RNA–Protein interactions for RNA: ENST00000485194.1

ATP13A3-208, Transcript of ATPase 13A3, humanhuman

TSL 5

Gene ATP13A3, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-208ENST00000485194 SMIM2Q9BVW6 85 aa0.34□□□□□ -2.36
ATP13A3-208ENST00000485194 DMXL1Q9Y485 3027 aa0.33□□□□□ -2.36
ATP13A3-208ENST00000485194 ACANP16112 2415 aa0.33□□□□□ -2.36
ATP13A3-208ENST00000485194 MAST4O15021 2626 aa0.33□□□□□ -2.36
ATP13A3-208ENST00000485194 KALRNO60229 2985 aa0.33□□□□□ -2.36
ATP13A3-208ENST00000485194 MAP1AP78559 2803 aaPredicted RBP0.33□□□□□ -2.36
ATP13A3-208ENST00000485194 TACC2O95359 2948 aa0.32□□□□□ -2.36
ATP13A3-208ENST00000485194 SYNE2Q8WXH0 6885 aaKnown RBP0.32□□□□□ -2.36
ATP13A3-208ENST00000485194 PRKDCP78527 4128 aaKnown RBP0.32□□□□□ -2.36
ATP13A3-208ENST00000485194 APC2O95996 2303 aa0.32□□□□□ -2.36
ATP13A3-208ENST00000485194 ATP7AQ04656 1500 aa0.32□□□□□ -2.36
ATP13A3-208ENST00000485194 LRRK2Q5S007 2527 aa0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 UTP20O75691 2785 aaKnown RBP0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 FLNAP21333 2647 aaKnown RBP0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 TRPM2O94759 1503 aa0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 BSNQ9UPA5 3926 aa0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 SETD2Q9BYW2 2564 aaPredicted RBP0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 CLTCL1P53675 1640 aa0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 ANKRD11Q6UB99 2663 aaPredicted RBP0.31□□□□□ -2.36
ATP13A3-208ENST00000485194 NDUFA1O15239 70 aa0.3□□□□□ -2.36
ATP13A3-208ENST00000485194 NBEAL2Q6ZNJ1 2754 aa0.3□□□□□ -2.36
ATP13A3-208ENST00000485194 TENM2Q9NT68 2774 aa0.3□□□□□ -2.36
ATP13A3-208ENST00000485194 FAT2Q9NYQ8 4349 aa0.3□□□□□ -2.36
ATP13A3-208ENST00000485194 SPTBN4Q9H254 2564 aa0.3□□□□□ -2.36
ATP13A3-208ENST00000485194 COL7A1Q02388 2944 aa0.29□□□□□ -2.36
ATP13A3-208ENST00000485194 SAMD9LQ8IVG5 1584 aa0.29□□□□□ -2.36
ATP13A3-208ENST00000485194 IGLV5-48A0A075B6I7 105 aa0.29□□□□□ -2.36
ATP13A3-208ENST00000485194 NOP10Q9NPE3 64 aaKnown RBP0.29□□□□□ -2.36
ATP13A3-208ENST00000485194 NBEAQ8NFP9 2946 aa0.28□□□□□ -2.36
ATP13A3-208ENST00000485194 MMP24-AS1A0A0U1RRL7 71 aa0.28□□□□□ -2.36
ATP13A3-208ENST00000485194 MTORP42345 2549 aa0.28□□□□□ -2.36
ATP13A3-208ENST00000485194 HUWE1Q7Z6Z7 4374 aaKnown RBP0.28□□□□□ -2.37
ATP13A3-208ENST00000485194 KMT2AQ03164 3969 aa0.28□□□□□ -2.37
ATP13A3-208ENST00000485194 WDR87Q6ZQQ6 2873 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 HTTP42858 3142 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 LYSTQ99698 3801 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 ANKHD1Q8IWZ3 2542 aaKnown RBP0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 HIVEP1P15822 2718 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 TGP01266 2768 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 H3BNG1 76 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 SPRR2DP22532 72 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 LRP1Q07954 4544 aaKnown RBP0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 FASNP49327 2511 aaKnown RBP0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 EPG5Q9HCE0 2579 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 SYNE1Q8NF91 8797 aaKnown RBP0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 FSIP2Q5CZC0 6907 aa0.27□□□□□ -2.37
ATP13A3-208ENST00000485194 SPG11Q96JI7 2443 aa0.26□□□□□ -2.37
ATP13A3-208ENST00000485194 DMBT1Q9UGM3 2413 aaPredicted RBP0.26□□□□□ -2.37
ATP13A3-208ENST00000485194 M0QY20 66 aa0.26□□□□□ -2.37
ATP13A3-208ENST00000485194 DEFB131AP59861 70 aa0.26□□□□□ -2.37
ATP13A3-208ENST00000485194 ACACAQ13085 2346 aa0.26□□□□□ -2.37
ATP13A3-208ENST00000485194 TEP1Q99973 2627 aaKnown RBP0.26□□□□□ -2.37
ATP13A3-208ENST00000485194 COL6A3P12111 3177 aa0.26□□□□□ -2.37
ATP13A3-208ENST00000485194 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
ATP13A3-208ENST00000485194 STAB1Q9NY15 2570 aa0.25□□□□□ -2.37
ATP13A3-208ENST00000485194 C9orf92A6NGG3 77 aa0.25□□□□□ -2.37
ATP13A3-208ENST00000485194 CRYBG3Q68DQ2 2970 aa0.25□□□□□ -2.37
ATP13A3-208ENST00000485194 CHD7Q9P2D1 2997 aa0.25□□□□□ -2.37
ATP13A3-208ENST00000485194 NBEAL1Q6ZS30 2694 aa0.25□□□□□ -2.37
ATP13A3-208ENST00000485194 USP9YO00507 2555 aaPredicted RBP0.24□□□□□ -2.37
ATP13A3-208ENST00000485194 COL6A5A8TX70 2615 aa0.24□□□□□ -2.37
ATP13A3-208ENST00000485194 COL12A1Q99715 3063 aa0.24□□□□□ -2.37
ATP13A3-208ENST00000485194 FAT4Q6V0I7 4981 aa0.24□□□□□ -2.37
ATP13A3-208ENST00000485194 MYO18BQ8IUG5 2567 aa0.23□□□□□ -2.37
ATP13A3-208ENST00000485194 FRYQ5TBA9 3013 aa0.23□□□□□ -2.37
ATP13A3-208ENST00000485194 SONP18583 2426 aaKnown RBP0.23□□□□□ -2.37
ATP13A3-208ENST00000485194 ZANQ9Y493 2812 aa0.23□□□□□ -2.37
ATP13A3-208ENST00000485194 PKD1P98161 4303 aa0.23□□□□□ -2.37
ATP13A3-208ENST00000485194 STAB2Q8WWQ8 2551 aa0.22□□□□□ -2.37
ATP13A3-208ENST00000485194 MXRA5Q9NR99 2828 aa0.22□□□□□ -2.37
ATP13A3-208ENST00000485194 FAM186AA6NE01 2351 aa0.22□□□□□ -2.37
ATP13A3-208ENST00000485194 SPRR2BP35325 72 aa0.22□□□□□ -2.37
ATP13A3-208ENST00000485194 POLR2KP53803 58 aaKnown RBP0.22□□□□□ -2.37
ATP13A3-208ENST00000485194 DEFB110Q30KQ9 67 aa0.22□□□□□ -2.37
ATP13A3-208ENST00000485194 MROH2BQ7Z745 1585 aa0.22□□□□□ -2.37
ATP13A3-208ENST00000485194 RANBP2P49792 3224 aaKnown RBP0.22□□□□□ -2.37
ATP13A3-208ENST00000485194 MACF1Q9UPN3 7388 aaKnown RBP0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 VPS13BQ7Z7G8 4022 aa0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 ACACBO00763 2458 aa0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 CCDC168Q8NDH2 2452 aa0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 DUOX1Q9NRD9 1551 aa0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 A8MTW9 85 aa0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 SNRPGP62308 76 aaKnown RBP0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 ITPR3Q14573 2671 aa0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 ITPR1Q14643 2758 aa0.21□□□□□ -2.38
ATP13A3-208ENST00000485194 TNP1P09430 55 aa0.2□□□□□ -2.38
ATP13A3-208ENST00000485194 RPL39P62891 51 aaKnown RBP0.2□□□□□ -2.38
ATP13A3-208ENST00000485194 USP9XQ93008 2570 aaPredicted RBP0.2□□□□□ -2.38
ATP13A3-208ENST00000485194 LPAP08519 4548 aa0.2□□□□□ -2.38
ATP13A3-208ENST00000485194 TLN2Q9Y4G6 2542 aa0.2□□□□□ -2.38
ATP13A3-208ENST00000485194 GCC2Q8IWJ2 1684 aa0.19□□□□□ -2.38
ATP13A3-208ENST00000485194 M0QZ58 72 aa0.19□□□□□ -2.38
ATP13A3-208ENST00000485194 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
ATP13A3-208ENST00000485194 CLPSL2Q6UWE3 100 aa0.19□□□□□ -2.38
ATP13A3-208ENST00000485194 HSPG2P98160 4391 aa0.19□□□□□ -2.38
ATP13A3-208ENST00000485194 LAMA1P25391 3075 aa0.19□□□□□ -2.38
ATP13A3-208ENST00000485194 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
ATP13A3-208ENST00000485194 SACSQ9NZJ4 4579 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms