RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 APCP25054 2843 aa8.86□□□□□ -0.99
C4A-259ENST00000498271 PANO1I0J062 215 aa8.85□□□□□ -0.99
C4A-259ENST00000498271 ASH1LQ9NR48 2969 aaKnown RBP8.84□□□□□ -0.99
C4A-259ENST00000498271 R4GN34 69 aa8.79□□□□□ -1
C4A-259ENST00000498271 NSD1Q96L73 2696 aaPredicted RBP8.78□□□□□ -1
C4A-259ENST00000498271 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
C4A-259ENST00000498271 KRTAP10-2P60368 255 aa8.76□□□□□ -1.01
C4A-259ENST00000498271 HIVEP1P15822 2718 aa8.76□□□□□ -1.01
C4A-259ENST00000498271 WDFY3Q8IZQ1 3526 aa8.75□□□□□ -1.01
C4A-259ENST00000498271 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
C4A-259ENST00000498271 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
C4A-259ENST00000498271 CELSR2Q9HCU4 2923 aa8.7□□□□□ -1.02
C4A-259ENST00000498271 NIPBLQ6KC79 2804 aaeCLIP8.7□□□□□ -1.02
C4A-259ENST00000498271 ADM2Q7Z4H4 148 aa8.68□□□□□ -1.02
C4A-259ENST00000498271 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
C4A-259ENST00000498271 KMT2BQ9UMN6 2715 aaPredicted RBP8.68□□□□□ -1.02
C4A-259ENST00000498271 A8MU10 97 aa8.67□□□□□ -1.02
C4A-259ENST00000498271 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
C4A-259ENST00000498271 RELNP78509 3460 aa8.66□□□□□ -1.02
C4A-259ENST00000498271 CRYBG3Q68DQ2 2970 aa8.64□□□□□ -1.03
C4A-259ENST00000498271 FBN2P35556 2912 aa8.64□□□□□ -1.03
C4A-259ENST00000498271 STAB2Q8WWQ8 2551 aa8.63□□□□□ -1.03
C4A-259ENST00000498271 M0QZ58 72 aa8.62□□□□□ -1.03
C4A-259ENST00000498271 ZFHX4Q86UP3 3567 aa8.62□□□□□ -1.03
C4A-259ENST00000498271 DCHS2Q6V1P9 2916 aa8.61□□□□□ -1.03
C4A-259ENST00000498271 NF1P21359 2839 aa8.6□□□□□ -1.03
C4A-259ENST00000498271 FLG2Q5D862 2391 aaPredicted RBP8.6□□□□□ -1.03
C4A-259ENST00000498271 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
C4A-259ENST00000498271 DMDP11532 3685 aa8.58□□□□□ -1.04
C4A-259ENST00000498271 ASPMQ8IZT6 3477 aa8.58□□□□□ -1.04
C4A-259ENST00000498271 LAMA5O15230 3695 aa8.58□□□□□ -1.04
C4A-259ENST00000498271 KRTAP13-1Q8IUC0 172 aa8.56□□□□□ -1.04
C4A-259ENST00000498271 NDUFAF8A1L188 74 aa8.55□□□□□ -1.04
C4A-259ENST00000498271 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
C4A-259ENST00000498271 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
C4A-259ENST00000498271 DCHS1Q96JQ0 3298 aa8.53□□□□□ -1.04
C4A-259ENST00000498271 MUC3AQ02505 3323 aa8.52□□□□□ -1.04
C4A-259ENST00000498271 MXRA5Q9NR99 2828 aa8.51□□□□□ -1.05
C4A-259ENST00000498271 A8MUU9 505 aa8.45□□□□□ -1.06
C4A-259ENST00000498271 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
C4A-259ENST00000498271 SMG1Q96Q15 3661 aaKnown RBP8.37□□□□□ -1.07
C4A-259ENST00000498271 TENM4Q6N022 2769 aa8.34□□□□□ -1.07
C4A-259ENST00000498271 CSMD1Q96PZ7 3565 aa8.33□□□□□ -1.08
C4A-259ENST00000498271 C20orf166-AS1Q96NR2 134 aa8.28□□□□□ -1.08
C4A-259ENST00000498271 CELSR1Q9NYQ6 3014 aa8.27□□□□□ -1.09
C4A-259ENST00000498271 PP632Q6XCG6 107 aa8.21□□□□□ -1.1
C4A-259ENST00000498271 TENM3Q9P273 2699 aa8.2□□□□□ -1.1
C4A-259ENST00000498271 PDZD2O15018 2839 aa8.17□□□□□ -1.1
C4A-259ENST00000498271 H0YAA0 97 aa8.16□□□□□ -1.1
C4A-259ENST00000498271 SVEP1Q4LDE5 3571 aa8.14□□□□□ -1.11
C4A-259ENST00000498271 TNP1P09430 55 aa8.13□□□□□ -1.11
C4A-259ENST00000498271 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
C4A-259ENST00000498271 KRTAP1-4P0C5Y4 121 aa8.1□□□□□ -1.11
C4A-259ENST00000498271 P0C880 135 aa8.09□□□□□ -1.11
C4A-259ENST00000498271 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
C4A-259ENST00000498271 NBPF19A0A087WUL8 3843 aa8.05□□□□□ -1.12
C4A-259ENST00000498271 SPENQ96T58 3664 aaKnown RBP8.03□□□□□ -1.12
C4A-259ENST00000498271 VWFP04275 2813 aa7.99□□□□□ -1.13
C4A-259ENST00000498271 BSNQ9UPA5 3926 aa7.98□□□□□ -1.13
C4A-259ENST00000498271 OTOGQ6ZRI0 2925 aa7.97□□□□□ -1.13
C4A-259ENST00000498271 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
C4A-259ENST00000498271 ANK3Q12955 4377 aaKnown RBP7.89□□□□□ -1.15
C4A-259ENST00000498271 FBN1P35555 2871 aaKnown RBP7.89□□□□□ -1.15
C4A-259ENST00000498271 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
C4A-259ENST00000498271 TENM2Q9NT68 2774 aa7.87□□□□□ -1.15
C4A-259ENST00000498271 CSMD2Q7Z408 3487 aa7.86□□□□□ -1.15
C4A-259ENST00000498271 CUBNO60494 3623 aa7.86□□□□□ -1.15
C4A-259ENST00000498271 XP32Q5T750 250 aa7.8□□□□□ -1.16
C4A-259ENST00000498271 TGP01266 2768 aa7.79□□□□□ -1.16
C4A-259ENST00000498271 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
C4A-259ENST00000498271 ZFHX3Q15911 3703 aa7.77□□□□□ -1.17
C4A-259ENST00000498271 PKD1L1Q8TDX9 2849 aa7.76□□□□□ -1.17
C4A-259ENST00000498271 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
C4A-259ENST00000498271 TRRAPQ9Y4A5 3859 aa7.67□□□□□ -1.18
C4A-259ENST00000498271 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
C4A-259ENST00000498271 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
C4A-259ENST00000498271 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
C4A-259ENST00000498271 VPS13CQ709C8 3753 aa7.52□□□□□ -1.21
C4A-259ENST00000498271 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
C4A-259ENST00000498271 FBN3Q75N90 2809 aa7.46□□□□□ -1.22
C4A-259ENST00000498271 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
C4A-259ENST00000498271 MEGF8Q7Z7M0 2845 aa7.38□□□□□ -1.23
C4A-259ENST00000498271 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
C4A-259ENST00000498271 SRRM2Q9UQ35 2752 aaKnown RBP7.36□□□□□ -1.23
C4A-259ENST00000498271 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
C4A-259ENST00000498271 ZNF469Q96JG9 3925 aaPredicted RBP7.33□□□□□ -1.24
C4A-259ENST00000498271 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
C4A-259ENST00000498271 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
C4A-259ENST00000498271 AKAP9Q99996 3911 aa7.23□□□□□ -1.25
C4A-259ENST00000498271 INE1O15225 51 aa7.18□□□□□ -1.26
C4A-259ENST00000498271 COL7A1Q02388 2944 aa7.15□□□□□ -1.27
C4A-259ENST00000498271 KRTAP10-4P60372 401 aaPredicted RBP7.05□□□□□ -1.28
C4A-259ENST00000498271 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
C4A-259ENST00000498271 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
C4A-259ENST00000498271 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
C4A-259ENST00000498271 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.29
C4A-259ENST00000498271 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
C4A-259ENST00000498271 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
C4A-259ENST00000498271 ALMS1Q8TCU4 4167 aa6.89□□□□□ -1.31
C4A-259ENST00000498271 DNAH1Q9P2D7 4330 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms