5JQF7 62 aa2.03□□□□□ -2.08
PDCD4-211ENST00000498367 NCOR2Q9Y618 2525 aa2.03□□□□□ -2.08
PDCD4-211ENST00000498367 CFAP54Q96N23 3096 aa2.02□□□□□ -2.09
PDCD4-211ENST00000498367 COL12A1Q99715 3063 aa2.02□□□□□ -2.09
PDCD4-211ENST00000498367 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
PDCD4-211ENST00000498367 VPS13BQ7Z7G8 4022 aa2.02□□□□□ -2.09
PDCD4-211ENST00000498367 GCN1Q92616 2671 aaKnown RBP2.02□□□□□ -2.09
PDCD4-211ENST00000498367 MTORP42345 2549 aa2.01□□□□□ -2.09
PDCD4-211ENST00000498367 KMT2AQ03164 3969 aa2.01□□□□□ -2.09
PDCD4-211ENST00000498367 COL6A3P12111 3177 aa2□□□□□ -2.09
PDCD4-211ENST00000498367 AKAP9Q99996 3911 aa2□□□□□ -2.09
PDCD4-211ENST00000498367 LRRK2Q5S007 2527 aa2□□□□□ -2.09
PDCD4-211ENST00000498367 RPS29P62273 56 aaKnown RBP1.99□□□□□ -2.09
PDCD4-211ENST00000498367 DEFB133Q30KQ1 61 aa1.99□□□□□ -2.09
PDCD4-211ENST00000498367 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
PDCD4-211ENST00000498367 SACSQ9NZJ4 4579 aa1.98□□□□□ -2.09
PDCD4-211ENST00000498367 MYCBP2O75592 4640 aa1.98□□□□□ -2.09
PDCD4-211ENST00000498367 SPENQ96T58 3664 aaKnown RBP1.97□□□□□ -2.09
PDCD4-211ENST00000498367 A0A096LPF7 62 aa1.97□□□□□ -2.09
PDCD4-211ENST00000498367 CACNA1AO00555 2505 aa1.96□□□□□ -2.09
PDCD4-211ENST00000498367 PTPN13Q12923 2485 aa1.96□□□□□ -2.1
PDCD4-211ENST00000498367 ZZEF1O43149 2961 aa1.96□□□□□ -2.1
PDCD4-211ENST00000498367 PRM1P04553 51 aa1.95□□□□□ -2.1
PDCD4-211ENST00000498367 TNXBP22105 4242 aa1.93□□□□□ -2.1
PDCD4-211ENST00000498367 RELNP78509 3460 aa1.93□□□□□ -2.1
PDCD4-211ENST00000498367 ZNF469Q96JG9 3925 aaPredicted RBP1.93□□□□□ -2.1
PDCD4-211ENST00000498367 COL7A1Q02388 2944 aa1.93□□□□□ -2.1
PDCD4-211ENST00000498367 NSD1Q96L73 2696 aaPredicted RBP1.93□□□□□ -2.1
PDCD4-211ENST00000498367 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
PDCD4-211ENST00000498367 UTP20O75691 2785 aaKnown RBP1.93□□□□□ -2.1
PDCD4-211ENST00000498367 UNC79Q9P2D8 2635 aa1.92□□□□□ -2.1
PDCD4-211ENST00000498367 TACC2O95359 2948 aa1.91□□□□□ -2.1
PDCD4-211ENST00000498367 FAT2Q9NYQ8 4349 aa1.91□□□□□ -2.1
PDCD4-211ENST00000498367 PRUNE2Q8WUY3 3088 aa1.9□□□□□ -2.11
PDCD4-211ENST00000498367 ACANP16112 2415 aa1.9□□□□□ -2.11
PDCD4-211ENST00000498367 SETXQ7Z333 2677 aaKnown RBP1.9□□□□□ -2.11
PDCD4-211ENST00000498367 DNAH3Q8TD57 4116 aa1.89□□□□□ -2.11
PDCD4-211ENST00000498367 DYNC2H1Q8NCM8 4307 aaKnown RBP1.88□□□□□ -2.11
PDCD4-211ENST00000498367 CELSR3Q9NYQ7 3312 aa1.88□□□□□ -2.11
PDCD4-211ENST00000498367 ATMQ13315 3056 aa1.88□□□□□ -2.11
PDCD4-211ENST00000498367 DNAH8Q96JB1 4490 aa1.88□□□□□ -2.11
PDCD4-211ENST00000498367 CEP350Q5VT06 3117 aa1.88□□□□□ -2.11
PDCD4-211ENST00000498367 DMXL2Q8TDJ6 3036 aa1.88□□□□□ -2.11
PDCD4-211ENST00000498367 NBEAQ8NFP9 2946 aa1.87□□□□□ -2.11
PDCD4-211ENST00000498367 PKD1L1Q8TDX9 2849 aa1.87□□□□□ -2.11
PDCD4-211ENST00000498367 TRIOO75962 3097 aa1.86□□□□□ -2.11
PDCD4-211ENST00000498367 C5orf42Q9H799 3197 aa1.86□□□□□ -2.11
PDCD4-211ENST00000498367 DMXL1Q9Y485 3027 aa1.85□□□□□ -2.11
PDCD4-211ENST00000498367 CD52P31358 61 aa1.85□□□□□ -2.11
PDCD4-211ENST00000498367 STAB1Q9NY15 2570 aa1.85□□□□□ -2.11
PDCD4-211ENST00000498367 SPG11Q96JI7 2443 aa1.84□□□□□ -2.11
PDCD4-211ENST00000498367 FBN3Q75N90 2809 aa1.84□□□□□ -2.12
PDCD4-211ENST00000498367 LRBAP50851 2863 aa1.84□□□□□ -2.12
PDCD4-211ENST00000498367 NIPBLQ6KC79 2804 aaeCLIP1.83□□□□□ -2.12
PDCD4-211ENST00000498367 LAMA5O15230 3695 aa1.83□□□□□ -2.12
PDCD4-211ENST00000498367 SZT2Q5T011 3432 aa1.82□□□□□ -2.12
PDCD4-211ENST00000498367 MAP1AP78559 2803 aaPredicted RBP1.82□□□□□ -2.12
PDCD4-211ENST00000498367 ANKRD11Q6UB99 2663 aaPredicted RBP1.82□□□□□ -2.12
PDCD4-211ENST00000498367 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
PDCD4-211ENST00000498367 ITPR1Q14643 2758 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms