RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 FLNCQ14315 2725 aa9.59□□□□□ -0.87
LPCAT1-202ENST00000475622 UNC80Q8N2C7 3258 aa9.57□□□□□ -0.88
LPCAT1-202ENST00000475622 TENM4Q6N022 2769 aa9.56□□□□□ -0.88
LPCAT1-202ENST00000475622 ATMQ13315 3056 aa9.54□□□□□ -0.88
LPCAT1-202ENST00000475622 CELSR3Q9NYQ7 3312 aa9.51□□□□□ -0.89
LPCAT1-202ENST00000475622 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.892e-6■■■■■ 44.5
LPCAT1-202ENST00000475622 COL12A1Q99715 3063 aa9.48□□□□□ -0.89
LPCAT1-202ENST00000475622 NBEAQ8NFP9 2946 aa9.46□□□□□ -0.89
LPCAT1-202ENST00000475622 CELSR2Q9HCU4 2923 aa9.46□□□□□ -0.89
LPCAT1-202ENST00000475622 PP632Q6XCG6 107 aa9.45□□□□□ -0.9
LPCAT1-202ENST00000475622 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
LPCAT1-202ENST00000475622 KRTAP10-8P60410 259 aa9.42□□□□□ -0.9
LPCAT1-202ENST00000475622 LAMA1P25391 3075 aa9.42□□□□□ -0.9
LPCAT1-202ENST00000475622 KRTAP1-4P0C5Y4 121 aa9.42□□□□□ -0.9
LPCAT1-202ENST00000475622 XP32Q5T750 250 aa9.42□□□□□ -0.9
LPCAT1-202ENST00000475622 LRBAP50851 2863 aa9.41□□□□□ -0.9
LPCAT1-202ENST00000475622 H0YAA0 97 aa9.39□□□□□ -0.91
LPCAT1-202ENST00000475622 ADGRG4Q8IZF6 3080 aa9.37□□□□□ -0.91
LPCAT1-202ENST00000475622 A0A1B0GVY2 172 aa9.36□□□□□ -0.91
LPCAT1-202ENST00000475622 FRYLO94915 3013 aa9.35□□□□□ -0.91
LPCAT1-202ENST00000475622 BOD1L1Q8NFC6 3051 aa9.32□□□□□ -0.92
LPCAT1-202ENST00000475622 TENM3Q9P273 2699 aa9.31□□□□□ -0.92
LPCAT1-202ENST00000475622 P0C880 135 aa9.31□□□□□ -0.92
LPCAT1-202ENST00000475622 DCHS2Q6V1P9 2916 aa9.31□□□□□ -0.92
LPCAT1-202ENST00000475622 ZZEF1O43149 2961 aa9.25□□□□□ -0.93
LPCAT1-202ENST00000475622 CDH23Q9H251 3354 aa9.24□□□□□ -0.93
LPCAT1-202ENST00000475622 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
LPCAT1-202ENST00000475622 CFAP47Q6ZTR5 3102 aa9.2□□□□□ -0.94
LPCAT1-202ENST00000475622 VCANP13611 3396 aa9.16□□□□□ -0.94
LPCAT1-202ENST00000475622 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
LPCAT1-202ENST00000475622 TENM1Q9UKZ4 2725 aa9.15□□□□□ -0.95
LPCAT1-202ENST00000475622 KRTAP10-10P60014 251 aa9.13□□□□□ -0.95
LPCAT1-202ENST00000475622 COL6A3P12111 3177 aa9.13□□□□□ -0.95
LPCAT1-202ENST00000475622 ZANQ9Y493 2812 aa9.12□□□□□ -0.95
LPCAT1-202ENST00000475622 NF1P21359 2839 aa9.11□□□□□ -0.95
LPCAT1-202ENST00000475622 DNAH14Q0VDD8 3507 aa9.08□□□□□ -0.96
LPCAT1-202ENST00000475622 KRTAP13-3Q3SY46 172 aa9.05□□□□□ -0.96
LPCAT1-202ENST00000475622 TGP01266 2768 aa9.02□□□□□ -0.97
LPCAT1-202ENST00000475622 PRO2289Q9P1D8 64 aa9.01□□□□□ -0.97
LPCAT1-202ENST00000475622 SZT2Q5T011 3432 aa8.99□□□□□ -0.97
LPCAT1-202ENST00000475622 EYSQ5T1H1 3165 aa8.98□□□□□ -0.97
LPCAT1-202ENST00000475622 TENM2Q9NT68 2774 aa8.93□□□□□ -0.98
LPCAT1-202ENST00000475622 FBN2P35556 2912 aa8.93□□□□□ -0.98
LPCAT1-202ENST00000475622 TNRC18O15417 2968 aaPredicted RBP8.87□□□□□ -0.99
LPCAT1-202ENST00000475622 SPEGQ15772 3267 aa8.83□□□□□ -1
LPCAT1-202ENST00000475622 KRTAP12-2P59991 146 aa8.82□□□□□ -1
LPCAT1-202ENST00000475622 PDZD2O15018 2839 aa8.8□□□□□ -1
LPCAT1-202ENST00000475622 HRNRQ86YZ3 2850 aaPredicted RBP8.8□□□□□ -1
LPCAT1-202ENST00000475622 PKD1L1Q8TDX9 2849 aa8.79□□□□□ -1
LPCAT1-202ENST00000475622 CELSR1Q9NYQ6 3014 aa8.75□□□□□ -1.01
LPCAT1-202ENST00000475622 VWFP04275 2813 aa8.68□□□□□ -1.02
LPCAT1-202ENST00000475622 KRTAP13-4Q3LI77 160 aa8.67□□□□□ -1.02
LPCAT1-202ENST00000475622 DMXL1Q9Y485 3027 aa8.66□□□□□ -1.02
LPCAT1-202ENST00000475622 USP34Q70CQ2 3546 aa8.65□□□□□ -1.02
LPCAT1-202ENST00000475622 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
LPCAT1-202ENST00000475622 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.04
LPCAT1-202ENST00000475622 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
LPCAT1-202ENST00000475622 MYO15AQ9UKN7 3530 aa8.52□□□□□ -1.05
LPCAT1-202ENST00000475622 SPTBN5Q9NRC6 3674 aaKnown RBP8.48□□□□□ -1.05
LPCAT1-202ENST00000475622 LOC400499M0QZD8 3231 aa8.47□□□□□ -1.05
LPCAT1-202ENST00000475622 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
LPCAT1-202ENST00000475622 KRTAP15-1Q3LI76 137 aa8.38□□□□□ -1.07
LPCAT1-202ENST00000475622 KRTAP10-6P60371 365 aaPredicted RBP8.32□□□□□ -1.08
LPCAT1-202ENST00000475622 DCHS1Q96JQ0 3298 aa8.3□□□□□ -1.08
LPCAT1-202ENST00000475622 WDFY3Q8IZQ1 3526 aa8.26□□□□□ -1.09
LPCAT1-202ENST00000475622 FBN1P35555 2871 aaKnown RBP8.2□□□□□ -1.1
LPCAT1-202ENST00000475622 FBN3Q75N90 2809 aa8.17□□□□□ -1.1
LPCAT1-202ENST00000475622 RELNP78509 3460 aa8.15□□□□□ -1.1
LPCAT1-202ENST00000475622 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
LPCAT1-202ENST00000475622 ZFHX4Q86UP3 3567 aa8.09□□□□□ -1.11
LPCAT1-202ENST00000475622 COL7A1Q02388 2944 aa8.02□□□□□ -1.12
LPCAT1-202ENST00000475622 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
LPCAT1-202ENST00000475622 INE1O15225 51 aa7.96□□□□□ -1.13
LPCAT1-202ENST00000475622 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
LPCAT1-202ENST00000475622 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
LPCAT1-202ENST00000475622 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
LPCAT1-202ENST00000475622 ASPMQ8IZT6 3477 aa7.92□□□□□ -1.14
LPCAT1-202ENST00000475622 CRCT1Q9UGL9 99 aa7.91□□□□□ -1.14
LPCAT1-202ENST00000475622 NBPF19A0A087WUL8 3843 aa7.88□□□□□ -1.15
LPCAT1-202ENST00000475622 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
LPCAT1-202ENST00000475622 CSMD1Q96PZ7 3565 aa7.84□□□□□ -1.15
LPCAT1-202ENST00000475622 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
LPCAT1-202ENST00000475622 LAMA5O15230 3695 aa7.75□□□□□ -1.17
LPCAT1-202ENST00000475622 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
LPCAT1-202ENST00000475622 SMG1Q96Q15 3661 aaKnown RBP7.69□□□□□ -1.18
LPCAT1-202ENST00000475622 DMDP11532 3685 aa7.68□□□□□ -1.18
LPCAT1-202ENST00000475622 KRTAP10-4P60372 401 aaPredicted RBP7.64□□□□□ -1.19
LPCAT1-202ENST00000475622 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
LPCAT1-202ENST00000475622 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
LPCAT1-202ENST00000475622 ANK3Q12955 4377 aaKnown RBP7.61□□□□□ -1.19
LPCAT1-202ENST00000475622 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
LPCAT1-202ENST00000475622 MUC3AQ02505 3323 aa7.58□□□□□ -1.2
LPCAT1-202ENST00000475622 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
LPCAT1-202ENST00000475622 SVEP1Q4LDE5 3571 aa7.53□□□□□ -1.2
LPCAT1-202ENST00000475622 CUBNO60494 3623 aa7.52□□□□□ -1.2
LPCAT1-202ENST00000475622 TRRAPQ9Y4A5 3859 aa7.49□□□□□ -1.21
LPCAT1-202ENST00000475622 CSMD2Q7Z408 3487 aa7.45□□□□□ -1.22
LPCAT1-202ENST00000475622 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
LPCAT1-202ENST00000475622 SPENQ96T58 3664 aaKnown RBP7.33□□□□□ -1.24
LPCAT1-202ENST00000475622 HUWE1Q7Z6Z7 4374 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms