RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 MT1AP04731 61 aa-0.58□□□□□ -2.5
CLTC-208ENST00000496076 ANKRD36CQ5JPF3 1778 aa-0.58□□□□□ -2.5
CLTC-208ENST00000496076 PDCD5O14737 125 aa-0.59□□□□□ -2.5
CLTC-208ENST00000496076 INO80Q9ULG1 1556 aaPredicted RBP-0.59□□□□□ -2.5
CLTC-208ENST00000496076 NHSQ6T4R5 1651 aa-0.59□□□□□ -2.5
CLTC-208ENST00000496076 GCN1Q92616 2671 aaKnown RBP-0.61□□□□□ -2.51
CLTC-208ENST00000496076 WT1-ASQ06250 92 aa-0.61□□□□□ -2.51
CLTC-208ENST00000496076 ABCA9Q8IUA7 1624 aa-0.61□□□□□ -2.51
CLTC-208ENST00000496076 ITSN2Q9NZM3 1697 aa-0.62□□□□□ -2.51
CLTC-208ENST00000496076 ASXL1Q8IXJ9 1541 aa-0.62□□□□□ -2.51
CLTC-208ENST00000496076 DNAH6Q9C0G6 4158 aa-0.62□□□□□ -2.51
CLTC-208ENST00000496076 TACC2O95359 2948 aa-0.62□□□□□ -2.51
CLTC-208ENST00000496076 PKD1L2Q7Z442 2459 aa-0.62□□□□□ -2.51
CLTC-208ENST00000496076 NIPBLQ6KC79 2804 aaeCLIP-0.63□□□□□ -2.51
CLTC-208ENST00000496076 RPS27P42677 84 aaKnown RBP-0.63□□□□□ -2.51
CLTC-208ENST00000496076 RPS27LQ71UM5 84 aaKnown RBP-0.63□□□□□ -2.51
CLTC-208ENST00000496076 ANK3Q12955 4377 aaKnown RBP-0.64□□□□□ -2.51
CLTC-208ENST00000496076 ABCC6O95255 1503 aa-0.64□□□□□ -2.51
CLTC-208ENST00000496076 ANKRD11Q6UB99 2663 aaPredicted RBP-0.64□□□□□ -2.51
CLTC-208ENST00000496076 CEP290O15078 2479 aa-0.64□□□□□ -2.51
CLTC-208ENST00000496076 RYR1P21817 5038 aa-0.64□□□□□ -2.51
CLTC-208ENST00000496076 DEFB110Q30KQ9 67 aa-0.64□□□□□ -2.51
CLTC-208ENST00000496076 MTORP42345 2549 aa-0.64□□□□□ -2.51
CLTC-208ENST00000496076 STARD9Q9P2P6 4700 aa-0.64□□□□□ -2.51
CLTC-208ENST00000496076 PKHD1L1Q86WI1 4243 aa-0.64□□□□□ -2.51
CLTC-208ENST00000496076 FCER1GP30273 86 aa-0.65□□□□□ -2.51
CLTC-208ENST00000496076 DEFB114Q30KQ6 69 aa-0.65□□□□□ -2.51
CLTC-208ENST00000496076 C6orf48Q9UBA6 75 aa-0.65□□□□□ -2.51
CLTC-208ENST00000496076 UBR4Q5T4S7 5183 aa-0.65□□□□□ -2.51
CLTC-208ENST00000496076 USH2AO75445 5202 aa-0.65□□□□□ -2.51
CLTC-208ENST00000496076 KIF1AQ12756 1690 aa-0.65□□□□□ -2.51
CLTC-208ENST00000496076 APOBP04114 4563 aaKnown RBP-0.66□□□□□ -2.51
CLTC-208ENST00000496076 CCDC168Q8NDH2 2452 aa-0.66□□□□□ -2.51
CLTC-208ENST00000496076 NCBP2-AS2Q69YL0 99 aa-0.66□□□□□ -2.52
CLTC-208ENST00000496076 VPS13BQ7Z7G8 4022 aa-0.66□□□□□ -2.52
CLTC-208ENST00000496076 KIAA1109Q2LD37 5005 aa-0.66□□□□□ -2.52
CLTC-208ENST00000496076 AKAP9Q99996 3911 aa-0.66□□□□□ -2.52
CLTC-208ENST00000496076 TEX15Q9BXT5 2789 aa-0.67□□□□□ -2.52
CLTC-208ENST00000496076 C3P01024 1663 aa-0.67□□□□□ -2.52
CLTC-208ENST00000496076 SFTA3P0C7M3 94 aa-0.67□□□□□ -2.52
CLTC-208ENST00000496076 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.67□□□□□ -2.52
CLTC-208ENST00000496076 DNMBPQ6XZF7 1577 aa-0.67□□□□□ -2.52
CLTC-208ENST00000496076 DNAH3Q8TD57 4116 aa-0.67□□□□□ -2.52
CLTC-208ENST00000496076 VPS13DQ5THJ4 4388 aa-0.68□□□□□ -2.52
CLTC-208ENST00000496076 KALRNO60229 2985 aa-0.68□□□□□ -2.52
CLTC-208ENST00000496076 LRRK2Q5S007 2527 aa-0.68□□□□□ -2.52
CLTC-208ENST00000496076 TOGARAM1Q9Y4F4 1720 aa-0.69□□□□□ -2.52
CLTC-208ENST00000496076 EPPK1P58107 5090 aaKnown RBP-0.69□□□□□ -2.52
CLTC-208ENST00000496076 LINC01549A6NIU2 74 aa-0.69□□□□□ -2.52
CLTC-208ENST00000496076 LAMA2P24043 3122 aaKnown RBP-0.69□□□□□ -2.52
CLTC-208ENST00000496076 FAM186AA6NE01 2351 aa-0.7□□□□□ -2.52
CLTC-208ENST00000496076 BPTFQ12830 3046 aa-0.7□□□□□ -2.52
CLTC-208ENST00000496076 MGAM2Q2M2H8 2515 aa-0.71□□□□□ -2.52
CLTC-208ENST00000496076 MROH1Q8NDA8 1641 aa-0.71□□□□□ -2.52
CLTC-208ENST00000496076 DNAH11Q96DT5 4516 aa-0.72□□□□□ -2.52
CLTC-208ENST00000496076 UTP20O75691 2785 aaKnown RBP-0.72□□□□□ -2.52
CLTC-208ENST00000496076 WDR87Q6ZQQ6 2873 aa-0.72□□□□□ -2.52
CLTC-208ENST00000496076 MUC17Q685J3 4493 aa-0.73□□□□□ -2.53
CLTC-208ENST00000496076 MADDQ8WXG6 1647 aa-0.74□□□□□ -2.53
CLTC-208ENST00000496076 BIRC6Q9NR09 4857 aa-0.75□□□□□ -2.53
CLTC-208ENST00000496076 RYR2Q92736 4967 aa-0.75□□□□□ -2.53
CLTC-208ENST00000496076 IGLV5-48A0A075B6I7 105 aa-0.75□□□□□ -2.53
CLTC-208ENST00000496076 H3BUA1 57 aa-0.75□□□□□ -2.53
CLTC-208ENST00000496076 SACSQ9NZJ4 4579 aa-0.75□□□□□ -2.53
CLTC-208ENST00000496076 LAMA1P25391 3075 aa-0.76□□□□□ -2.53
CLTC-208ENST00000496076 PLECQ15149 4684 aaKnown RBP-0.76□□□□□ -2.53
CLTC-208ENST00000496076 CEP295Q9C0D2 2601 aa-0.77□□□□□ -2.53
CLTC-208ENST00000496076 NBEAQ8NFP9 2946 aa-0.77□□□□□ -2.53
CLTC-208ENST00000496076 DNAH2Q9P225 4427 aa-0.78□□□□□ -2.53
CLTC-208ENST00000496076 ITPR1Q14643 2758 aa-0.79□□□□□ -2.54
CLTC-208ENST00000496076 EFCAB5A4FU69 1503 aa-0.79□□□□□ -2.54
CLTC-208ENST00000496076 M0R1W7 72 aa-0.79□□□□□ -2.54
CLTC-208ENST00000496076 TRIOO75962 3097 aa-0.79□□□□□ -2.54
CLTC-208ENST00000496076 MYO9AB2RTY4 2548 aa-0.8□□□□□ -2.54
CLTC-208ENST00000496076 ACACBO00763 2458 aa-0.8□□□□□ -2.54
CLTC-208ENST00000496076 K7EMI3 77 aa-0.8□□□□□ -2.54
CLTC-208ENST00000496076 NBEAL2Q6ZNJ1 2754 aa-0.81□□□□□ -2.54
CLTC-208ENST00000496076 MMP24-AS1A0A0U1RRL7 71 aa-0.81□□□□□ -2.54
CLTC-208ENST00000496076 CLASP1Q7Z460 1538 aa-0.81□□□□□ -2.54
CLTC-208ENST00000496076 LY75O60449 1722 aa-0.81□□□□□ -2.54
CLTC-208ENST00000496076 CFAP46Q8IYW2 2715 aa-0.81□□□□□ -2.54
CLTC-208ENST00000496076 RANBP2P49792 3224 aaKnown RBP-0.82□□□□□ -2.54
CLTC-208ENST00000496076 NOP10Q9NPE3 64 aaKnown RBP-0.82□□□□□ -2.54
CLTC-208ENST00000496076 COL6A5A8TX70 2615 aa-0.82□□□□□ -2.54
CLTC-208ENST00000496076 TNP1P09430 55 aa-0.84□□□□□ -2.54
CLTC-208ENST00000496076 CDC42BPAQ5VT25 1732 aa-0.84□□□□□ -2.54
CLTC-208ENST00000496076 DNHD1Q96M86 4753 aa-0.84□□□□□ -2.54
CLTC-208ENST00000496076 CROCC2H7BZ55 1655 aa-0.84□□□□□ -2.54
CLTC-208ENST00000496076 DNAH7Q8WXX0 4024 aa-0.85□□□□□ -2.55
CLTC-208ENST00000496076 LAMA3Q16787 3333 aa-0.86□□□□□ -2.55
CLTC-208ENST00000496076 ABCA6Q8N139 1617 aa-0.86□□□□□ -2.55
CLTC-208ENST00000496076 CCDC180Q9P1Z9 1646 aa-0.86□□□□□ -2.55
CLTC-208ENST00000496076 CMYA5Q8N3K9 4069 aa-0.86□□□□□ -2.55
CLTC-208ENST00000496076 TIAM1Q13009 1591 aa-0.86□□□□□ -2.55
CLTC-208ENST00000496076 SPTAN1Q13813 2472 aaKnown RBP-0.86□□□□□ -2.55
CLTC-208ENST00000496076 TLN2Q9Y4G6 2542 aa-0.86□□□□□ -2.55
CLTC-208ENST00000496076 RNF213Q63HN8 5207 aa-0.86□□□□□ -2.55
CLTC-208ENST00000496076 A0A087WWC5 75 aa-0.87□□□□□ -2.55
CLTC-208ENST00000496076 NMES1Q9C002 83 aa-0.87□□□□□ -2.55
CLTC-208ENST00000496076 DNAH1Q9P2D7 4330 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms