RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ACACBO00763 2458 aa-1.08□□□□□ -2.58
LTN1-204ENST00000475344 MAP3K1Q13233 1512 aa-1.08□□□□□ -2.58
LTN1-204ENST00000475344 SMR3BP02814 79 aaPredicted RBP-1.08□□□□□ -2.58
LTN1-204ENST00000475344 MYO9AB2RTY4 2548 aa-1.08□□□□□ -2.58
LTN1-204ENST00000475344 CCNB3Q8WWL7 1395 aa-1.08□□□□□ -2.58
LTN1-204ENST00000475344 ATMQ13315 3056 aa-1.09□□□□□ -2.58
LTN1-204ENST00000475344 NDUFB1O75438 58 aa-1.09□□□□□ -2.58
LTN1-204ENST00000475344 MT1FP04733 61 aa-1.09□□□□□ -2.58
LTN1-204ENST00000475344 KRTAP8-1Q8IUC2 63 aa-1.09□□□□□ -2.58
LTN1-204ENST00000475344 S4R3F8 94 aa-1.09□□□□□ -2.58
LTN1-204ENST00000475344 TLN2Q9Y4G6 2542 aa-1.1□□□□□ -2.58
LTN1-204ENST00000475344 CENPEQ02224 2701 aa-1.1□□□□□ -2.59
LTN1-204ENST00000475344 ACYP1P07311 99 aa-1.1□□□□□ -2.59
LTN1-204ENST00000475344 DEFB110Q30KQ9 67 aa-1.1□□□□□ -2.59
LTN1-204ENST00000475344 V9GYS6 101 aa-1.1□□□□□ -2.59
LTN1-204ENST00000475344 KIF14Q15058 1648 aa-1.11□□□□□ -2.59
LTN1-204ENST00000475344 DDX60LQ5H9U9 1706 aaKnown RBP-1.11□□□□□ -2.59
LTN1-204ENST00000475344 SPTBN5Q9NRC6 3674 aaKnown RBP-1.11□□□□□ -2.59
LTN1-204ENST00000475344 ABCC3O15438 1527 aa-1.11□□□□□ -2.59
LTN1-204ENST00000475344 FREM2Q5SZK8 3169 aa-1.12□□□□□ -2.59
LTN1-204ENST00000475344 URB2Q14146 1524 aaKnown RBP-1.12□□□□□ -2.59
LTN1-204ENST00000475344 PIK3C2BO00750 1634 aa-1.13□□□□□ -2.59
LTN1-204ENST00000475344 DEPDC5O75140 1603 aa-1.13□□□□□ -2.59
LTN1-204ENST00000475344 PVALEFA0A1B0GWK0 134 aa-1.13□□□□□ -2.59
LTN1-204ENST00000475344 TTC37Q6PGP7 1564 aa-1.13□□□□□ -2.59
LTN1-204ENST00000475344 DIP2BQ9P265 1576 aa-1.13□□□□□ -2.59
LTN1-204ENST00000475344 LRBAP50851 2863 aa-1.14□□□□□ -2.59
LTN1-204ENST00000475344 MAP3K4Q9Y6R4 1608 aa-1.14□□□□□ -2.59
LTN1-204ENST00000475344 LCE6AA0A183 80 aa-1.14□□□□□ -2.59
LTN1-204ENST00000475344 IFI6P09912 130 aa-1.14□□□□□ -2.59
LTN1-204ENST00000475344 PRLHP81277 87 aa-1.14□□□□□ -2.59
LTN1-204ENST00000475344 TDRG1Q3Y452 100 aa-1.14□□□□□ -2.59
LTN1-204ENST00000475344 PLCH1Q4KWH8 1693 aa-1.14□□□□□ -2.59
LTN1-204ENST00000475344 MAGI3Q5TCQ9 1506 aa-1.15□□□□□ -2.59
LTN1-204ENST00000475344 SPEGQ15772 3267 aa-1.15□□□□□ -2.59
LTN1-204ENST00000475344 UMAD1C9J7I0 102 aa-1.15□□□□□ -2.59
LTN1-204ENST00000475344 IFI27P40305 119 aaPredicted RBP-1.15□□□□□ -2.59
LTN1-204ENST00000475344 DEFB130BP0DP73 79 aa-1.16□□□□□ -2.6
LTN1-204ENST00000475344 DEFB130AP0DP74 79 aa-1.16□□□□□ -2.6
LTN1-204ENST00000475344 EP400Q96L91 3159 aa-1.16□□□□□ -2.6
LTN1-204ENST00000475344 DMDP11532 3685 aa-1.17□□□□□ -2.6
LTN1-204ENST00000475344 CDC42BPGQ6DT37 1551 aa-1.17□□□□□ -2.6
LTN1-204ENST00000475344 LYNX1G3V0Z9 82 aa-1.17□□□□□ -2.6
LTN1-204ENST00000475344 VPS13CQ709C8 3753 aa-1.18□□□□□ -2.6
LTN1-204ENST00000475344 NDUFA4O00483 81 aa-1.18□□□□□ -2.6
LTN1-204ENST00000475344 WDFY4Q6ZS81 3184 aa-1.18□□□□□ -2.6
LTN1-204ENST00000475344 LOC400499M0QZD8 3231 aa-1.19□□□□□ -2.6
LTN1-204ENST00000475344 CEP350Q5VT06 3117 aa-1.19□□□□□ -2.6
LTN1-204ENST00000475344 MGAQ8IWI9 3026 aa-1.19□□□□□ -2.6
LTN1-204ENST00000475344 TJP1Q07157 1748 aa-1.2□□□□□ -2.6
LTN1-204ENST00000475344 CDC42BPAQ5VT25 1732 aa-1.2□□□□□ -2.6
LTN1-204ENST00000475344 KANTRA0A1W2PQU2 76 aa-1.2□□□□□ -2.6
LTN1-204ENST00000475344 IAPPP10997 89 aa-1.2□□□□□ -2.6
LTN1-204ENST00000475344 ITSN1Q15811 1721 aa-1.2□□□□□ -2.6
LTN1-204ENST00000475344 RICTORQ6R327 1708 aa-1.2□□□□□ -2.6
LTN1-204ENST00000475344 CRYBG3Q68DQ2 2970 aa-1.21□□□□□ -2.6
LTN1-204ENST00000475344 NREPQ16612 68 aa-1.21□□□□□ -2.6
LTN1-204ENST00000475344 CFAP43Q8NDM7 1665 aa-1.21□□□□□ -2.6
LTN1-204ENST00000475344 ANKRD36CQ5JPF3 1778 aa-1.21□□□□□ -2.6
LTN1-204ENST00000475344 WDFY3Q8IZQ1 3526 aa-1.22□□□□□ -2.6
LTN1-204ENST00000475344 CCDC88BA6NC98 1476 aa-1.22□□□□□ -2.6
LTN1-204ENST00000475344 RPS29P62273 56 aaKnown RBP-1.23□□□□□ -2.61
LTN1-204ENST00000475344 DCHS1Q96JQ0 3298 aa-1.23□□□□□ -2.61
LTN1-204ENST00000475344 SPTAN1Q13813 2472 aaKnown RBP-1.24□□□□□ -2.61
LTN1-204ENST00000475344 CLPSL2Q6UWE3 100 aa-1.24□□□□□ -2.61
LTN1-204ENST00000475344 DEFB106AQ8N104 65 aa-1.24□□□□□ -2.61
LTN1-204ENST00000475344 UACAQ9BZF9 1416 aa-1.24□□□□□ -2.61
LTN1-204ENST00000475344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.25□□□□□ -2.61
LTN1-204ENST00000475344 MKI67P46013 3256 aaKnown RBP-1.25□□□□□ -2.61
LTN1-204ENST00000475344 DEFB4AO15263 64 aa-1.25□□□□□ -2.61
LTN1-204ENST00000475344 MUC3AQ02505 3323 aa-1.25□□□□□ -2.61
LTN1-204ENST00000475344 A0A087WXM4 84 aa-1.26□□□□□ -2.61
LTN1-204ENST00000475344 DEFB121Q5J5C9 76 aa-1.26□□□□□ -2.61
LTN1-204ENST00000475344 ATP5EP2Q5VTU8 51 aa-1.26□□□□□ -2.61
LTN1-204ENST00000475344 CFAP54Q96N23 3096 aa-1.27□□□□□ -2.61
LTN1-204ENST00000475344 SMIM13P0DJ93 91 aa-1.27□□□□□ -2.61
LTN1-204ENST00000475344 VCANP13611 3396 aa-1.27□□□□□ -2.61
LTN1-204ENST00000475344 PARP4Q9UKK3 1724 aaKnown RBP-1.28□□□□□ -2.61
LTN1-204ENST00000475344 ZC3H13Q5T200 1668 aaKnown RBP-1.28□□□□□ -2.61
LTN1-204ENST00000475344 DEFB131BA0A096LNP1 70 aa-1.28□□□□□ -2.61
LTN1-204ENST00000475344 ST20Q9HBF5 79 aa-1.28□□□□□ -2.61
LTN1-204ENST00000475344 SZT2Q5T011 3432 aa-1.28□□□□□ -2.61
LTN1-204ENST00000475344 HMGA1P17096 107 aaKnown RBP-1.29□□□□□ -2.62
LTN1-204ENST00000475344 TOGARAM1Q9Y4F4 1720 aa-1.3□□□□□ -2.62
LTN1-204ENST00000475344 LY75O60449 1722 aa-1.31□□□□□ -2.62
LTN1-204ENST00000475344 H3BUT2 72 aa-1.31□□□□□ -2.62
LTN1-204ENST00000475344 ADIRFQ15847 76 aa-1.31□□□□□ -2.62
LTN1-204ENST00000475344 TNP1P09430 55 aa-1.32□□□□□ -2.62
LTN1-204ENST00000475344 CRIP1P50238 77 aa-1.32□□□□□ -2.62
LTN1-204ENST00000475344 ASXL1Q8IXJ9 1541 aa-1.32□□□□□ -2.62
LTN1-204ENST00000475344 UNC80Q8N2C7 3258 aa-1.32□□□□□ -2.62
LTN1-204ENST00000475344 FRYLO94915 3013 aa-1.33□□□□□ -2.62
LTN1-204ENST00000475344 KDM5DQ9BY66 1539 aa-1.33□□□□□ -2.62
LTN1-204ENST00000475344 GNG2P59768 71 aa-1.33□□□□□ -2.62
LTN1-204ENST00000475344 USP34Q70CQ2 3546 aa-1.33□□□□□ -2.62
LTN1-204ENST00000475344 RNF17Q9BXT8 1623 aaKnown RBP-1.33□□□□□ -2.62
LTN1-204ENST00000475344 ITSN2Q9NZM3 1697 aa-1.34□□□□□ -2.62
LTN1-204ENST00000475344 THOC2Q8NI27 1593 aaKnown RBP-1.34□□□□□ -2.62
LTN1-204ENST00000475344 ARHGAP35Q9NRY4 1499 aa-1.35□□□□□ -2.63
LTN1-204ENST00000475344 MRPL33O75394 65 aaKnown RBP-1.35□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms