RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 PRKDCP78527 4128 aaKnown RBP-0.08□□□□□ -2.42
VBP1-202ENST00000460509 SETXQ7Z333 2677 aaKnown RBP-0.08□□□□□ -2.42
VBP1-202ENST00000460509 PDE4DIPQ5VU43 2346 aa-0.09□□□□□ -2.42
VBP1-202ENST00000460509 TNRC18O15417 2968 aaPredicted RBP-0.09□□□□□ -2.42
VBP1-202ENST00000460509 KRTAP20-1Q3LI63 56 aa-0.09□□□□□ -2.42
VBP1-202ENST00000460509 TMEM167BQ9NRX6 74 aa-0.09□□□□□ -2.42
VBP1-202ENST00000460509 LMO7Q8WWI1 1683 aa-0.09□□□□□ -2.42
VBP1-202ENST00000460509 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
VBP1-202ENST00000460509 SPTBN4Q9H254 2564 aa-0.09□□□□□ -2.42
VBP1-202ENST00000460509 FAT3Q8TDW7 4589 aa-0.09□□□□□ -2.42
VBP1-202ENST00000460509 HERC2O95714 4834 aa-0.1□□□□□ -2.43
VBP1-202ENST00000460509 APC2O95996 2303 aa-0.1□□□□□ -2.43
VBP1-202ENST00000460509 H3BUA1 57 aa-0.1□□□□□ -2.43
VBP1-202ENST00000460509 MT1AP04731 61 aa-0.1□□□□□ -2.43
VBP1-202ENST00000460509 EFCAB6Q5THR3 1501 aa-0.1□□□□□ -2.43
VBP1-202ENST00000460509 DNHD1Q96M86 4753 aa-0.1□□□□□ -2.43
VBP1-202ENST00000460509 BIRC6Q9NR09 4857 aa-0.1□□□□□ -2.43
VBP1-202ENST00000460509 ABCC8Q09428 1581 aa-0.11□□□□□ -2.43
VBP1-202ENST00000460509 DSPP15924 2871 aaKnown RBP-0.11□□□□□ -2.43
VBP1-202ENST00000460509 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
VBP1-202ENST00000460509 IGLV5-48A0A075B6I7 105 aa-0.11□□□□□ -2.43
VBP1-202ENST00000460509 LINC00308Q8TCZ7 52 aa-0.11□□□□□ -2.43
VBP1-202ENST00000460509 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.11□□□□□ -2.43
VBP1-202ENST00000460509 STARD9Q9P2P6 4700 aa-0.11□□□□□ -2.43
VBP1-202ENST00000460509 HECTD4Q9Y4D8 3996 aa-0.11□□□□□ -2.43
VBP1-202ENST00000460509 WNK1Q9H4A3 2382 aa-0.11□□□□□ -2.43
VBP1-202ENST00000460509 KIF21BO75037 1637 aa-0.12□□□□□ -2.43
VBP1-202ENST00000460509 KRTAP20-2Q3LI61 65 aa-0.12□□□□□ -2.43
VBP1-202ENST00000460509 COL12A1Q99715 3063 aa-0.12□□□□□ -2.43
VBP1-202ENST00000460509 LAMA3Q16787 3333 aa-0.12□□□□□ -2.43
VBP1-202ENST00000460509 PRRC2CQ9Y520 2896 aaKnown RBP-0.12□□□□□ -2.43
VBP1-202ENST00000460509 SPRR2FQ96RM1 72 aa-0.13□□□□□ -2.43
VBP1-202ENST00000460509 LRP2P98164 4655 aa-0.13□□□□□ -2.43
VBP1-202ENST00000460509 H0YGX0 51 aa-0.14□□□□□ -2.43
VBP1-202ENST00000460509 KRTAP6-1Q3LI64 71 aa-0.14□□□□□ -2.43
VBP1-202ENST00000460509 FAT1Q14517 4588 aa-0.14□□□□□ -2.43
VBP1-202ENST00000460509 A0A1B0GUL6 1792 aa-0.14□□□□□ -2.43
VBP1-202ENST00000460509 MAP1BP46821 2468 aaKnown RBP-0.14□□□□□ -2.43
VBP1-202ENST00000460509 IQGAP1P46940 1657 aa-0.14□□□□□ -2.43
VBP1-202ENST00000460509 SVEP1Q4LDE5 3571 aa-0.15□□□□□ -2.43
VBP1-202ENST00000460509 PLNP26678 52 aa-0.15□□□□□ -2.43
VBP1-202ENST00000460509 CREBBPQ92793 2442 aa-0.15□□□□□ -2.43
VBP1-202ENST00000460509 LRP1BQ9NZR2 4599 aa-0.15□□□□□ -2.43
VBP1-202ENST00000460509 STAB2Q8WWQ8 2551 aa-0.15□□□□□ -2.43
VBP1-202ENST00000460509 HIVEP1P15822 2718 aa-0.15□□□□□ -2.43
VBP1-202ENST00000460509 HECTD1Q9ULT8 2610 aa-0.16□□□□□ -2.43
VBP1-202ENST00000460509 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.16□□□□□ -2.43
VBP1-202ENST00000460509 DCHS2Q6V1P9 2916 aa-0.16□□□□□ -2.43
VBP1-202ENST00000460509 SONP18583 2426 aaKnown RBP-0.16□□□□□ -2.43
VBP1-202ENST00000460509 SETD2Q9BYW2 2564 aaPredicted RBP-0.16□□□□□ -2.43
VBP1-202ENST00000460509 FAM208AQ9UK61 1670 aaKnown RBP-0.16□□□□□ -2.44
VBP1-202ENST00000460509 MT4P47944 62 aa-0.17□□□□□ -2.44
VBP1-202ENST00000460509 NOP10Q9NPE3 64 aaKnown RBP-0.17□□□□□ -2.44
VBP1-202ENST00000460509 ZANQ9Y493 2812 aa-0.17□□□□□ -2.44
VBP1-202ENST00000460509 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
VBP1-202ENST00000460509 LYSTQ99698 3801 aa-0.18□□□□□ -2.44
VBP1-202ENST00000460509 KRTAP19-7Q3SYF9 63 aa-0.18□□□□□ -2.44
VBP1-202ENST00000460509 CMC2Q9NRP2 79 aa-0.18□□□□□ -2.44
VBP1-202ENST00000460509 CELSR3Q9NYQ7 3312 aa-0.18□□□□□ -2.44
VBP1-202ENST00000460509 RIF1Q5UIP0 2472 aaKnown RBP-0.18□□□□□ -2.44
VBP1-202ENST00000460509 TENM2Q9NT68 2774 aa-0.18□□□□□ -2.44
VBP1-202ENST00000460509 NBASA2RRP1 2371 aa-0.19□□□□□ -2.44
VBP1-202ENST00000460509 LAMA5O15230 3695 aa-0.19□□□□□ -2.44
VBP1-202ENST00000460509 SRRM2Q9UQ35 2752 aaKnown RBP-0.19□□□□□ -2.44
VBP1-202ENST00000460509 DEFB110Q30KQ9 67 aa-0.2□□□□□ -2.44
VBP1-202ENST00000460509 KRTAP19-6Q3LI70 58 aa-0.2□□□□□ -2.44
VBP1-202ENST00000460509 KAAG1Q9UBP8 84 aa-0.2□□□□□ -2.44
VBP1-202ENST00000460509 MYO15AQ9UKN7 3530 aa-0.21□□□□□ -2.44
VBP1-202ENST00000460509 MMP24-AS1A0A0U1RRL7 71 aa-0.21□□□□□ -2.44
VBP1-202ENST00000460509 CUBNO60494 3623 aa-0.21□□□□□ -2.44
VBP1-202ENST00000460509 FLGP20930 4061 aaPredicted RBP-0.21□□□□□ -2.44
VBP1-202ENST00000460509 DOPEY1Q5JWR5 2465 aa-0.22□□□□□ -2.44
VBP1-202ENST00000460509 ZFHX4Q86UP3 3567 aa-0.22□□□□□ -2.44
VBP1-202ENST00000460509 FLNAP21333 2647 aaKnown RBP-0.22□□□□□ -2.44
VBP1-202ENST00000460509 ABRACLQ9P1F3 81 aa-0.22□□□□□ -2.44
VBP1-202ENST00000460509 PKHD1P08F94 4074 aa-0.22□□□□□ -2.44
VBP1-202ENST00000460509 NBEAL2Q6ZNJ1 2754 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 NFAT5O94916 1531 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 DNAH1Q9P2D7 4330 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 COL6A5A8TX70 2615 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 PKD1P98161 4303 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 SMIM27A0A1W2PRY6 76 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 LINC01546A6NGU7 62 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 M0QY20 66 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 PDZD2O15018 2839 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 SRCAPQ6ZRS2 3230 aa-0.23□□□□□ -2.45
VBP1-202ENST00000460509 LAMA1P25391 3075 aa-0.24□□□□□ -2.45
VBP1-202ENST00000460509 DDX60Q8IY21 1712 aaKnown RBP-0.24□□□□□ -2.45
VBP1-202ENST00000460509 TNP1P09430 55 aa-0.24□□□□□ -2.45
VBP1-202ENST00000460509 KRTAP19-8Q3LI54 63 aa-0.24□□□□□ -2.45
VBP1-202ENST00000460509 WFDC10BQ8IUB3 73 aa-0.24□□□□□ -2.45
VBP1-202ENST00000460509 EP400Q96L91 3159 aa-0.24□□□□□ -2.45
VBP1-202ENST00000460509 UNC80Q8N2C7 3258 aa-0.24□□□□□ -2.45
VBP1-202ENST00000460509 CEP290O15078 2479 aa-0.24□□□□□ -2.45
VBP1-202ENST00000460509 CSMD1Q96PZ7 3565 aa-0.24□□□□□ -2.45
VBP1-202ENST00000460509 TEP1Q99973 2627 aaKnown RBP-0.24□□□□□ -2.45
VBP1-202ENST00000460509 MAP1AP78559 2803 aaPredicted RBP-0.24□□□□□ -2.45
VBP1-202ENST00000460509 PLECQ15149 4684 aaKnown RBP-0.25□□□□□ -2.45
VBP1-202ENST00000460509 SNRPGP15A8MWD9 76 aa-0.25□□□□□ -2.45
VBP1-202ENST00000460509 NF1P21359 2839 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms