RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 Q75L30 129 aa7.38□□□□□ -1.23
HSPG2-211ENST00000486901 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
HSPG2-211ENST00000486901 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
HSPG2-211ENST00000486901 IGLV5-52A0A0A0MRZ9 124 aa7.37□□□□□ -1.23
HSPG2-211ENST00000486901 KMT2AQ03164 3969 aa7.37□□□□□ -1.23
HSPG2-211ENST00000486901 PRAC1Q96KF2 57 aa7.36□□□□□ -1.23
HSPG2-211ENST00000486901 FLG2Q5D862 2391 aaPredicted RBP7.36□□□□□ -1.23
HSPG2-211ENST00000486901 KRTAP13-1Q8IUC0 172 aa7.36□□□□□ -1.23
HSPG2-211ENST00000486901 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
HSPG2-211ENST00000486901 KTN1-AS1Q86SY8 53 aa7.35□□□□□ -1.23
HSPG2-211ENST00000486901 DNAH8Q96JB1 4490 aa7.35□□□□□ -1.23
HSPG2-211ENST00000486901 WWC2-AS2Q96NR7 200 aa7.35□□□□□ -1.23
HSPG2-211ENST00000486901 NUPR2A6NF83 97 aa7.34□□□□□ -1.24
HSPG2-211ENST00000486901 ATP11AUNQ6ZP68 121 aa7.33□□□□□ -1.24
HSPG2-211ENST00000486901 ADM2Q7Z4H4 148 aa7.33□□□□□ -1.24
HSPG2-211ENST00000486901 TP53AIP1Q9HCN2 124 aa7.33□□□□□ -1.24
HSPG2-211ENST00000486901 CDC42SE1Q9NRR8 79 aa7.32□□□□□ -1.24
HSPG2-211ENST00000486901 STARD9Q9P2P6 4700 aa7.32□□□□□ -1.24
HSPG2-211ENST00000486901 SPACA4Q8TDM5 124 aa7.32□□□□□ -1.24
HSPG2-211ENST00000486901 RTL8CO15255 209 aa7.31□□□□□ -1.24
HSPG2-211ENST00000486901 C1orf134Q5TEV5 83 aa7.31□□□□□ -1.24
HSPG2-211ENST00000486901 A6NN06 94 aa7.3□□□□□ -1.24
HSPG2-211ENST00000486901 LINC01558Q9Y6Z2 57 aa7.3□□□□□ -1.24
HSPG2-211ENST00000486901 Q6ZR54 194 aa7.3□□□□□ -1.24
HSPG2-211ENST00000486901 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
HSPG2-211ENST00000486901 A0A087WTM6 91 aa7.28□□□□□ -1.24
HSPG2-211ENST00000486901 DNAH17Q9UFH2 4485 aa7.27□□□□□ -1.25
HSPG2-211ENST00000486901 SMR3BP02814 79 aaPredicted RBP7.26□□□□□ -1.25
HSPG2-211ENST00000486901 ZNF861PO60384 105 aa7.25□□□□□ -1.25
HSPG2-211ENST00000486901 SPINK1P00995 79 aa7.25□□□□□ -1.25
HSPG2-211ENST00000486901 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
HSPG2-211ENST00000486901 IGKV2D-30A0A075B6S6 120 aa7.25□□□□□ -1.25
HSPG2-211ENST00000486901 IGKV2-30P06310 120 aa7.25□□□□□ -1.25
HSPG2-211ENST00000486901 DNAH6Q9C0G6 4158 aa7.23□□□□□ -1.25
HSPG2-211ENST00000486901 HECTD4Q9Y4D8 3996 aa7.23□□□□□ -1.25
HSPG2-211ENST00000486901 PRKDCP78527 4128 aaKnown RBP7.21□□□□□ -1.25
HSPG2-211ENST00000486901 ZNF706Q9Y5V0 76 aaPredicted RBP7.21□□□□□ -1.26
HSPG2-211ENST00000486901 DNAH2Q9P225 4427 aa7.21□□□□□ -1.26
HSPG2-211ENST00000486901 LINC00313P59037 77 aa7.2□□□□□ -1.26
HSPG2-211ENST00000486901 LINC00483Q53H64 154 aa7.2□□□□□ -1.26
HSPG2-211ENST00000486901 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
HSPG2-211ENST00000486901 PLAC8Q9NZF1 115 aa7.19□□□□□ -1.26
HSPG2-211ENST00000486901 ACYP2P14621 99 aa7.19□□□□□ -1.26
HSPG2-211ENST00000486901 A0A1B0GU69 56 aa7.18□□□□□ -1.26
HSPG2-211ENST00000486901 DNAH11Q96DT5 4516 aa7.18□□□□□ -1.26
HSPG2-211ENST00000486901 VPS13DQ5THJ4 4388 aa7.18□□□□□ -1.26
HSPG2-211ENST00000486901 IGLV7-43P04211 117 aa7.16□□□□□ -1.26
HSPG2-211ENST00000486901 KRTAP10-2P60368 255 aa7.13□□□□□ -1.27
HSPG2-211ENST00000486901 Q8N1X5 172 aa7.13□□□□□ -1.27
HSPG2-211ENST00000486901 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
HSPG2-211ENST00000486901 LRP1BQ9NZR2 4599 aa7.09□□□□□ -1.27
HSPG2-211ENST00000486901 H3BS24 57 aa7.08□□□□□ -1.28
HSPG2-211ENST00000486901 KRTAP13-2Q52LG2 175 aa7.07□□□□□ -1.28
HSPG2-211ENST00000486901 DMAC1Q96GE9 116 aa7.07□□□□□ -1.28
HSPG2-211ENST00000486901 ALMS1Q8TCU4 4167 aa7.06□□□□□ -1.28
HSPG2-211ENST00000486901 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
HSPG2-211ENST00000486901 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
HSPG2-211ENST00000486901 DNHD1Q96M86 4753 aa7.05□□□□□ -1.28
HSPG2-211ENST00000486901 PLA2G1BP04054 148 aaKnown RBP7.04□□□□□ -1.28
HSPG2-211ENST00000486901 DYNC2H1Q8NCM8 4307 aaKnown RBP7.01□□□□□ -1.29
HSPG2-211ENST00000486901 C8orf87E5RJ46 101 aa7□□□□□ -1.29
HSPG2-211ENST00000486901 UQCR11O14957 56 aa7□□□□□ -1.29
HSPG2-211ENST00000486901 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
HSPG2-211ENST00000486901 SSBP3-AS1Q7Z2R9 100 aa6.99□□□□□ -1.29
HSPG2-211ENST00000486901 C9orf92A6NGG3 77 aa6.98□□□□□ -1.29
HSPG2-211ENST00000486901 DNAH5Q8TE73 4624 aa6.98□□□□□ -1.29
HSPG2-211ENST00000486901 KRTAP10-1P60331 282 aa6.98□□□□□ -1.29
HSPG2-211ENST00000486901 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
HSPG2-211ENST00000486901 VPS13BQ7Z7G8 4022 aa6.95□□□□□ -1.3
HSPG2-211ENST00000486901 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
HSPG2-211ENST00000486901 FAT2Q9NYQ8 4349 aa6.95□□□□□ -1.3
HSPG2-211ENST00000486901 HYDINQ4G0P3 5121 aa6.95□□□□□ -1.3
HSPG2-211ENST00000486901 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
HSPG2-211ENST00000486901 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
HSPG2-211ENST00000486901 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
HSPG2-211ENST00000486901 KRTAP1-4P0C5Y4 121 aa6.87□□□□□ -1.31
HSPG2-211ENST00000486901 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
HSPG2-211ENST00000486901 FAT1Q14517 4588 aa6.83□□□□□ -1.32
HSPG2-211ENST00000486901 Q6ZSA8 131 aa6.8□□□□□ -1.32
HSPG2-211ENST00000486901 H0YAA0 97 aa6.79□□□□□ -1.32
HSPG2-211ENST00000486901 LINC00304Q8N9R0 145 aa6.75□□□□□ -1.33
HSPG2-211ENST00000486901 PKD1P98161 4303 aa6.73□□□□□ -1.33
HSPG2-211ENST00000486901 A0A1B0GU33 70 aa6.72□□□□□ -1.33
HSPG2-211ENST00000486901 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.34
HSPG2-211ENST00000486901 MYCBP2O75592 4640 aa6.71□□□□□ -1.34
HSPG2-211ENST00000486901 A0A0A0MQY5 61 aa6.69□□□□□ -1.34
HSPG2-211ENST00000486901 A0A0D9SG42 100 aa6.69□□□□□ -1.34
HSPG2-211ENST00000486901 A8MUU9 505 aa6.64□□□□□ -1.35
HSPG2-211ENST00000486901 H1FX-AS1Q4G0G2 97 aa6.62□□□□□ -1.35
HSPG2-211ENST00000486901 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
HSPG2-211ENST00000486901 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
HSPG2-211ENST00000486901 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
HSPG2-211ENST00000486901 COX6B2Q6YFQ2 88 aa6.57□□□□□ -1.36
HSPG2-211ENST00000486901 K7ERS5 55 aa6.52□□□□□ -1.37
HSPG2-211ENST00000486901 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
HSPG2-211ENST00000486901 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
HSPG2-211ENST00000486901 ROMO1P60602 79 aa6.5□□□□□ -1.37
HSPG2-211ENST00000486901 C20orf166-AS1Q96NR2 134 aa6.49□□□□□ -1.37
HSPG2-211ENST00000486901 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
HSPG2-211ENST00000486901 Q5VSD8 79 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms