RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 TACC2O95359 2948 aa6.64□□□□□ -1.35
TRIM27-205ENST00000481474 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
TRIM27-205ENST00000481474 ASH1LQ9NR48 2969 aaKnown RBP6.62□□□□□ -1.35
TRIM27-205ENST00000481474 LINC00472Q9H8W2 130 aa6.61□□□□□ -1.35
TRIM27-205ENST00000481474 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
TRIM27-205ENST00000481474 LRBAP50851 2863 aa6.59□□□□□ -1.35
TRIM27-205ENST00000481474 ZZEF1O43149 2961 aa6.59□□□□□ -1.36
TRIM27-205ENST00000481474 NSD1Q96L73 2696 aaPredicted RBP6.55□□□□□ -1.36
TRIM27-205ENST00000481474 DMXL1Q9Y485 3027 aa6.51□□□□□ -1.37
TRIM27-205ENST00000481474 LAMA5O15230 3695 aa6.51□□□□□ -1.37
TRIM27-205ENST00000481474 TNRC18O15417 2968 aaPredicted RBP6.51□□□□□ -1.37
TRIM27-205ENST00000481474 DCHS1Q96JQ0 3298 aa6.5□□□□□ -1.37
TRIM27-205ENST00000481474 NBEAL2Q6ZNJ1 2754 aa6.5□□□□□ -1.37
TRIM27-205ENST00000481474 IGSF10Q6WRI0 2623 aa6.49□□□□□ -1.37
TRIM27-205ENST00000481474 RELNP78509 3460 aa6.45□□□□□ -1.38
TRIM27-205ENST00000481474 NBEAQ8NFP9 2946 aa6.45□□□□□ -1.38
TRIM27-205ENST00000481474 GCN1Q92616 2671 aaKnown RBP6.45□□□□□ -1.38
TRIM27-205ENST00000481474 ZFHX4Q86UP3 3567 aa6.43□□□□□ -1.38
TRIM27-205ENST00000481474 SPRR1AP35321 89 aa6.43□□□□□ -1.38
TRIM27-205ENST00000481474 ZNF292O60281 2723 aa6.43□□□□□ -1.38
TRIM27-205ENST00000481474 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
TRIM27-205ENST00000481474 A6NN06 94 aa6.42□□□□□ -1.38
TRIM27-205ENST00000481474 DMDP11532 3685 aa6.39□□□□□ -1.39
TRIM27-205ENST00000481474 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
TRIM27-205ENST00000481474 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
TRIM27-205ENST00000481474 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
TRIM27-205ENST00000481474 CUBNO60494 3623 aa6.37□□□□□ -1.39
TRIM27-205ENST00000481474 NBPF19A0A087WUL8 3843 aa6.37□□□□□ -1.39
TRIM27-205ENST00000481474 UBR5O95071 2799 aaPredicted RBP6.35□□□□□ -1.39
TRIM27-205ENST00000481474 MUC3AQ02505 3323 aa6.33□□□□□ -1.4
TRIM27-205ENST00000481474 ITPR2Q14571 2701 aa6.32□□□□□ -1.4
TRIM27-205ENST00000481474 KRTAP13-2Q52LG2 175 aa6.31□□□□□ -1.4
TRIM27-205ENST00000481474 CSMD1Q96PZ7 3565 aa6.3□□□□□ -1.4
TRIM27-205ENST00000481474 ITPR1Q14643 2758 aa6.27□□□□□ -1.41
TRIM27-205ENST00000481474 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
TRIM27-205ENST00000481474 HIVEP1P15822 2718 aa6.26□□□□□ -1.41
TRIM27-205ENST00000481474 CELSR2Q9HCU4 2923 aa6.25□□□□□ -1.41
TRIM27-205ENST00000481474 UTP20O75691 2785 aaKnown RBP6.24□□□□□ -1.41
TRIM27-205ENST00000481474 FLNCQ14315 2725 aa6.24□□□□□ -1.41
TRIM27-205ENST00000481474 APCP25054 2843 aa6.24□□□□□ -1.41
TRIM27-205ENST00000481474 Q6ZRN7 208 aaPredicted RBP6.2□□□□□ -1.42
TRIM27-205ENST00000481474 ZFHX3Q15911 3703 aa6.2□□□□□ -1.42
TRIM27-205ENST00000481474 XP32Q5T750 250 aa6.17□□□□□ -1.42
TRIM27-205ENST00000481474 SPENQ96T58 3664 aaKnown RBP6.17□□□□□ -1.42
TRIM27-205ENST00000481474 DCHS2Q6V1P9 2916 aa6.16□□□□□ -1.42
TRIM27-205ENST00000481474 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
TRIM27-205ENST00000481474 SVEP1Q4LDE5 3571 aa6.13□□□□□ -1.43
TRIM27-205ENST00000481474 SMG1Q96Q15 3661 aaKnown RBP6.11□□□□□ -1.43
TRIM27-205ENST00000481474 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
TRIM27-205ENST00000481474 RPS29P62273 56 aaKnown RBP6.08□□□□□ -1.44
TRIM27-205ENST00000481474 CELSR1Q9NYQ6 3014 aa6.08□□□□□ -1.44
TRIM27-205ENST00000481474 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.446e-6■■□□□ 13.6
TRIM27-205ENST00000481474 TENM4Q6N022 2769 aa6.03□□□□□ -1.44
TRIM27-205ENST00000481474 FBN2P35556 2912 aa6.03□□□□□ -1.44
TRIM27-205ENST00000481474 CSMD2Q7Z408 3487 aa6.02□□□□□ -1.45
TRIM27-205ENST00000481474 PKD1L1Q8TDX9 2849 aa6.01□□□□□ -1.45
TRIM27-205ENST00000481474 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
TRIM27-205ENST00000481474 TENM1Q9UKZ4 2725 aa5.99□□□□□ -1.45
TRIM27-205ENST00000481474 ZANQ9Y493 2812 aa5.98□□□□□ -1.45
TRIM27-205ENST00000481474 H0YAA0 97 aa5.98□□□□□ -1.45
TRIM27-205ENST00000481474 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.46
TRIM27-205ENST00000481474 NF1P21359 2839 aa5.93□□□□□ -1.46
TRIM27-205ENST00000481474 VWFP04275 2813 aa5.93□□□□□ -1.46
TRIM27-205ENST00000481474 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
TRIM27-205ENST00000481474 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
TRIM27-205ENST00000481474 TENM3Q9P273 2699 aa5.83□□□□□ -1.48
TRIM27-205ENST00000481474 KRTAP13-1Q8IUC0 172 aa5.79□□□□□ -1.48
TRIM27-205ENST00000481474 PDZD2O15018 2839 aa5.79□□□□□ -1.48
TRIM27-205ENST00000481474 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
TRIM27-205ENST00000481474 TENM2Q9NT68 2774 aa5.77□□□□□ -1.49
TRIM27-205ENST00000481474 KRTAP13-3Q3SY46 172 aa5.76□□□□□ -1.49
TRIM27-205ENST00000481474 KRTAP1-4P0C5Y4 121 aa5.74□□□□□ -1.49
TRIM27-205ENST00000481474 LORP23490 312 aaPredicted RBP5.74□□□□□ -1.49
TRIM27-205ENST00000481474 HRNRQ86YZ3 2850 aaPredicted RBP5.7□□□□□ -1.5
TRIM27-205ENST00000481474 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
TRIM27-205ENST00000481474 FBN1P35555 2871 aaKnown RBP5.64□□□□□ -1.51
TRIM27-205ENST00000481474 KRTAP10-6P60371 365 aaPredicted RBP5.62□□□□□ -1.51
TRIM27-205ENST00000481474 MXRA5Q9NR99 2828 aa5.6□□□□□ -1.51
TRIM27-205ENST00000481474 VPS13CQ709C8 3753 aa5.59□□□□□ -1.51
TRIM27-205ENST00000481474 TGP01266 2768 aa5.55□□□□□ -1.52
TRIM27-205ENST00000481474 CSMD3Q7Z407 3707 aa5.53□□□□□ -1.52
TRIM27-205ENST00000481474 TRRAPQ9Y4A5 3859 aa5.52□□□□□ -1.53
TRIM27-205ENST00000481474 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
TRIM27-205ENST00000481474 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
TRIM27-205ENST00000481474 BSNQ9UPA5 3926 aa5.49□□□□□ -1.53
TRIM27-205ENST00000481474 COL7A1Q02388 2944 aa5.43□□□□□ -1.54
TRIM27-205ENST00000481474 MEGF8Q7Z7M0 2845 aa5.43□□□□□ -1.54
TRIM27-205ENST00000481474 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
TRIM27-205ENST00000481474 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
TRIM27-205ENST00000481474 OTOGQ6ZRI0 2925 aa5.3□□□□□ -1.56
TRIM27-205ENST00000481474 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
TRIM27-205ENST00000481474 ZNF469Q96JG9 3925 aaPredicted RBP5.26□□□□□ -1.57
TRIM27-205ENST00000481474 FBN3Q75N90 2809 aa5.25□□□□□ -1.57
TRIM27-205ENST00000481474 INE1O15225 51 aa5.24□□□□□ -1.57
TRIM27-205ENST00000481474 KRTAP4-5Q9BYR2 181 aa5.22□□□□□ -1.57
TRIM27-205ENST00000481474 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
TRIM27-205ENST00000481474 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
TRIM27-205ENST00000481474 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
TRIM27-205ENST00000481474 ANK3Q12955 4377 aaKnown RBP5.08□□□□□ -1.6
TRIM27-205ENST00000481474 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms