RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
TRIM27-205ENST00000481474 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
TRIM27-205ENST00000481474 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
TRIM27-205ENST00000481474 SUPT5HO00267 1087 aaKnown RBP18.58■□□□□ 0.57
TRIM27-205ENST00000481474 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
TRIM27-205ENST00000481474 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
TRIM27-205ENST00000481474 MYT1Q01538 1121 aa18.44■□□□□ 0.54
TRIM27-205ENST00000481474 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
TRIM27-205ENST00000481474 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
TRIM27-205ENST00000481474 ERICH6Q7L0X2 663 aa18.36■□□□□ 0.53
TRIM27-205ENST00000481474 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
TRIM27-205ENST00000481474 APLP2Q06481 763 aa18.27■□□□□ 0.52
TRIM27-205ENST00000481474 MYT1LQ9UL68 1186 aa18.19■□□□□ 0.5
TRIM27-205ENST00000481474 SHROOM4Q9ULL8 1493 aa18.05■□□□□ 0.48
TRIM27-205ENST00000481474 CNGB1Q14028 1251 aaPredicted RBP17.98■□□□□ 0.47
TRIM27-205ENST00000481474 POLR3GLQ9BT43 218 aa17.86■□□□□ 0.45
TRIM27-205ENST00000481474 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
TRIM27-205ENST00000481474 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
TRIM27-205ENST00000481474 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
TRIM27-205ENST00000481474 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
TRIM27-205ENST00000481474 YTHDC1Q96MU7 727 aaKnown RBP17.61■□□□□ 0.41
TRIM27-205ENST00000481474 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
TRIM27-205ENST00000481474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
TRIM27-205ENST00000481474 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
TRIM27-205ENST00000481474 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
TRIM27-205ENST00000481474 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
TRIM27-205ENST00000481474 NEFLP07196 543 aa17.37■□□□□ 0.37
TRIM27-205ENST00000481474 PPARGC1BQ86YN6 1023 aaKnown RBP17.31■□□□□ 0.36
TRIM27-205ENST00000481474 ITGAEP38570 1179 aa17.29■□□□□ 0.36
TRIM27-205ENST00000481474 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
TRIM27-205ENST00000481474 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
TRIM27-205ENST00000481474 BCANQ96GW7 911 aa17.18■□□□□ 0.34
TRIM27-205ENST00000481474 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
TRIM27-205ENST00000481474 A0A0G2JS52 829 aa17.04■□□□□ 0.32
TRIM27-205ENST00000481474 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
TRIM27-205ENST00000481474 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
TRIM27-205ENST00000481474 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
TRIM27-205ENST00000481474 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
TRIM27-205ENST00000481474 TULP1O00294 542 aaPredicted RBP16.84■□□□□ 0.29
TRIM27-205ENST00000481474 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
TRIM27-205ENST00000481474 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
TRIM27-205ENST00000481474 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
TRIM27-205ENST00000481474 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
TRIM27-205ENST00000481474 FBLN2P98095 1184 aa16.64■□□□□ 0.25
TRIM27-205ENST00000481474 RTL5Q5HYW3 569 aaPredicted RBP16.57■□□□□ 0.24
TRIM27-205ENST00000481474 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
TRIM27-205ENST00000481474 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
TRIM27-205ENST00000481474 TRIM52Q96A61 297 aa16.51■□□□□ 0.23
TRIM27-205ENST00000481474 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
TRIM27-205ENST00000481474 ESF1Q9H501 851 aaKnown RBP16.43■□□□□ 0.22
TRIM27-205ENST00000481474 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
TRIM27-205ENST00000481474 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
TRIM27-205ENST00000481474 NEUROD1Q13562 356 aa16.38■□□□□ 0.21
TRIM27-205ENST00000481474 ARXQ96QS3 562 aa16.37■□□□□ 0.21
TRIM27-205ENST00000481474 NEFMP07197 916 aa16.36■□□□□ 0.21
TRIM27-205ENST00000481474 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
TRIM27-205ENST00000481474 CDK11BP21127 795 aaKnown RBP16.35■□□□□ 0.21
TRIM27-205ENST00000481474 CDK11AQ9UQ88 783 aaPredicted RBP16.35■□□□□ 0.21
TRIM27-205ENST00000481474 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
TRIM27-205ENST00000481474 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
TRIM27-205ENST00000481474 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
TRIM27-205ENST00000481474 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
TRIM27-205ENST00000481474 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.19
TRIM27-205ENST00000481474 TPRNQ4KMQ1 711 aa16.18■□□□□ 0.18
TRIM27-205ENST00000481474 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
TRIM27-205ENST00000481474 HSP90AA1P07900 732 aaKnown RBP16.17■□□□□ 0.18
TRIM27-205ENST00000481474 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
TRIM27-205ENST00000481474 NPHP1O15259 732 aa16.15■□□□□ 0.18
TRIM27-205ENST00000481474 ZNF777Q9ULD5 760 aaPredicted RBP16.09■□□□□ 0.17
TRIM27-205ENST00000481474 SALL2Q9Y467 1007 aaPredicted RBP16.09■□□□□ 0.17
TRIM27-205ENST00000481474 CLSTN1O94985 981 aa16.09■□□□□ 0.17
TRIM27-205ENST00000481474 PRM3Q9NNZ6 103 aa16.07■□□□□ 0.16
TRIM27-205ENST00000481474 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.04■□□□□ 0.16
TRIM27-205ENST00000481474 ANO8Q9HCE9 1232 aaPredicted RBP15.96■□□□□ 0.15
TRIM27-205ENST00000481474 TRIM26Q12899 539 aaPredicted RBP15.94■□□□□ 0.14
TRIM27-205ENST00000481474 P3H3Q8IVL6 736 aa15.94■□□□□ 0.14
TRIM27-205ENST00000481474 ANP32BQ92688 251 aaKnown RBP15.93■□□□□ 0.14
TRIM27-205ENST00000481474 LMOD2Q6P5Q4 547 aa15.92■□□□□ 0.14
TRIM27-205ENST00000481474 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
TRIM27-205ENST00000481474 KRI1Q8N9T8 703 aaKnown RBP15.89■□□□□ 0.13
TRIM27-205ENST00000481474 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
TRIM27-205ENST00000481474 ISY1Q9ULR0 285 aaKnown RBP15.88■□□□□ 0.13
TRIM27-205ENST00000481474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.134e-8■□□□□ 10.2
TRIM27-205ENST00000481474 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
TRIM27-205ENST00000481474 PDE4CQ08493 712 aa15.8■□□□□ 0.12
TRIM27-205ENST00000481474 LOC105371045A0A1W2PR82 267 aa15.79■□□□□ 0.12
TRIM27-205ENST00000481474 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRIM27-205ENST00000481474 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRIM27-205ENST00000481474 ANP32CO43423 234 aa15.76■□□□□ 0.11
TRIM27-205ENST00000481474 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
TRIM27-205ENST00000481474 HRCP23327 699 aa15.73■□□□□ 0.11
TRIM27-205ENST00000481474 NBR1Q14596 966 aa15.72■□□□□ 0.11
TRIM27-205ENST00000481474 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
TRIM27-205ENST00000481474 GLIPR1L2Q4G1C9 344 aa15.7■□□□□ 0.1
TRIM27-205ENST00000481474 NAP1L2Q9ULW6 460 aaPredicted RBP15.66■□□□□ 0.1
TRIM27-205ENST00000481474 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
TRIM27-205ENST00000481474 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
TRIM27-205ENST00000481474 NISCHQ9Y2I1 1504 aa15.65■□□□□ 0.1
TRIM27-205ENST00000481474 ANP32AP39687 249 aaKnown RBP15.65■□□□□ 0.1
TRIM27-205ENST00000481474 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms