RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
GPC1-209ENST00000495100 DNHD1Q96M86 4753 aa8□□□□□ -1.13
GPC1-209ENST00000495100 CMYA5Q8N3K9 4069 aa7.98□□□□□ -1.13
GPC1-209ENST00000495100 LINC00313P59037 77 aa7.98□□□□□ -1.13
GPC1-209ENST00000495100 Q5W150 140 aa7.98□□□□□ -1.13
GPC1-209ENST00000495100 SPRR1BP22528 89 aa7.97□□□□□ -1.13
GPC1-209ENST00000495100 C9orf92A6NGG3 77 aa7.96□□□□□ -1.13
GPC1-209ENST00000495100 Q96NJ1 140 aa7.95□□□□□ -1.14
GPC1-209ENST00000495100 KRTAP10-1P60331 282 aa7.94□□□□□ -1.14
GPC1-209ENST00000495100 TP53AIP1Q9HCN2 124 aa7.94□□□□□ -1.14
GPC1-209ENST00000495100 KMT2AQ03164 3969 aa7.93□□□□□ -1.14
GPC1-209ENST00000495100 PRKDCP78527 4128 aaKnown RBP7.92□□□□□ -1.14
GPC1-209ENST00000495100 TYMSOSQ8TAI1 123 aa7.92□□□□□ -1.14
GPC1-209ENST00000495100 KRTAP13-1Q8IUC0 172 aa7.92□□□□□ -1.14
GPC1-209ENST00000495100 STARD9Q9P2P6 4700 aa7.92□□□□□ -1.14
GPC1-209ENST00000495100 Q8N1X5 172 aa7.91□□□□□ -1.14
GPC1-209ENST00000495100 Q5VV11 94 aa7.91□□□□□ -1.14
GPC1-209ENST00000495100 PLAC8Q9NZF1 115 aa7.91□□□□□ -1.14
GPC1-209ENST00000495100 LIMD2Q9BT23 127 aa7.9□□□□□ -1.14
GPC1-209ENST00000495100 CYP4F30PQ9H0H9 118 aa7.9□□□□□ -1.15
GPC1-209ENST00000495100 HRES1P13985 223 aa7.89□□□□□ -1.15
GPC1-209ENST00000495100 Q1T7F1 81 aa7.89□□□□□ -1.15
GPC1-209ENST00000495100 FRAS1Q86XX4 4008 aa7.88□□□□□ -1.15
GPC1-209ENST00000495100 C7orf65Q6ZTY9 151 aa7.87□□□□□ -1.15
GPC1-209ENST00000495100 Q6ZR54 194 aa7.87□□□□□ -1.15
GPC1-209ENST00000495100 LCE6AA0A183 80 aa7.86□□□□□ -1.15
GPC1-209ENST00000495100 H3BPC8 53 aa7.86□□□□□ -1.15
GPC1-209ENST00000495100 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
GPC1-209ENST00000495100 SPINK7P58062 85 aa7.86□□□□□ -1.15
GPC1-209ENST00000495100 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
GPC1-209ENST00000495100 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
GPC1-209ENST00000495100 SPANXA2-OT1Q8N9U9 137 aa7.82□□□□□ -1.16
GPC1-209ENST00000495100 ACYP2P14621 99 aa7.81□□□□□ -1.16
GPC1-209ENST00000495100 A0A1B0GU69 56 aa7.81□□□□□ -1.16
GPC1-209ENST00000495100 DNAH1Q9P2D7 4330 aa7.79□□□□□ -1.16
GPC1-209ENST00000495100 SSBP3-AS1Q7Z2R9 100 aa7.79□□□□□ -1.16
GPC1-209ENST00000495100 KRTAP13-2Q52LG2 175 aa7.79□□□□□ -1.16
GPC1-209ENST00000495100 LINC00483Q53H64 154 aa7.79□□□□□ -1.16
GPC1-209ENST00000495100 LCA10Q71F78 164 aa7.78□□□□□ -1.16
GPC1-209ENST00000495100 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
GPC1-209ENST00000495100 DNAH8Q96JB1 4490 aa7.75□□□□□ -1.17
GPC1-209ENST00000495100 ATP11AUNQ6ZP68 121 aa7.71□□□□□ -1.17
GPC1-209ENST00000495100 DNAH3Q8TD57 4116 aa7.71□□□□□ -1.18
GPC1-209ENST00000495100 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.18
GPC1-209ENST00000495100 PRAC1Q96KF2 57 aa7.71□□□□□ -1.18
GPC1-209ENST00000495100 DNAH6Q9C0G6 4158 aa7.69□□□□□ -1.18
GPC1-209ENST00000495100 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
GPC1-209ENST00000495100 VPS13DQ5THJ4 4388 aa7.65□□□□□ -1.18
GPC1-209ENST00000495100 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
GPC1-209ENST00000495100 Q75L30 129 aa7.63□□□□□ -1.19
GPC1-209ENST00000495100 LRP1BQ9NZR2 4599 aa7.63□□□□□ -1.19
GPC1-209ENST00000495100 LINC01558Q9Y6Z2 57 aa7.62□□□□□ -1.19
GPC1-209ENST00000495100 DNAH2Q9P225 4427 aa7.61□□□□□ -1.19
GPC1-209ENST00000495100 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
GPC1-209ENST00000495100 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
GPC1-209ENST00000495100 FAT1Q14517 4588 aa7.58□□□□□ -1.2
GPC1-209ENST00000495100 RBM12B-AS1Q9P1G2 102 aa7.58□□□□□ -1.2
GPC1-209ENST00000495100 MIR22HGQ0VDD5 57 aa7.57□□□□□ -1.2
GPC1-209ENST00000495100 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
GPC1-209ENST00000495100 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
GPC1-209ENST00000495100 H3BS24 57 aa7.54□□□□□ -1.2
GPC1-209ENST00000495100 ASB16-AS1Q495Z4 193 aa7.54□□□□□ -1.2
GPC1-209ENST00000495100 KTN1-AS1Q86SY8 53 aa7.54□□□□□ -1.2
GPC1-209ENST00000495100 UQCR11O14957 56 aa7.53□□□□□ -1.2
GPC1-209ENST00000495100 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
GPC1-209ENST00000495100 HECTD4Q9Y4D8 3996 aa7.51□□□□□ -1.21
GPC1-209ENST00000495100 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
GPC1-209ENST00000495100 A0A0D9SG42 100 aa7.48□□□□□ -1.21
GPC1-209ENST00000495100 DNAH5Q8TE73 4624 aa7.46□□□□□ -1.21
GPC1-209ENST00000495100 MYCBP2O75592 4640 aa7.46□□□□□ -1.22
GPC1-209ENST00000495100 PKHD1P08F94 4074 aa7.43□□□□□ -1.22
GPC1-209ENST00000495100 SPATA8Q6RVD6 105 aa7.43□□□□□ -1.22
GPC1-209ENST00000495100 Q6ZSA8 131 aa7.42□□□□□ -1.22
GPC1-209ENST00000495100 VPS13BQ7Z7G8 4022 aa7.41□□□□□ -1.22
GPC1-209ENST00000495100 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.22
GPC1-209ENST00000495100 A6NN06 94 aa7.39□□□□□ -1.23
GPC1-209ENST00000495100 KRTAP16-1A8MUX0 517 aa7.39□□□□□ -1.23
GPC1-209ENST00000495100 CSAG1Q6PB30 78 aa7.34□□□□□ -1.23
GPC1-209ENST00000495100 DYNC2H1Q8NCM8 4307 aaKnown RBP7.32□□□□□ -1.24
GPC1-209ENST00000495100 FAT2Q9NYQ8 4349 aa7.32□□□□□ -1.24
GPC1-209ENST00000495100 A0A1B0GU33 70 aa7.3□□□□□ -1.24
GPC1-209ENST00000495100 Q5VSD8 79 aa7.28□□□□□ -1.24
GPC1-209ENST00000495100 FAT3Q8TDW7 4589 aa7.27□□□□□ -1.25
GPC1-209ENST00000495100 K7ERS5 55 aa7.26□□□□□ -1.25
GPC1-209ENST00000495100 LRP1Q07954 4544 aaKnown RBP7.26□□□□□ -1.25
GPC1-209ENST00000495100 DYNC1H1Q14204 4646 aaKnown RBP7.25□□□□□ -1.25
GPC1-209ENST00000495100 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
GPC1-209ENST00000495100 ALMS1Q8TCU4 4167 aa7.24□□□□□ -1.25
GPC1-209ENST00000495100 KMT2CQ8NEZ4 4911 aaKnown RBP7.2□□□□□ -1.26
GPC1-209ENST00000495100 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
GPC1-209ENST00000495100 H0YAA0 97 aa7.14□□□□□ -1.27
GPC1-209ENST00000495100 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
GPC1-209ENST00000495100 KIAA1109Q2LD37 5005 aa7.12□□□□□ -1.27
GPC1-209ENST00000495100 COX6B2Q6YFQ2 88 aa7.11□□□□□ -1.27
GPC1-209ENST00000495100 APOBP04114 4563 aaKnown RBP7.11□□□□□ -1.27
GPC1-209ENST00000495100 H1FX-AS1Q4G0G2 97 aa7.11□□□□□ -1.27
GPC1-209ENST00000495100 A8MUU9 505 aa7.1□□□□□ -1.27
GPC1-209ENST00000495100 SACSQ9NZJ4 4579 aa7.09□□□□□ -1.27
GPC1-209ENST00000495100 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
GPC1-209ENST00000495100 S4R3F8 94 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms